Varroa jacobsoni: 111261354
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Entry
111261354 CDS
T07417
Name
(RefSeq) S1 RNA-binding domain-containing protein 1-like isoform X1
Organism
vja
Varroa jacobsoni
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
HHH_9
YqgF
S1
HHH_7
S1_2
HHH_6
Motif
Other DBs
NCBI-GeneID:
111261354
NCBI-ProteinID:
XP_022690526
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MEARCTRASRRQRLMGAAESSPRQKIMPKRKVPRPISYLISDDEEDMVQPRDSLVKREPA
EDVEGPIAVPSKRRHERELYSGSVNKIQRLKQSVPVSVQRMNDCFRRVHEDTLGNSVQKE
NLAETKYLSLDNGEGFGSVSVKEEICRTSEQEGPQGDSPNLLFSQKLDGVSFVGGQIKQE
RPSAGVDTNIHYSASQVKLEPEHASRSDDNCEALSPGKVMQATAYSEAEVMTQVLSEVDV
LPEQDILTQILPTTPQITLSKRMNSRSKVEKLSTVYHKRNSLKVRPVSHARVMPQPQRKN
GSTGATREPRLNSREATQIPSTSGSKLSQELNSESHPVEAVLKSVFSAFSVTSTRAQLSN
RFSPFKSSPSEEVSCVPFNLRVQVPSRANPISLKKTLSPKLKSRLSKTPPKNTIGKKKLV
LKRLQSATDRKAKASLVRIKEEPVTPGKKKVTSKPANASNLEQEQTTYSKFVDGEIINVD
EQPGTSKMSDGLWDIYEIVSNKVDVNYTSVKRVVQMLEQGATIPFICRYRREQSGGLSTD
SIQMIQDEHKRLLQVRKKAEALSTKLAAQGQLTSSVRNAIFLAKSCDELDLVAEPLKTSG
PRTYAGKARSIGLEPIALSFWRGEKKFDELEITSFVDPAVEGKRTQQEVLQSIQYILADE
LRKDRVILDTLNGMSRSSQLSLLVKKKKALSKVPVNPKESEVKFQDYFQFQRSISAIDSH
QVLAINRGENLGFLSVAVQVPDFVLHSLKDVLRQRFGPNTLDKACQNLIESTVSDCSERL
CKPYLTRMVRAHLKERAENEAIKVFASNLRSLLMASPVRGEAVLGVDPGFANGCKMAMIS
KTGEVLSYGVMYPDRERHAAKRQLARLITTYECNLVAVGDGKGSQQVKAMISECSREGLF
AGQKVRFSTVREAGVSVYSVSAEAEKELPGLDSFVKSAVAIARRLQDPLVEYVKVEPRHL
GVGMYQHDINESRLKESLQGTVVECVSFVGVDVNVCPEFLLRQVAGLNAMAARNIIEYRQ
KHGPFMNREQLQLVPHIGPTRYEQCAGFVKILPETVQKCLDESVIVTRVKKPNMKQTISE
EFEPLDTTIVHPESYSTARAIIKELNLDVNEVGTPHFIAVIVNETKPATFSRLISKLSVS
QHTVEFILKALAAPRGSDLRDEGSAPIFSESLRTISDVRPGDTMRGKVMNVVPFGAFVDV
ALGNDVLLPTRFMGVANGKLHVGDAIEGRVMSVEPARNRVAISFIRFL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaggtgtacgcgagcatcgagaagacagcggttgatgggtgcagctgaatca
tcaccgaggcaaaaaattatgccgaagcgcaaggtccctaggccgattagttatctaata
agcgacgatgaggaagatatggtgcagcctcgagacagcctcgttaagcgggagccagca
gaagatgtcgaaggacccatcgcggttccgtcgaagcgacgacacgaaagagaactttac
agtggatcagtgaataaaattcaacggttgaaacaatcagtaccagttagcgtgcaaagg
atgaatgattgttttaggcgagttcatgaggataccttgggtaactcggtgcaaaaagaa
aacttggcggaaactaaatatttatcgcttgataatggtgagggatttggcagtgtatcg
gttaaagaggagatttgcagaacatctgaacaagaaggacctcaaggggattcgcctaat
ctgttattttctcagaaattggatggggtttcttttgttggaggacaaatcaaacaggag
cggccgtccgccggtgtggatacgaacatccattacagtgcatcacaagttaagctagaa
ccagaacacgcatccagaagtgacgataactgcgaggcgttgtcccctggaaaagttatg
caggcaacagcatattcggaagccgaagtcatgactcaggtactctcggaggtagatgtt
cttccggagcaagatattctgactcagattctaccaacaacccctcagatcaccttgtca
aaaagaatgaactcaaggagcaaggttgaaaagctctcaactgtatatcacaaacgtaat
tccctaaaggttcggcctgttagccacgcaagggttatgccgcagcctcagcgaaaaaat
ggctccaccggggctacacgtgaacctcgtttaaattctcgcgaggcaactcaaattcct
tcaacttcagggtcaaaactttcacaggaattgaactctgaaagtcaccccgtagaagcc
gtgctaaaatctgtgttttctgcattttccgtgacttccaccagggctcaattatctaat
aggttttctccatttaaatcttcgccaagcgaagaggtatcttgtgttcctttcaattta
cgtgtacaagttccgtcacgagcgaatccgattagtctaaaaaaaactctaagtcccaaa
ttgaaatctaggctatcaaaaacaccgccaaaaaacacgatcggcaaaaaaaaacttgtt
ctaaagcgacttcagtcagcgacagatcgtaaggcaaaggcaagtcttgtgcgaattaaa
gaagaaccagtgacgccaggcaaaaagaaggttacatcaaaacctgcaaatgcatctaac
cttgagcaggagcaaactacatacagtaaatttgtcgatggtgagatcatcaacgttgac
gaacaaccgggaacttcgaaaatgtcggatggtttatgggacatttatgaaattgtttca
aacaaagtcgatgtgaactatacgtcagtgaaacgggtagttcaaatgctagaacaaggc
gccactataccgtttatttgccgctatcggcgcgaacaatcgggcggactatccaccgat
tcaatacaaatgatacaagatgagcataagcgacttttacaagtacgtaagaaagcggag
gccctttctacgaagctggctgcgcaaggccagctgaccagttcggttcgtaacgctatt
tttctggcaaaatcatgcgatgagctggaccttgtcgccgaacctcttaaaacaagtggg
ccgagaacttacgccggcaaagcgcgtagtattggattagagccgatagccctaagtttc
tggcggggcgaaaaaaagtttgacgaacttgagatcacgtcttttgttgatccagcagtt
gaaggtaagcgaacccagcaagaagtgctgcagtcaatccaatacattttagccgatgag
cttagaaaagaccgtgttattttggatactttgaacggcatgagtcgatcatctcagcta
agtctcctggtaaaaaagaagaaggccttgtcgaaggtacccgtaaaccctaaggaaagt
gaagtaaaatttcaggactatttccagtttcaacggagcatctctgctattgacagccat
caggtgctggctataaatcgtggagaaaatctgggctttcttagtgtcgcagtacaggta
cctgatttcgttctgcattctttaaaagacgtacttcgtcagaggtttggcccaaacacc
ttggataaagcgtgccagaatctgatagagagcactgtatcggactgcagtgaacggtta
tgtaagccctatttaacgcgtatggtgcgagctcaccttaaggagcgagctgagaatgaa
gcgattaaagtattcgcatctaatctccgttcgttattgatggcttcacctgttcgaggc
gaagcggtgttaggcgtagatccaggctttgcaaatggatgcaagatggcaatgatttcg
aagacaggtgaggttctatcttatggagtcatgtaccccgatcgagagcggcatgcggcc
aaacgccaacttgccagactcatcacaacttacgagtgcaatctcgtggccgtcggcgat
gggaaaggaagccaacaggttaaagctatgatatcggagtgcagccgcgaagggctgttt
gctggacaaaaggtacgcttctcaacggtccgtgaggctggcgtgtcggtatacagcgtt
tcggcagaagctgaaaaggaattaccagggctggatagctttgtgaaaagtgccgtagct
attgcccgacgattgcaggacccacttgttgagtacgtcaaggtcgaaccgcgacatctt
ggagtcggcatgtaccaacatgatattaatgagtctagacttaaagagtcacttcaggga
acagtagttgaatgtgtcagttttgttggtgtcgacgtcaatgtttgtccagaatttctt
ctccgacaggtggcagggctaaatgcaatggcagcgcgcaacatcatcgagtatcgtcaa
aaacatgggcctttcatgaatcgcgaacagctgcaacttgtaccgcacatagggccaacg
aggtacgagcaatgtgcgggattcgttaagatcttacccgaaacggttcaaaaatgctta
gatgaaagtgttattgtaactcgagtaaagaagccgaatatgaaacagacgatttctgag
gagttcgaacccttggatacaaccattgttcatcccgaatcgtattcaacagcccgcgct
attattaaagagttgaatctcgatgtcaatgaagtagggacaccgcattttatcgcggtc
attgttaatgaaacgaaacccgctacattcagcagactcatatcgaaactctccgtatct
cagcacacagtcgagtttatcttgaaggcactggcggctccacgaggttccgaccttcgt
gatgaaggcagcgcaccgatctttagtgaatcacttcgtaccatcagtgatgtacgaccg
ggtgacacaatgcgtggaaaagttatgaacgttgttcctttcggtgctttcgtcgatgtc
gctcttggcaacgatgtcttgttaccgactcgcttcatgggtgttgccaacggtaaactt
catgttggggacgcgatcgagggtcgggtgatgtctgtcgaaccggctcgaaatcgggtg
gccataagtttcataaggttcctttga
DBGET
integrated database retrieval system
