Varroa jacobsoni: 111261599
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Entry
111261599 CDS
T07417
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
vja
Varroa jacobsoni
Pathway
vja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111261599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vja03009
]
111261599
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
90S particles
GTPase
111261599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
Rad17
AAA_14
AAA
PelX_Ig
ABC_tran
AAA_16
nSTAND3
FeoB_N
Motif
Other DBs
NCBI-GeneID:
111261599
NCBI-ProteinID:
XP_022690939
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MADSATDGGDRPQKKHVASHSGRKAEKKKAKANKQGAITKTNNAKAFAFNSAVKAEKMFR
RRKDLQEKRHHIPLVDRTPIEPPPYVVAIVGPPKVGKSTLLKCLIKNYTRQIINNINGPV
TVVSGKKRRLTLMECNNDINSMIDTAKVADLVLLVVDASYGFEMETFEFLNICQVHGFPR
IMGVLTHLDQIKSHKTLRNTKKQMKHRFWTEIYQGAKLFYLSGMVHGGYLKHEIHNLGRF
MSTIKFRPLDWRTSHPYILADRFEDITGQELIRQNPKIDRTICLYGYSRGAHLKQNALFH
IPGCGDYTAADISYLPDPCPLPDKLKKRKLDDRERLIYAPMSGVGGVVFDKDAVYIDLQG
SHSHHTGTAADEELDEEQGLLDGLLQTKVPLDQKITNTGFTLLSGTKPLDKDETNELTKR
VRRSMGPLDEIQKSDAGSNGSDSDEDEDEDEQDDSDDEHDDSESKDDGKSYDMKNNWGHK
FLEEEDVEMAATENESDGDEDMLPIARDQMMKKLAEGYAARSKKLGNLQFLVYGGAKKAS
RQTDFEGGSDKEGEDDEVFGGLFTKTKRSEGKIQTKKDLNAPENTRHRLIVDEIDYDQVC
LSIRDCFVTGRWAADEDAEQLLAQAKQDDEELFGDFEDLEKQLKDEEQAEQEEKKQHPQK
KATTHEERLKQIEAKRLEKKKRLKEMFDQEYDDKGDDKTLYDEIKEEMNQQAQLNKAEFA
DLDDSRRVLFEGFRAGLYVRVELRGLPCELVQNFDPSYPIVLGGLNTAENRVGYLQVRVK
KHRWFKKILKSADPLVMSLGWRRFQTTPVFFTQDHNMRQRFLKYTPMHLHCYAAFWGPIT
PQNSGFIAIQNSVQDKSDFRVCATGVVLEIDKTTQIVKKLKLTGTPIKVKNKTAFIEGMF
NSIIEVTKFEGAALRTVAGIRGQIKKPIKAPPGAFRAAFEDRLLKADIVFLRTWYTVPVP
KFFITVNTLLLPSSEKDKWKGMKTVGELRAEKGLRAPVNQDSLYTGVERREFFEKPLRLP
KSLQAALPYKDKPKQETIIEGGNALHRVAIVPDEQQQRVSKMMTMMRTVHSEKQLKMRRE
MEERVRQHKRAMEAQELKRLVKQRQVKRHICKVLQQNELKRQKMQAGKIGRKKLE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcggactctgccactgatggaggcgaccgtccccaaaagaaacatgtggcaagtcat
tcaggtcgaaaagccgaaaagaaaaaagccaaagccaacaaacagggcgccattactaaa
acaaacaatgcaaaggcatttgcgttcaactcagctgttaaagcggagaagatgttccga
cgccgtaaagatctccaagagaagcgacaccacatcccgcttgtagacaggacccctatc
gaaccgcccccgtacgttgtggccatcgtaggtccacctaaagtcggcaagagcacgctg
ctaaaatgtctcatcaagaactatacgcggcagattatcaacaacatcaacggaccggtc
accgtcgtttctggtaagaagcgacgtcttacgttgatggaatgcaacaatgacatcaat
tcgatgatcgacacggccaaggtcgctgatctcgttctgcttgtcgtggatgcttcgtac
ggatttgaaatggagacatttgagttcttaaacatctgccaggtccatggctttcctagg
ataatgggcgtgctcacgcatcttgaccagatcaagagccataaaaccttgcgtaatact
aaaaaacaaatgaaacatcgtttctggacagaaatttatcaaggcgcaaaattattctat
ctgtctggtatggtgcacggcggttacctaaagcacgagattcataatcttggtcgcttt
atgtcgacgataaagtttcgtcctctggactggcgaacttctcatccgtatatcttggcg
gatcggtttgaagatatcactggccaagagctaattcgacaaaatccgaaaatcgaccga
acaatatgcctttatggttatagccgcggagctcaccttaaacagaacgctctgtttcat
attcctggatgcggcgactacaccgcggctgatatctcatacttacctgatccatgtccg
cttcctgacaaattgaaaaagcgaaaattggatgatcgggaacgtctcatttatgctccg
atgtcgggcgttggtggcgtagtatttgacaaggatgccgtttacattgatcttcaaggc
agtcattcgcatcacacaggtacggcggctgatgaagaactcgatgaagagcagggtcta
ctggatggccttttgcaaactaaggtccctctggatcagaagatcacgaacactggattt
actcttttatctgggacaaagccgcttgacaaggatgagacgaatgagttgaccaagcgg
gtgcgccgttcaatgggtccattggatgaaattcagaaatctgatgcgggttctaacgga
tctgactcggacgaagatgaggatgaggatgagcaagatgactctgatgacgaacatgat
gacagtgaatctaaagatgatggaaagtcctatgacatgaaaaataattggggacacaaa
tttctcgaagaagaagatgtggagatggccgcgactgaaaatgagtcagatggcgatgaa
gatatgcttccgattgcacgggatcagatgatgaagaaactcgcagagggatacgctgct
cgtagtaaaaagctcgggaatcttcaattccttgtttacggtggtgctaagaaggcgagc
cgccaaacggatttcgaaggggggagcgataaggagggtgaagatgacgaagttttcgga
ggcctgtttactaagaccaaaagaagcgaaggaaagatccaaaccaaaaaagatcttaac
gctccagaaaacacccgccatcgccttattgttgacgaaattgattatgatcaggtgtgt
ttatcgattcgggactgttttgttacgggtcgttgggctgcagacgaagacgcggaacag
ctgttggctcaggccaaacaagatgacgaagagctctttggagactttgaagatctcgag
aagcagctcaaggacgaagagcaggcggagcaagaggaaaagaaacaacatccccaaaaa
aaggctactacacacgaggagcgattgaaacagattgaggcaaagaggcttgaaaaaaag
aagcgtctaaaagagatgtttgatcaagaatacgacgataaaggagatgacaagacattg
tatgacgaaatcaaagaagaaatgaatcagcaggcgcagctcaacaaggcagagtttgcg
gacctggatgactctcgtcgggttttgttcgagggttttcgagcaggcttatatgtacgg
gtggagcttagaggattaccgtgcgaactcgtgcagaatttcgacccatcttatccaatc
gttcttggaggactcaatactgccgagaacagagtcgggtatctgcaggtgcgtgtcaaa
aagcaccgttggttcaagaagatcctgaagagtgccgatccgcttgtgatgtctttggga
tggcggcggttccaaacgacgccagtgttctttactcaggatcacaatatgcggcaaagg
tttctgaagtacactccgatgcatctgcactgttacgctgccttctggggcccgattact
cctcagaactccggtttcattgctattcagaattcagtgcaggacaaatctgattttcgg
gtctgtgcaactggtgtggttctcgaaattgataaaacgacgcagattgtaaagaagctg
aaattaaccggtactccaatcaaggtgaaaaacaaaaccgcttttattgaagggatgttt
aacagtattattgaagtgaccaaattcgaaggcgctgctttacgcacggtcgccggcata
cgtggtcagattaagaagcctattaaggcaccaccaggcgcctttcgcgcagcgttcgag
gacaggctgcttaaggccgacatcgtctttctgcggacttggtacacagtgcccgtacct
aagttcttcataactgtcaatacacttctgctgccgtccagtgaaaaagataaatggaaa
ggtatgaaaacggtgggagaacttcgtgccgagaaaggacttagagcacctgttaatcag
gattcgctgtatacgggtgtggaacgacgcgagttcttcgagaaaccgcttcgattacca
aagagtctacaggccgcactgccatacaaggataagcctaaacaagaaacgattattgaa
ggcggaaacgccctccatcgcgtggccatcgtacctgatgagcaacagcagcgcgtctcg
aagatgatgacaatgatgaggactgttcactcggagaagcaactgaaaatgcgacgcgaa
atggaggaacgggtccgtcagcacaagcgagccatggaagcgcaagaactgaagagactt
gttaagcaacgccaagtaaagaggcacatctgcaaagtgctacaacaaaacgagttaaaa
agacagaagatgcaggcagggaaaattggcagaaaaaaattagaataa
DBGET
integrated database retrieval system
