Varroa jacobsoni: 111261671
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Entry
111261671 CDS
T07417
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
vja
Varroa jacobsoni
Pathway
vja04382
Cornified envelope formation
vja04512
ECM-receptor interaction
vja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111261671
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111261671
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111261671
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vja04147
]
111261671
00536 Glycosaminoglycan binding proteins [BR:
vja00536
]
111261671
Exosome [BR:
vja04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111261671
Glycosaminoglycan binding proteins [BR:
vja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111261671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111261671
NCBI-ProteinID:
XP_022691031
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MRERPRARWKALAQSNAASLRGQRQSATLSARISDNLFESNLLITGFILAATFTLTNQQH
QYSDFYKKDHEPNSIIAQSQVRDALCSDCSPESRRCIGERGLTGIRGQKGLPGPMGPPGP
PGDEGLQGEKGEQGLPGLAGMKGGRGDPGRRGVSGLHGEPGQPGMPGEPGRPGLRGKDGY
NGTRGDVGMIGFPGPKGADGRPGIMGPPGQKGEPAYGGVGAKGEKGSPGIPGPQGPPGIT
GQDGFPGRKGDPGPSGNDGRPGQPGLPGPPGMSLPGQKGERGFKGEPGLPGESAHCFNRS
IMVDNEGSEQIIFTPGPKGDKGDRGEPGEGSSPGAPGAPGIPGQPGLPGEKGDRGLPGDL
GPAGVPGYPGSPGLQGLKGDPGIPGRPGRPGEPGHKGEVGPPGLPGEMGLTGPPGAPATA
EGNTIGPPGFKGEKGMPGPMGPPGEEGRPGDLGLDGSPGPPGAPGEPGQRGNDGHPGPRG
EKGDSGLQGYPGQPGSPGLPGPEGLPGEKGLPGRDGYSIPGDRGLPGSPGKDGEPGVPGR
PGSKGLPGIPGDSLYGQPGFPGEPGPEGPKGVAGRPGQPGVPGIPGLKGDKGGVCNACEP
GIPGLKGAPGYPGEPGPKGDAGLPGSPGRAGDRGFDGYPGERGAPGEMGMPGLMGMPGQK
GERGLDYIYDGPNEKGPPGPPGPPGYPGTPGDPGPEGPPGPQGASGPPGYDGLQGQPGLP
GDPGPTGPRGDKGDPGLPGYPGYGERGPPGLLGEPGPPGIEGPKGDKGEKGDPAPEAIKF
KERGLPGPPGDRGPVGMEGPPGPRGLPGLNGIDGQPGQDGPPGEPGFPGAPGPRGPPGLP
GSPGPMGVEGLPGMQGPIGIKGERGRPGLPGELGPPGDRGTGLPGLKGLPGPPGPPGEAG
LPGPVGREGYPGPSGLPGEPGPKGEQGLPGRDGLPGLKGDQAQEGQPGPKGDRGLPGIPG
PPGNPGNDGLPGHPGASGLKGDQGPQGPPGNPGTTGKPGSDGADGLRGEPGLPGPRGPKG
DPGNPGNPGLPGVQGPPGVEGQPGKPGLPGMPGKDGPPGFAGFVGHPGQKGDRGLPGRDG
LKGESGRAAQKGERGRPGIPGTPGAEGPSGSPGPQGPPGEKGEKGLPGEGRPGEPGPEGL
PGMPGLPGIDGPPGPPGPDGPPGLPGMPGNKGDAGAAGDPGPPGAPGAPGATGLPGPPGY
RGIKGNPGLDGPPGMPGQEGIVGAPGEPGYPGYIGEPGNPGEPGRPGPPGNPGFPGPPGP
QGPKGNIGPVGTPGLAGLKGDPGLDGLPGNPGPPGHEGPPGLPGDPGLDGPPGPIGSPGE
PGQPGWAIQGVKGDRGEPGPVGERGLPGYPGAKGEPGRDGRDGPVGEPGLPGQGNIPGPP
GRDGTPGPVGEPGSPGHPGPPGIDGLMGEPGQPGYPGEPGPVGPIGEPGPPGWQGDPGIP
GLPGFKGDQGPPGQPGFPGRSGEKGDKGERGYPGLPGPAGFQGPMGPKGQSAIAIPGEAV
PGPMGEPGERGHPGIPGDPGIPGEPGLKGEKGEPALIGMPGPAGPPGRDGLQGPPGPRGL
TGRDGPMGREGPAGPPGAATWDLVEEQVGSLVVIHSQSMEIPVCPLRLKEIWNGYSLLYL
DGNGRAANQDLGNPGSCMQRFSTMPFVFCENTDTCNYAARNDRSYWLSTMRPFSTRPVFG
REISEHISRCAVCEVPNYTLAVHSQSREIPQCPAGYTNLWHGYSWAMHTGAGAQGGGQPL
ASPGSCLQHFSPVPFVECNGARGSCSHFSNKLGFWMAQIDPQRMFNMPTTSVNEEKHTPL
QNLVSRCSVCMKNI
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagcggccgcgcgcccgctggaaggccctggcgcaatcaaacgccgcttctctg
cgaggccagcgacaatcggctacattaagtgctcgaatcagtgataacttgtttgaatcg
aacctcctaattacaggattcattttggcggcaacatttacgctgaccaaccaacaacac
caatattcagatttttacaagaaggatcacgaaccgaattctataatagcccaaagccaa
gtgagagacgcattatgttcggactgctcaccagaatcgagacgatgtatcggcgaacga
ggtctgactggaatccgcggccagaagggccttcccggccctatgggaccaccggggcct
cccggtgatgaaggtctgcagggcgaaaagggagaacaaggtttaccaggactagctgga
atgaaggggggacgtggtgatcctggacgtagaggcgtttccggcctgcacggagagcca
ggacagcctggaatgcctggtgagcccggaagacctggcttacgcgggaaggacggctac
aatggaactcgtggtgacgtcggtatgataggatttccggggccaaaaggcgcggatgga
agaccgggaataatgggtccacccggccaaaaaggagaacctgcgtatggaggtgtaggt
gctaagggagaaaaaggctcaccaggtattcccggacctcaaggaccgccaggtatcact
ggtcaagacggttttccaggtagaaagggtgatcctggaccttctggaaacgatggtcgt
cccggtcagcctgggttacctgggccaccaggtatgtccttaccaggccaaaaaggcgaa
agggggtttaaaggcgaaccaggcctaccgggcgaatcagcccattgtttcaaccggtca
attatggttgacaacgaaggttctgaacaaattatcttcactcctggcccaaaaggagat
aaaggagatcgaggcgagcctggtgaaggtagttcacctggagcacccggagcacctggt
ataccgggacaacccggtctgccgggtgaaaaaggtgaccgaggtctgccaggcgatcta
gggccagcaggagtaccaggttacccgggtagtccaggtttacaaggcctcaagggcgac
cctggtatcccaggccggccaggacgaccaggtgaacctggacataaaggagaagtggga
cctccaggacttcccggagagatgggactaacaggacctcctggagcgcccgcgacggcg
gaaggaaacacgatcggtcccccaggcttcaaaggggaaaaaggcatgccaggcccaatg
ggtcctccaggtgaagagggtagacccggggatttaggattggatgggtctcccgggcca
cccggtgcaccaggggaacctggccagcgtggcaacgatggtcatcctggtccccgcggt
gaaaaaggcgattctggacttcaaggttatcccggccaacctggaagccctgggctgcct
ggtccagaagggctacctggggaaaaaggattacccggacgagacggttattccatcccc
ggagatcggggattgcctggctcgcctggtaaagacggagaacctggagtgccaggacga
cctggctccaaggggctacctggcatccccggtgattccctctatggccaaccaggtttt
ccgggagaaccgggaccagaaggtcccaagggagtagcaggcaggcccggccaaccaggt
gtgccaggtattcctggacttaaaggagataaaggaggtgtctgtaatgcttgcgagccc
ggtatacccggtctgaagggcgcgcctggatacccaggtgagcctggaccaaaaggcgac
gcgggacttccaggaagccctggtcgagcaggtgaccgtggctttgatggataccctggc
gaacgaggagcgccaggagagatggggatgccaggtttgatggggatgcctggccaaaaa
ggcgagcgaggtttagactacatctatgacggacctaatgagaaaggaccgccaggtcca
cctggccctccaggataccctggtaccccaggtgaccctggaccggaaggtcctccggga
cctcaaggtgcttccggacctccagggtacgatggtctacaaggccaacctggtttacca
ggcgacccaggtccaactggacctcgtggcgataaaggtgatccaggtctgccaggctat
cccggttatggcgaacgcggtccgccaggcctgctcggagaaccaggtcctccaggaatc
gaaggtccaaaaggagacaaaggagagaagggtgatccagcacccgaggccataaaattt
aaggaaaggggtctacctggaccccctggtgataggggtcctgtaggtatggaaggtcct
ccaggaccacgtggtctaccaggactaaatggaatagacggacaaccaggtcaagatggc
ccgccaggtgagcctggcttccctggagcaccgggtcctcgtggtcctcctggcctaccg
ggctcacccggaccgatgggggttgaaggactgcctgggatgcaaggcccaatcgggatc
aaaggtgaacgtggtcgccctggtttacccggcgagttgggaccccctggagaccgtgga
acaggcctacctggactaaaaggcctacctggacctcctggtcctcccggtgaagcagga
ttgcctggcccagtcgggcgtgaggggtatccagggccgtctggactacccggcgagccc
ggccccaaaggagaacaaggactgcctggtcgagatggacttcctgggctaaaaggagat
caagcacaggaaggccaacctggccctaaaggagatcgcggtttgccaggtattcctggt
ccacccggcaatccgggcaacgatggactaccgggtcacccaggagcttcaggtctgaag
ggtgatcaaggcccacagggtcccccaggtaacccaggaacaacaggcaagcccggttca
gatggagctgatggactccgcggtgagccagggctacctggaccacgcgggccgaaagga
gaccctggcaacccaggaaaccctgggttgcctggagtacagggcccacccggtgttgag
ggacaacctggtaaacccggcctacctggtatgcctggcaaagacggcccaccaggtttt
gctggctttgtaggtcatccaggccagaaaggagacagaggtcttcctggacgtgatgga
ctgaaaggtgaatctggaagagcagcccaaaaaggggaacgcggtagacccggaattccc
ggaacacctggagcagaaggtccatccggctctccaggtccccaagggccgcctggcgag
aaaggcgaaaaaggtcttccgggagaaggtcgtcctggcgaaccaggaccagaaggactc
ccaggaatgcctggtcttccaggtattgatggtccaccaggacccccagggcctgacgga
ccccccggattacctggaatgcctgggaataaaggagatgctggagccgcaggtgatcct
ggaccgcctggtgctcctggagcgcctggagctaccggattgcccggtccgcctggatat
cgaggaataaagggtaacccaggactcgacggtccaccgggaatgcctgggcaagaagga
attgtaggagctcctggggaaccaggatacccaggttacattggagagccgggcaaccca
ggagaaccgggccggcctggaccacctggtaatccaggtttcccaggtcctcccggacct
caaggtcctaaaggcaacatcggtcctgtgggaactccaggtttagctggactaaaagga
gaccctggtttagatggccttcctggcaatcccggtccccccggccatgaggggccacct
ggactacctggtgacccaggcctagacggcccaccgggtccaattggctctcctggagag
cccggacagcctggctgggcaatacagggcgtaaaaggagacagaggagaaccaggccct
gtaggggaacgaggattaccagggtaccctggtgctaagggcgaacctggtcgggacgga
cgagatggtcctgtaggagagcccggactacctggtcaaggtaacattccgggacctcct
ggaagagatggtacgcctggacctgtaggagaacctggttctcctggccatccgggtcct
cccggtattgacggcttaatgggcgagcctggccagcctggctaccccggcgagccagga
ccggttggacccatcggtgaacctggtcccccaggatggcaaggagacccaggcattcct
ggtcttcctggctttaagggcgatcaaggaccgcctggacagcccggttttccaggtaga
agcggtgaaaaaggagacaagggtgaacgaggttatccagggcttccaggaccggctgga
ttccaaggaccaatggggccaaagggtcagtcagcaatcgcaatccctggtgaggctgtt
cctggtccaatgggagaacccggagaacgcggccaccctggaattccaggggatcccgga
atcccaggagaacccggcttgaaaggggaaaagggtgaaccagctcttattggaatgcct
ggtcctgcaggcccaccaggaagggatggcctacaaggaccacctggacctcgtggtctt
accggacgcgacggccctatgggtagggagggccctgcaggcccaccaggggcggctacg
tgggatttggttgaggagcaagttggatcgttggttgttatccactcccagagcatggag
ataccagtgtgcccactccgccttaaagaaatttggaacggatattcattgctttatttg
gacggaaatgggcgggcagctaatcaagaccttggcaatccaggatcatgtatgcagcgt
tttagtacaatgcctttcgtgttctgtgaaaacacagatacttgtaactatgctgcacgt
aacgatcgctcgtattggttgagcacaatgcgtccattctctacgcgacccgtttttggc
cgagaaatttccgagcacatctcgcgatgcgctgtttgtgaagtacccaattatacgctc
gcggtgcacagccaatcacgtgagatccctcaatgcccggcaggctacactaatctatgg
catggttattcgtgggcaatgcacacaggtgctggagcgcagggcggtggacaaccactt
gcctcgcctggttcctgcctacagcatttcagtcccgtgccgttcgtcgagtgcaatggt
gcccggggatcatgctcgcatttcagcaataagctaggcttctggatggcacaaatcgat
cctcaacgaatgtttaacatgcccaccacaagcgtaaacgaagagaagcacacacctctt
cagaatctcgtatctaggtgttctgtgtgcatgaagaatatttaa
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integrated database retrieval system