Varroa jacobsoni: 111261671 Help Entry 111261671         CDS       T07417                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism vja  Varroa jacobsoni Pathway vja04382   Cornified envelope formation vja04512   ECM-receptor interaction vja04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:vja00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111261671  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     111261671  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     111261671  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vja04147]     111261671    00536 Glycosaminoglycan binding proteins [BR:vja00536]     111261671 Exosome [BR:vja04147]  Exosomal proteins   Exosomal proteins of other cancer cells    111261671 Glycosaminoglycan binding proteins [BR:vja00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111261671 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  111261671 NCBI-ProteinID:  XP_022691031 LinkDB All DBs Position Unknown AA seq 1814 aa AA seqDB search MRERPRARWKALAQSNAASLRGQRQSATLSARISDNLFESNLLITGFILAATFTLTNQQH QYSDFYKKDHEPNSIIAQSQVRDALCSDCSPESRRCIGERGLTGIRGQKGLPGPMGPPGP PGDEGLQGEKGEQGLPGLAGMKGGRGDPGRRGVSGLHGEPGQPGMPGEPGRPGLRGKDGY NGTRGDVGMIGFPGPKGADGRPGIMGPPGQKGEPAYGGVGAKGEKGSPGIPGPQGPPGIT GQDGFPGRKGDPGPSGNDGRPGQPGLPGPPGMSLPGQKGERGFKGEPGLPGESAHCFNRS IMVDNEGSEQIIFTPGPKGDKGDRGEPGEGSSPGAPGAPGIPGQPGLPGEKGDRGLPGDL GPAGVPGYPGSPGLQGLKGDPGIPGRPGRPGEPGHKGEVGPPGLPGEMGLTGPPGAPATA EGNTIGPPGFKGEKGMPGPMGPPGEEGRPGDLGLDGSPGPPGAPGEPGQRGNDGHPGPRG EKGDSGLQGYPGQPGSPGLPGPEGLPGEKGLPGRDGYSIPGDRGLPGSPGKDGEPGVPGR PGSKGLPGIPGDSLYGQPGFPGEPGPEGPKGVAGRPGQPGVPGIPGLKGDKGGVCNACEP GIPGLKGAPGYPGEPGPKGDAGLPGSPGRAGDRGFDGYPGERGAPGEMGMPGLMGMPGQK GERGLDYIYDGPNEKGPPGPPGPPGYPGTPGDPGPEGPPGPQGASGPPGYDGLQGQPGLP GDPGPTGPRGDKGDPGLPGYPGYGERGPPGLLGEPGPPGIEGPKGDKGEKGDPAPEAIKF KERGLPGPPGDRGPVGMEGPPGPRGLPGLNGIDGQPGQDGPPGEPGFPGAPGPRGPPGLP GSPGPMGVEGLPGMQGPIGIKGERGRPGLPGELGPPGDRGTGLPGLKGLPGPPGPPGEAG LPGPVGREGYPGPSGLPGEPGPKGEQGLPGRDGLPGLKGDQAQEGQPGPKGDRGLPGIPG PPGNPGNDGLPGHPGASGLKGDQGPQGPPGNPGTTGKPGSDGADGLRGEPGLPGPRGPKG DPGNPGNPGLPGVQGPPGVEGQPGKPGLPGMPGKDGPPGFAGFVGHPGQKGDRGLPGRDG LKGESGRAAQKGERGRPGIPGTPGAEGPSGSPGPQGPPGEKGEKGLPGEGRPGEPGPEGL PGMPGLPGIDGPPGPPGPDGPPGLPGMPGNKGDAGAAGDPGPPGAPGAPGATGLPGPPGY RGIKGNPGLDGPPGMPGQEGIVGAPGEPGYPGYIGEPGNPGEPGRPGPPGNPGFPGPPGP QGPKGNIGPVGTPGLAGLKGDPGLDGLPGNPGPPGHEGPPGLPGDPGLDGPPGPIGSPGE PGQPGWAIQGVKGDRGEPGPVGERGLPGYPGAKGEPGRDGRDGPVGEPGLPGQGNIPGPP GRDGTPGPVGEPGSPGHPGPPGIDGLMGEPGQPGYPGEPGPVGPIGEPGPPGWQGDPGIP GLPGFKGDQGPPGQPGFPGRSGEKGDKGERGYPGLPGPAGFQGPMGPKGQSAIAIPGEAV PGPMGEPGERGHPGIPGDPGIPGEPGLKGEKGEPALIGMPGPAGPPGRDGLQGPPGPRGL TGRDGPMGREGPAGPPGAATWDLVEEQVGSLVVIHSQSMEIPVCPLRLKEIWNGYSLLYL DGNGRAANQDLGNPGSCMQRFSTMPFVFCENTDTCNYAARNDRSYWLSTMRPFSTRPVFG REISEHISRCAVCEVPNYTLAVHSQSREIPQCPAGYTNLWHGYSWAMHTGAGAQGGGQPL ASPGSCLQHFSPVPFVECNGARGSCSHFSNKLGFWMAQIDPQRMFNMPTTSVNEEKHTPL QNLVSRCSVCMKNI NT seq 5445 nt NT seq  +upstreamnt  +downstreamnt atgcgagagcggccgcgcgcccgctggaaggccctggcgcaatcaaacgccgcttctctg cgaggccagcgacaatcggctacattaagtgctcgaatcagtgataacttgtttgaatcg aacctcctaattacaggattcattttggcggcaacatttacgctgaccaaccaacaacac caatattcagatttttacaagaaggatcacgaaccgaattctataatagcccaaagccaa gtgagagacgcattatgttcggactgctcaccagaatcgagacgatgtatcggcgaacga ggtctgactggaatccgcggccagaagggccttcccggccctatgggaccaccggggcct cccggtgatgaaggtctgcagggcgaaaagggagaacaaggtttaccaggactagctgga atgaaggggggacgtggtgatcctggacgtagaggcgtttccggcctgcacggagagcca ggacagcctggaatgcctggtgagcccggaagacctggcttacgcgggaaggacggctac aatggaactcgtggtgacgtcggtatgataggatttccggggccaaaaggcgcggatgga agaccgggaataatgggtccacccggccaaaaaggagaacctgcgtatggaggtgtaggt gctaagggagaaaaaggctcaccaggtattcccggacctcaaggaccgccaggtatcact ggtcaagacggttttccaggtagaaagggtgatcctggaccttctggaaacgatggtcgt cccggtcagcctgggttacctgggccaccaggtatgtccttaccaggccaaaaaggcgaa agggggtttaaaggcgaaccaggcctaccgggcgaatcagcccattgtttcaaccggtca attatggttgacaacgaaggttctgaacaaattatcttcactcctggcccaaaaggagat aaaggagatcgaggcgagcctggtgaaggtagttcacctggagcacccggagcacctggt ataccgggacaacccggtctgccgggtgaaaaaggtgaccgaggtctgccaggcgatcta gggccagcaggagtaccaggttacccgggtagtccaggtttacaaggcctcaagggcgac cctggtatcccaggccggccaggacgaccaggtgaacctggacataaaggagaagtggga cctccaggacttcccggagagatgggactaacaggacctcctggagcgcccgcgacggcg gaaggaaacacgatcggtcccccaggcttcaaaggggaaaaaggcatgccaggcccaatg ggtcctccaggtgaagagggtagacccggggatttaggattggatgggtctcccgggcca cccggtgcaccaggggaacctggccagcgtggcaacgatggtcatcctggtccccgcggt gaaaaaggcgattctggacttcaaggttatcccggccaacctggaagccctgggctgcct ggtccagaagggctacctggggaaaaaggattacccggacgagacggttattccatcccc ggagatcggggattgcctggctcgcctggtaaagacggagaacctggagtgccaggacga cctggctccaaggggctacctggcatccccggtgattccctctatggccaaccaggtttt ccgggagaaccgggaccagaaggtcccaagggagtagcaggcaggcccggccaaccaggt gtgccaggtattcctggacttaaaggagataaaggaggtgtctgtaatgcttgcgagccc ggtatacccggtctgaagggcgcgcctggatacccaggtgagcctggaccaaaaggcgac gcgggacttccaggaagccctggtcgagcaggtgaccgtggctttgatggataccctggc gaacgaggagcgccaggagagatggggatgccaggtttgatggggatgcctggccaaaaa ggcgagcgaggtttagactacatctatgacggacctaatgagaaaggaccgccaggtcca cctggccctccaggataccctggtaccccaggtgaccctggaccggaaggtcctccggga cctcaaggtgcttccggacctccagggtacgatggtctacaaggccaacctggtttacca ggcgacccaggtccaactggacctcgtggcgataaaggtgatccaggtctgccaggctat cccggttatggcgaacgcggtccgccaggcctgctcggagaaccaggtcctccaggaatc gaaggtccaaaaggagacaaaggagagaagggtgatccagcacccgaggccataaaattt aaggaaaggggtctacctggaccccctggtgataggggtcctgtaggtatggaaggtcct ccaggaccacgtggtctaccaggactaaatggaatagacggacaaccaggtcaagatggc ccgccaggtgagcctggcttccctggagcaccgggtcctcgtggtcctcctggcctaccg ggctcacccggaccgatgggggttgaaggactgcctgggatgcaaggcccaatcgggatc aaaggtgaacgtggtcgccctggtttacccggcgagttgggaccccctggagaccgtgga acaggcctacctggactaaaaggcctacctggacctcctggtcctcccggtgaagcagga ttgcctggcccagtcgggcgtgaggggtatccagggccgtctggactacccggcgagccc ggccccaaaggagaacaaggactgcctggtcgagatggacttcctgggctaaaaggagat caagcacaggaaggccaacctggccctaaaggagatcgcggtttgccaggtattcctggt ccacccggcaatccgggcaacgatggactaccgggtcacccaggagcttcaggtctgaag ggtgatcaaggcccacagggtcccccaggtaacccaggaacaacaggcaagcccggttca gatggagctgatggactccgcggtgagccagggctacctggaccacgcgggccgaaagga gaccctggcaacccaggaaaccctgggttgcctggagtacagggcccacccggtgttgag ggacaacctggtaaacccggcctacctggtatgcctggcaaagacggcccaccaggtttt gctggctttgtaggtcatccaggccagaaaggagacagaggtcttcctggacgtgatgga ctgaaaggtgaatctggaagagcagcccaaaaaggggaacgcggtagacccggaattccc ggaacacctggagcagaaggtccatccggctctccaggtccccaagggccgcctggcgag aaaggcgaaaaaggtcttccgggagaaggtcgtcctggcgaaccaggaccagaaggactc ccaggaatgcctggtcttccaggtattgatggtccaccaggacccccagggcctgacgga ccccccggattacctggaatgcctgggaataaaggagatgctggagccgcaggtgatcct ggaccgcctggtgctcctggagcgcctggagctaccggattgcccggtccgcctggatat cgaggaataaagggtaacccaggactcgacggtccaccgggaatgcctgggcaagaagga attgtaggagctcctggggaaccaggatacccaggttacattggagagccgggcaaccca ggagaaccgggccggcctggaccacctggtaatccaggtttcccaggtcctcccggacct caaggtcctaaaggcaacatcggtcctgtgggaactccaggtttagctggactaaaagga gaccctggtttagatggccttcctggcaatcccggtccccccggccatgaggggccacct ggactacctggtgacccaggcctagacggcccaccgggtccaattggctctcctggagag cccggacagcctggctgggcaatacagggcgtaaaaggagacagaggagaaccaggccct gtaggggaacgaggattaccagggtaccctggtgctaagggcgaacctggtcgggacgga cgagatggtcctgtaggagagcccggactacctggtcaaggtaacattccgggacctcct ggaagagatggtacgcctggacctgtaggagaacctggttctcctggccatccgggtcct cccggtattgacggcttaatgggcgagcctggccagcctggctaccccggcgagccagga ccggttggacccatcggtgaacctggtcccccaggatggcaaggagacccaggcattcct ggtcttcctggctttaagggcgatcaaggaccgcctggacagcccggttttccaggtaga agcggtgaaaaaggagacaagggtgaacgaggttatccagggcttccaggaccggctgga ttccaaggaccaatggggccaaagggtcagtcagcaatcgcaatccctggtgaggctgtt cctggtccaatgggagaacccggagaacgcggccaccctggaattccaggggatcccgga atcccaggagaacccggcttgaaaggggaaaagggtgaaccagctcttattggaatgcct ggtcctgcaggcccaccaggaagggatggcctacaaggaccacctggacctcgtggtctt accggacgcgacggccctatgggtagggagggccctgcaggcccaccaggggcggctacg tgggatttggttgaggagcaagttggatcgttggttgttatccactcccagagcatggag ataccagtgtgcccactccgccttaaagaaatttggaacggatattcattgctttatttg gacggaaatgggcgggcagctaatcaagaccttggcaatccaggatcatgtatgcagcgt tttagtacaatgcctttcgtgttctgtgaaaacacagatacttgtaactatgctgcacgt aacgatcgctcgtattggttgagcacaatgcgtccattctctacgcgacccgtttttggc cgagaaatttccgagcacatctcgcgatgcgctgtttgtgaagtacccaattatacgctc gcggtgcacagccaatcacgtgagatccctcaatgcccggcaggctacactaatctatgg catggttattcgtgggcaatgcacacaggtgctggagcgcagggcggtggacaaccactt gcctcgcctggttcctgcctacagcatttcagtcccgtgccgttcgtcgagtgcaatggt gcccggggatcatgctcgcatttcagcaataagctaggcttctggatggcacaaatcgat cctcaacgaatgtttaacatgcccaccacaagcgtaaacgaagagaagcacacacctctt cagaatctcgtatctaggtgttctgtgtgcatgaagaatatttaa

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