Varroa jacobsoni: 111261297
Help
Entry
111261297 CDS
T07417
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111261297
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
111261297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
111261297
NCBI-ProteinID:
XP_022690406
LinkDB
All DBs
Position
Unknown
AA seq
2871 aa
AA seq
DB search
MAHYQGGPTGASNGASLEDCHTNFFALADLNGIKWRRLSFPKEHSSSSLASVGSPQSPLE
DPVLGSFARCLQAGLLCAWRRVPRTDHAGLMVDPLPPGPQDALAKELWLFWCGDEPDTSS
GGLLSHQLIDLEQGSWENGLAYETRNLLFKALHNLVQRCLLQRGFVRLGRWFLQPTEWPT
NHTSQTRQHGQSGGFSSSGGSQNTRCQSTNHVRTNPLQITFAFNFFVHGDSTVCVGVDVR
QHPAIQRLSRAHLAVTQQTAGSGATNAGAGSTGTGTAGTSAGAGNGDGAAAAGSGTMATG
SGGNSGIVNSGVGNTRVLLSPFGLQATLVGAAVGKDADQAATILNEWSHFYPLPPRDGGS
TNSGTTNTAGSNENCPPNMVDTQHGSTSGNGHDAPTICGSGGAGQLPSVVNVQVGSVRMK
YPSAYVFVSETDEVAHGQVNVAAGGTAFSLGNPGSVSTTSFHKGSSTKGSTSPPRSILSA
ALASKDGKDQARSVPGEANQQRVVLKNLAPEDNQQLGPLAGGLGRATSGSASRVSRIGRI
TSRHIRNKAWADATSTTGLLPTAQQSRQATSDQLERNGGDCETGAACWQLRELTCCGSQA
PTCACFRFAPGGPSGCRRDERDRSKKDLPPRLPQLKPGSAGFFHKRRGSHDIPPALDSIL
ATRFGLASLSSTNSGQITQQPNVIQTTEENGDKMAPPLPVVVGQLTPADSRSAASMPVSS
VETGNLTSLLSPLPQPKLEPGLQVALKLEPPGSAGGGLPPGHSPVSTPGDSSRPTLGGLS
PLNEDGNPSSVQVTIKQEIIMGSAPPSVANMDCCSTPVPTDSTTIKCGKDPAVDNQKDQP
VPYGGPPGASAATGLHFGHLGSHNKKQGVSGGNLLKRPTLPWVAHDDDDMLVPPSGDVSA
LYDYSAVSTALVWDAPPPSKRTFPLRLGDDRWNQNNNDNGSGPWFQQTPNDGHSVTLLHG
NHTSTAAAGPAALHHQQSVNGTDENLGSESGGEQTLADDGALLGALCVSPSEVTSAALTP
LSSGPHSNNPSTPRQHGAALTPGGGGHGHLQSASSVERTQAGAPGTGAGTPFDCGGGDPL
LDNMSSSSDGIGDAGSPDNGLLFPTPGSGGTKATGSLMSTPPQHLGACSDDLHRKTAGLL
ELTTMYPTPPSLEPNAAASPCNGPGTPLGPTHATLADEEPPAQGVEPEGDCSEWSMYVHR
PALLNKLVSSTLYAPVAPLPSSLQSPINLPSECVYRASWQTRLNTMAGSRGGANAAAQKI
PSGTQVNGVSPGATGANGPGHTQRRHLGQEGRQSSVGGPIGSRQWGPGDGGRPAPPYPLG
SPGYGAGATPGQAMMSPAGPMPGSVGPMSAGFGASRPSSVDPYQMSSGPPSVRETCGTGS
SLDKAANFPEVSSLLVTLFLSDSQLDIFRDHNFTSCTICVCNMNIKGADVPLYLPSQLLS
GPALSGFDDAQYKCTCGFSAVVNRHLSYQAGLFYEDEVEITGIPYESAPAKSKLALAAAS
QQVSVGNQQKAGQQQNNGQGRLSGKNELLIAEKQLVEYVQRQCLGMTETPCHLLAAFSGT
CASSLCSPECSQPQGLDPRELSPPLSALAMRLLHQTGSTGQQQPVSTTCNSDNSSSSSNS
FAVTSSGGDSSAAIYGVSALQSPQLMADGCQVAALALEAALVGNMGALIQPTSQWAGRHS
FDEATRAGLLHRWAFLQVATPPNHATVVKLLRSLQPILQDGVHNQRKSQKGPSQNMWEVT
YRVVGPLTWRQFHRLAGRGTEDQCEPQPIPSLLIGYDKDWLSISPFALKYWDKLLLEPYA
APRDVAYVVVCPDADALQAPIKTFFRELSAIYEANNLGRHCALAKTFRDGILKVGNRSAS
IDKTKTFSEDNGAVFTPGGGQPSPAAGTPQPSSQQSADQRSGSTNDRPQPPDEWLGDLFV
QLGLVDASEEEHSGNEQSNASAANTNGNNPPTVIPAMTTTTTKGGSKGRGNKEKQQQQKN
AAATAAAAAAVAAAAAAAAAQQTTAPKPPKSERLIQRNALLTASLTLYSQTCRLQLAPQL
AGLQRLDKSLLDGPLQANAPKTQQLPAASPRAPTTPDNPATPSVDKALLSGSAADGNKAD
VKEEGGSAVPSAAASNSTTSSNSVTSQQDQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQHNNAPGGSSGQDGTSSSQQSGTAGTAAGSDGTGTSTGYASPASSMASLQSGL
NADDSAEPNSTPAIVLYVVDPTPLHAAGDEEARRLALLALHACFERTLSQLPGHVRANVQ
LQIVPLEAVLAVEQCASPAKRHDLLVQTALSLFYQSGPTLPAVTPPGQVKSLTGMGPAAS
QDQFIKRKMQSQQAIAESSKTATTLNGPTSNHRPAGSPDTDTTLNASSSIVDDIRTFNPP
FILAPTKDKQAELGEMFGDHQERSSILFVSYCLSEDQRWLLASVSTERGELLRNASINVA
VPDRTRRKRASARFLGLNKLMEFVLDVVSVGAVRPWRLVIGRLGRIGHGELKEWATLLSR
KSLLRYSRHLRELCAQCGVLSSPLDVPCILSACLVSLEADSCLQVFADQCSPDERVSTNA
QRCELSTPSDATCTHILVFPTSATTQSSQATFNHLAEDHMDLGNDDELFNTITQDMDGPD
NFDDIVNWNLDASPENNMTGGIGDDSAQGSGIGGLGSMRNARSPNDDPMASIMMGSGGGS
GMGLHNGLPSSGLGSGGVSVGGPSSGGVNGNRLGAGGYGEFLLGGEEPMQLLQQPLALGY
LVSTAPAGPLPKWFWAACPHLEGVNPVFLKSALVLHSPTVHQNQDDILHGNQRNGHPLDS
NLTTDVLRYVLEGYNALSWLRLSPTTHDRASCLPLHVQNLLTLYHALHALL
NT seq
8616 nt
NT seq
+upstream
nt +downstream
nt
atggcccactatcagggaggaccaactggtgcctccaatggagccagccttgaggactgt
cacacgaacttcttcgccttggcggatctcaacggaataaaatggcgtcgattaagtttt
ccaaaagaacactccagttcttcgttggcatctgtcggcagtcctcaaagtcccctagaa
gaccccgttcttggctcattcgcgcgctgccttcaagctggcctactctgcgcttggcgg
agagtaccgcgtaccgatcatgcaggtttaatggtggatccgctacctccgggtccccag
gacgctttagcaaaggagctttggttgttctggtgtggagatgagccagacacgtcaagc
gggggtctgctgtcgcatcagctcatcgacctggaacagggttcgtgggagaacggcctt
gcatatgaaacacgcaacctgttatttaaggccttacacaatttggtccaacggtgcctg
ctacaaagggggttcgttcgtttgggtcggtggttcctccagccaactgaatggcctacc
aaccatactagccagacacgtcagcatggtcaaagcggaggattttcctcgagtggcggc
agccaaaacactcgctgccaatcaacaaatcacgtgcgcaccaacccgcttcaaataaca
tttgcgttcaactttttcgtgcacggcgactcgaccgtttgtgtcggcgtcgatgttcgc
cagcaccccgctattcagcggctttcgcgggcgcatctagccgtaacgcagcaaacggca
ggaagtggtgccaccaacgcgggcgcgggatctacgggaactggaacggcaggtacatcg
gccggagcaggaaatggtgatggtgcggctgctgcaggaagtggcaccatggctacaggt
tctggtggaaactctggcattgtaaacagcggagtcggcaatacgcgtgtcttgctgagt
cctttcgggttacaggccacattggtaggggctgccgtcggcaaagacgccgatcaagcc
gctactatcctaaatgagtggagccatttctatccattaccacctcgagatggtggttcg
acgaatagcgggacgacgaatacggctggtagtaacgagaactgtccaccaaatatggta
gacacgcagcatggtagcacctccggcaatgggcatgacgccccgacaatttgcggaagc
ggcggcgctggccagcttccttccgtagtcaatgtgcaagttggaagtgtacgcatgaaa
tacccgtcagcatacgtattcgtttcggaaacggacgaagtagcccatggacaggtaaat
gttgctgccggaggaacggctttttctctaggaaacccaggtagtgtgtcgacaacatcg
tttcataaagggtcctcaacaaaaggtagcacctctccgcctagaagtatactcagcgca
gctctggcatcgaaggatggtaaggatcaggcacgttcagttcccggtgaagctaaccag
caaagagtggtcttaaagaatctagcgcctgaagataatcaacagttggggccattggca
ggcggtctgggaagagcgacgtccggcagcgcttctcgagtatcacggataggtcgcatt
acgtcaagacatatccggaacaaggcatgggccgatgcgacctcaacgaccggactccta
ccaactgcacagcaatcccgacaggcgacgagtgaccaattggaaaggaatggtggagat
tgtgagacgggagccgcttgttggcagttgcgtgaactaacttgttgcggatcacaagct
ccaacatgcgcttgtttccggtttgcaccaggaggtcccagcggatgtcggcgggatgag
cgggatcgtagcaagaaggatttgccgccacgtcttcctcagctgaaaccgggctccgcc
ggcttctttcacaaacgtcgagggtcgcatgacattcctcctgctcttgattcgattctg
gccacccgctttggtcttgcatctctatcatcgactaattcaggacagatcacgcaacag
ccaaatgtaatacaaaccaccgaagaaaatggagataaaatggcaccgccgttgcctgtt
gtcgtaggtcagttaacgccagctgattcaaggtcagcagcctcaatgccagtgtcctca
gtggagacaggcaacctaacgagtttactctcgccgctccctcaaccaaagctcgagccg
ggattacaagtagcacttaagttagagccacctggtagtgcaggtggcggtttacctcct
ggtcattcgccagtatcaacaccgggagatagttcacgcccaacacttggtggtctctct
cctcttaacgaagacggcaatccatcgagtgttcaagtcacgattaaacaggagattatt
atggggtcggcgcctccaagtgtcgctaacatggattgctgttcgacacccgtacctact
gattctaccaccattaagtgtggcaaagacccagccgtagacaaccaaaaggaccagcca
gtaccttatggaggtccaccaggtgcctcagctgccactggtctacactttgggcacctc
ggatcgcacaacaagaaacagggcgttagtggaggtaaccttctgaagcggccgactctt
ccatgggtggcccacgacgatgatgatatgcttgtgccgccaagtggcgatgtaagcgct
ttgtacgattattcagcggtgagtacagcgctcgtgtgggacgctccgccaccatctaaa
cgaactttcccgctacggttaggggatgatcggtggaatcagaataacaatgacaacggt
tccggcccgtggttccagcagaccccaaacgatggtcattcagtgacattacttcacggc
aaccacacatcaacagcagcagctggaccagccgcactacatcatcaacaaagtgttaac
ggcaccgacgagaatttaggtagcgaaagtggtggtgagcaaactttagcagacgatggc
gctctactgggtgctctgtgtgtaagcccctcggaagtgacttcggctgctctcacgccg
ctcagcagtgggcctcattcaaacaacccgtccacgccccggcagcacggagccgctctg
acgcctggtggcggaggccatggtcacctacagtcggcgtcttcagtggagagaactcaa
gcaggagcgccaggaactggtgctggcacgcctttcgactgtggaggtggggacccactt
ttggacaacatgtcctcgtcgtccgatggcattggcgatgcgggatctcctgacaacggt
ctgcttttcccaacgccgggttcgggcgggaccaaagcgacaggaagcctcatgtcgaca
cccccgcaacatcttggcgcttgcagtgatgaccttcatcgtaagacagctggattactt
gaattgacaacaatgtaccccactccgccatccctcgaaccgaacgccgccgcgtcacct
tgcaatggaccagggactccattaggtccaacgcacgcaaccctggctgacgaagaacct
ccggcgcagggtgttgaaccagaaggcgactgcagcgaatggagcatgtacgtgcaccgg
cctgctttgttaaacaaattagtctcgtcgacgttatacgcgccagtagcaccgcttcca
tcgtcacttcaatcgccaattaatctgccatcagaatgcgtttatcgagcatcctggcaa
acacgtttgaatacaatggcaggtagtcgcggtggagctaacgccgccgctcagaagatt
ccatcgggtactcaggtcaatggggtcagtcctggcgctactggggctaatggaccggga
cacactcaaaggcgtcatttaggccaagaaggccgtcagagctcagtcggaggcccaatc
ggatctcgacaatggggtcccggcgatggaggtcgacctgcaccaccttatccattaggt
tcaccaggctacggcgctggagctacgcctggtcaagctatgatgtcaccagcgggcccg
atgccaggtagcgttgggccaatgtcggctggtttcggcgcctcgaggccatcatccgtt
gacccttatcagatgtcttctgggccgccgtctgtacgggagacgtgcgggactggttct
tctcttgataaggctgccaattttcctgaagtgtcgagtcttctagtaaccctgttcctg
tcagattcacaactagacattttccgcgatcacaacttcacatcatgtactatctgcgtt
tgcaacatgaacatcaaaggagcagacgtaccattatacctcccaagtcaactgctctct
ggtcctgctcttagcggctttgacgacgcacaatacaaatgcacctgcgggtttagcgcg
gtggtaaatcgtcacttgagctatcaagctggcttgttttacgaagatgaagtagagatc
acgggtattccgtatgaatcagcaccggccaagagtaaacttgccctagcagctgcatca
cagcaagtcagcgtgggaaatcagcaaaaagccggccaacaacaaaacaacggtcaggga
cggttgtcaggaaaaaacgaactgttaatagcggaaaagcagctcgtagagtatgtgcag
cggcagtgtcttggtatgacggaaacaccatgccatctcctggccgctttcagcggcaca
tgcgcctctagcctatgtagtccagagtgcagccagcctcagggtctcgatcctcgagag
ctgtcgcctccacttagcgcattggcaatgcgactgcttcatcagacaggctctacggga
caacaacagccagtttcaacgacatgtaacagtgataatagcagcagtagcagcaattcg
tttgctgttacgagtagcggtggtgacagtagcgcggccatttacggagtcagcgcgtta
caaagcccacaactaatggccgacggttgtcaggtagcagccttagcactggaagcggca
ctcgttggtaacatgggagccttgattcaacctactagccaatgggcgggtcgacattcg
ttcgatgaagcgacccgggcgggactcctgcaccgttgggctttcctacaagtcgctacc
ccgcccaatcatgcaacagtcgtcaaattgctccgaagcttgcaaccgatcttacaggac
ggcgttcataaccaacgaaaatcacaaaaaggtccgtcgcaaaatatgtgggaagttacg
tatcgagtggtgggtccgctgacttggcggcaatttcatcgtctagccggtcgtggtacg
gaagaccagtgcgaaccacagcctataccatcacttcttatcggctacgataaggactgg
ctatcgatctcgccgtttgccctcaaatattgggataagttattgctggagccatacgca
gcaccacgcgatgtagcatatgtggttgtgtgtcctgacgcagatgcacttcaggcacca
atcaagacgtttttcagagagctgagcgcaatatatgaagctaacaatctcggaaggcat
tgtgccttagccaaaacattcagggacggaatactgaaagtcggaaatcggtctgccagc
atcgacaaaaccaaaaccttttctgaagacaatggagcggtttttactccaggtggtggt
cagccgagcccagcagcaggcacaccacaaccttcatctcagcaaagtgcagatcagaga
tcgggaagcaccaatgaccgacctcagccccccgatgaatggctaggagacctgtttgtt
cagctgggtcttgtcgacgcatccgaagaggagcactctggtaacgagcaaagcaatgca
tctgctgcgaataccaatggcaataatcctcccacagtaatccccgctatgactactaca
accactaaaggtgggtctaaaggtcgcggcaacaaagaaaaacagcagcagcagaagaac
gcagctgcaactgcagcagcggcagcagcagtagccgccgccgccgccgctgcggctgct
cagcaaacaactgcgccaaaaccaccgaaaagcgagcggctcatccagcggaacgccctt
ttaaccgctagcttgacgttgtactcgcagacctgtcgccttcaactagccccgcaactt
gctggtttacagcgtcttgataagagccttctcgacgggcccctgcaggcaaacgcacca
aaaacgcagcaattgccagcagcttcaccgcgagcccccactacccctgacaatcctgcc
actccatcggtcgataaggctttgctctcaggttcagcagcagacgggaacaaagccgac
gtaaaggaagaaggtggtagcgccgtaccaagtgcggcggccagcaactcaacaacaagt
agcaattctgtcaccagccagcaggaccaactgcagcagcaacagcagcagcagcagcag
caacaacagcagcagcagcagcaacagcagcaacagcaacaacaacagcagcaacaacaa
cagcagcagcagcagcaacaacagcacaacaatgcccctggcggtagcagtggccaggat
ggcacgagcagttcgcaacaaagcggtacggcaggtaccgcggctggatccgatggcacg
ggaacaagcaccggctacgcaagtcctgcaagtagcatggcaagcctgcaaagcgggctg
aatgccgacgacagcgcggaaccgaacagcacgccggcgatcgtactctacgtggtcgac
ccaacaccgttgcacgccgctggcgacgaggaggctcgccgtcttgcgcttcttgcattg
catgcatgcttcgagcgtacgctgtcccagctaccaggacacgtacgtgccaatgtgcaa
ttgcaaattgtcccgcttgaagcggtgctggccgtggagcagtgcgctagccctgcaaaa
cgtcatgacctgcttgttcaaaccgcgctgtcgctcttctaccagagcggacctacgctg
ccagcggttaccccgcccggacaggtaaaaagcttaacaggtatgggccctgcagcctcg
caagaccagttcataaagcgaaaaatgcaaagtcaacaggctatagccgaatcgagtaaa
accgctactaccttgaatggaccaacatcaaatcaccggcctgcaggaagtccagacacg
gacacgactttaaacgcgagcagcagcatcgtagacgatattcgaacgttcaatccaccg
tttatactcgcgccgacaaaagataaacaggcggagttgggagaaatgttcggcgaccac
caggagcgatcgtctattctatttgtgtcgtattgcttgtcagaagatcaacgatggcta
ctggccagtgtgagcacagaacgcggcgaattactccgcaacgcgtctatcaatgtcgcg
gtacccgaccggacacgacgtaagcgggcatcggcccgttttcttggtctcaacaaactc
atggagttcgtgctggatgtggtatccgtaggagcggttcgaccatggcgtctcgtaatc
gggcgacttggccgcatcggtcatggcgaactcaaggagtgggcaacgttactatctcgg
aagagtctactacgatactcacggcatctgcgtgagctttgtgctcagtgtggggtatta
tcttcacctctcgatgtaccctgtatcctcagtgcctgcttggtgtcgttagaggcagac
agttgccttcaggtgtttgctgaccagtgttcacctgacgaacgcgtttcgaccaacgct
caacgatgtgagttgtccacgccaagtgatgcaacgtgtacacacatactcgtattcccg
acttcagcaaccacccagagttcccaagccaccttcaatcatctagcggaagaccacatg
gacttgggtaatgatgacgagctgttcaatacgatcacacaagacatggatggaccagac
aactttgacgacattgttaactggaatctcgatgcttcgccggaaaacaatatgaccggg
ggtattggtgatgacagcgcccaaggcagcggtatcggggggctaggtagtatgcgcaac
gcaagaagtcccaacgatgacccgatggcaagcatcatgatgggctccggaggtggatcg
gggatgggccttcacaacgggctgccgtcgagtggtctaggcagtggaggggtgtcggtt
ggaggtccttcatcaggtggtgttaatggaaatcgattgggagctggtggatatggagag
ttcttactgggcggtgaagaaccaatgcaattattgcagcagcctctcgctctaggttac
cttgtttcaaccgctccggctggacccttgccaaaatggttttgggcagcgtgtccacat
cttgaaggtgtcaaccccgtcttcctaaaaagtgctttagtcctgcattcacctacagtg
caccagaaccaggacgacatcttgcacggaaatcagcgtaatggccatccgcttgattct
aatctcactaccgatgtattgcggtatgtgctggagggctataatgccctctcatggctt
cgattgagtccgacaactcatgatcgagcctcctgtctgcctctacatgttcagaacctg
ttgacgttgtatcatgcccttcatgccctcttatga
DBGET
integrated database retrieval system
