KEGG   Varroa jacobsoni: 111261237
Entry
111261237         CDS       T07417                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
vja  Varroa jacobsoni
Pathway
vja03013  Nucleocytoplasmic transport
vja04141  Protein processing in endoplasmic reticulum
vja04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:vja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111261237
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111261237
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    111261237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vja03019]
    111261237
   04131 Membrane trafficking [BR:vja04131]
    111261237
Messenger RNA biogenesis [BR:vja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111261237
Membrane trafficking [BR:vja04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    111261237
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111261237
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111261237
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_NOL10_N NBCH_WD40 Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 111261237
NCBI-ProteinID: XP_022690298
LinkDB
Position
Unknown
AA seq 335 aa
MTTVVNTVDTSHEDMIHDCQMDFFGTRLATCSSDMSVKVFDLRGGNQKLVADLRGHEGPV
WQISWAHPMFGSLLASCSYDRRVIIWRENAGQWTQWHEFKSHDSSVNAVQFAPYECGLMF
AAASSDGSVSILSSGNNGATWDLSKITGAHLMGVNSVSWAPYVAPCSLFDNVDHQIGDAN
SDHQNGGAPGRPYMRLVTGGSDNLVKIWKYSEDQSSWVEEQSLEAHQDWVRDVAWCPSAA
FSNCSMIASCSQDRTVIIWTSNDGNKTWKGQVLNTFDDVIWHVSWSLNGDMLAVSGGDNK
ITLWKCSPDHRWICISEDGGRKIRGQTPHPADRTL
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgacgaccgtggttaacacggtagacaccagccatgaagacatgattcacgactgtcag
atggacttcttcggaactcgtctagcaacatgttcgtcggatatgagcgtcaaggtattt
gatttgcgtggaggaaatcagaagctcgtcgccgacctgcgaggccatgagggccccgtc
tggcagatttcctgggcccaccccatgttcggttcacttttggcgtcatgttcatacgac
aggcgcgtcattatttggcgtgagaacgctggtcagtggacacaatggcacgaatttaag
agtcacgatagctccgtgaacgcagtacagtttgccccttacgagtgcggtctcatgttc
gcggcagccagctccgatggaagtgtttctattctcagtagcggtaataatggtgcaact
tgggacctctctaaaatcactggagctcatctcatgggtgttaacagtgtcagctgggcg
ccttatgtggccccttgctcgttatttgataacgtggatcaccagattggtgacgcaaat
agcgaccatcaaaatggcggagcacctggaaggccttatatgaggctagttaccggtggt
agtgataacctcgtaaaaatctggaaatacagcgaggaccagtcttcctgggttgaggaa
cagagtctggaagcccatcaagactgggtacgcgatgttgcctggtgtccatcagcagct
ttctccaactgttctatgattgcctcctgttcgcaggaccgcacagttatcatttggact
tccaatgacgggaataaaacttggaagggacaggtactgaatacattcgacgacgtcatt
tggcacgtaagctggtcactgaatggcgatatgctggcagtgtctggtggagacaacaag
attaccctttggaagtgctcgcctgatcacaggtggatttgtatttcggaagatggtgga
agaaagattcgcggacaaacaccccatcctgccgatcgtactctttaa

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