Varroa jacobsoni: 111261887
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Entry
111261887 CDS
T07417
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vja03036
]
111261887
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111261887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
Hira
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT122_1st
WDR55
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
HIRA_B
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
111261887
NCBI-ProteinID:
XP_022691459
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MVKLFKPSWVNHDGNPIFSVDVHPDGSRFATGGQGQDCGQVCIWNMGPVLRADEEKKDSI
PKLFCQLTNHLACVNCVRWSHDGRFLASAGDDKTIIIWQIGRTISGPGSYGAAFGKANVE
QWRTVACLKGHDGDILHVAWSPASDEYIASCSVDTTVVVWNTRRWHERVAVLRGHQGFVK
GVCWDPLGKYVATQSDDKTVRLWRTHDWQQECVISTPFEETGGTTHVLRLSWSPDGQYVV
SAHAMNNGGPTAQIIERGGWRTVKDFVGHRRAVTVARFFPSILKSATSTTNSSGDSKQYL
ADMFNCLAIGSRDRSVSIWRNDRKRALCVVHDLFTNSVVDLAWNPLTQQLLACSSDGSLA
VLDFSAHELGKAVTQEEQTGLFQRLYGLEGAGQAGQLAGLGLNTLLVENVDVLKAHGKAK
TNGVTPTTAVPRTDVSQTTQSNPSMVSSQRLAKGPTDRQIETILPDGRRRITPLYIPLDS
VGPEGGEGGPPLTFSSSRQEKSKILVEKRENSSCSLPPVPATVATPQPQVCSGPDLTIAP
SKQNQSSQVSQKPSQPPQQQQQQPPPVHTQQMTQPGPVIASNAAVDGKAKPKRIRPTLVS
APGGQPIGTNGLQSISYQDNASPTPIQSEDVNAQQRFSSVTAAAVSHQVSGPMQLPVNGA
LVLGAQVYPALQLRQPCVINIELGLTVQITINIPVAGGWTMSRIVCTKIVTGSTSATEGA
PISQELWDTVLEGRVCAAAASVNLTALVDSEGHLVLLCTRSGRRLVSPLVLSGQAAMITC
RGCRIAVLTVDGMLTLYEVSRPEPEIGVSSRADAPSSECSYSASLASLVYGDGRGCYRRL
LSESVRSIMSANKSATLRSLDLLQPQGLPLLSLSNGRNYFFDQEASSWSLISWTSGVISR
CSDHYAALPVDSTPNQKGPLERIQGSLLRSTASRTMSSLQANPSIQRSATLAFLESELNG
ARVLSSPSEFRFWALALVRFLASEGLEARLRLALDDIIAADGFHNETELSSVSARQMLAD
VLPVIAANLRLQRVYLEYKQRLELLQGARTHGKLPRVSSLRARQAAAVAKPPRRPSPQPE
NVSIAVGGVENGTSGAGTGTTTPKQPTPGVQPRKRGRPPKNRGISKIARVEQRAEPVEET
EVDAQGPLAINGTVQENNNHNNNGCTTQAGSTLTNEVKEVLTHKQLNGDNNSSSTNEIDG
DDRKIESTSKDAPTAAVGDLVITEANGGKSGSPSMATSGGSVCRVLQGVLKAIEKEEERE
QRQDHDDTTIPLVTSQPISAADAAAVATTTTTTTTTTATTAVLTETANTATSIANGS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaactcttcaaaccaagttgggttaaccatgatggcaatccgatcttttcagtc
gacgttcacccggacggaagccgttttgcaacgggaggtcagggtcaagactgcgggcag
gtgtgcatatggaatatgggtcctgtgttacgagccgacgaggagaaaaaggatagcata
ccgaagctgttctgtcaactgactaatcatcttgcctgcgttaattgcgttcgctggtct
cacgacggccgttttctagcttcggctggtgacgataaaacaatcatcatttggcagatc
ggtcgcacaattagcggacccggatcatatggcgctgcatttggaaaggctaatgtcgaa
cagtggagaaccgtggcttgtctgaagggccacgatggagacattcttcatgtggcgtgg
tctcctgcaagcgacgaatatattgcatcctgttctgttgatacaacagtcgttgtgtgg
aatactcgtcgatggcatgaacgtgtagccgttcttcgaggacatcaaggatttgtcaag
ggcgtctgttgggacccattagggaagtacgtagcgacgcaaagcgatgacaaaactgtg
cgactttggcgaacgcacgattggcaacaggagtgcgtcatttcaacacctttcgaagag
accggcggtacaactcatgttttgcgcttaagctggtcaccggatggtcagtacgttgtg
tcagcacatgcgatgaacaacggcggaccgacagctcaaatcattgaacggggcggctgg
cgaaccgttaaggattttgttggtcaccggcgagcagtcacggtggcccgattttttccc
agtatacttaaatcagccaccagcacaacgaattcttctggcgatagcaaacagtatctt
gcggacatgttcaactgtttggcgatcggatctcgggaccgttctgtgtccatatggcgt
aacgatcgtaagcgtgcactctgcgttgtacatgatctcttcacgaattcagtcgttgat
ttggcgtggaacccgctcacgcaacagctgttggcatgttcgtccgatggcagcttagcg
gtacttgacttttcggctcatgaacttggcaaggcagtcacccaagaagagcaaaccggc
ctttttcaacgtctgtacggccttgaaggtgccgggcaagcggggcaactggcaggattg
ggtctcaatactttacttgtggagaatgtcgacgtgttaaaggcacatgggaaagctaaa
accaatggagtgactccgacgacagctgttcctcgaacggatgtctcacagacaacacaa
agtaacccgtctatggtttcttctcaacgtttggcgaaaggtcccacagatcgacagatc
gaaacaattcttcccgatggccgacgtcgcataaccccattgtacattcctctggactcg
gtcggacctgagggtggcgaaggcggacctccattgacattcagcagttccagacaagag
aaatccaaaattcttgtcgagaaacgggaaaactcatcttgctccctgcccccggtacca
gctactgtagcgacaccccaaccgcaagtgtgttccggcccagaccttactatcgcccct
agcaagcagaaccagtcttctcaggtctcacaaaagccttcacagccgccacaacagcag
caacaacaaccaccaccagttcatacacaacaaatgactcaaccgggtccggtaatagcg
agcaatgctgctgtcgatggaaaggcaaagccgaagagaattcggccgacattggttagt
gctcctggcggccagcctattggcaccaacggactgcaaagcatctcttatcaggataat
gcgtcccctaccccaattcaatcggaggatgtcaacgctcagcaaagattctccagcgtc
accgccgccgccgttagtcatcaggtatctggtcctatgcagctaccggttaatggagct
cttgtgcttggcgcacaagtataccccgcattgcagcttcgtcagccgtgtgtgataaat
attgaattagggctgaccgtgcaaattacgatcaacatccctgtagcgggcggatggacg
atgtcacgcattgtgtgcaccaaaattgtcaccggatcaacatccgctaccgaaggtgcc
ccgatatcgcaagagttgtgggacacggtcctagaggggcgtgtctgtgcggcggctgct
tccgtcaatctgacggcgttggttgattccgagggtcacctagtacttttatgcactcga
tctggtcgcagattggtatctcctctggtattgtctggccaagcggccatgataacctgc
cgaggctgcagaatcgcggtgcttacggtggatggaatgctcactctttatgaggtttca
agacccgaaccggaaataggcgtgtcatccagggctgacgcaccgagcagtgaatgcagt
tattctgccagccttgctagtctggtttacggagatgggcgcggttgttatcgacgtttg
ttgtcggaaagtgttcgatcaattatgagtgccaacaaatcggcaacactgcgttcactt
gatcttctacagcctcaaggacttccgttgctgtcactttccaatggtcgtaactacttc
ttcgaccaggaggcttcgtcgtggagtttgataagctggactagcggcgtgattagtcga
tgttcagatcattatgccgcgctacctgtggatagcaccccgaatcagaagggaccttta
gaacgaatacaaggatcacttcttcggtctaccgctagccgcacgatgagcagcctccaa
gcgaacccctcgatacaaaggtcggcaactcttgcctttctggaaagcgaactcaacgga
gctcgtgttctgtcatcaccgagtgagttccgcttctgggcattggcccttgtgcgtttc
ttggcctctgaaggccttgaagcacgacttcgattggcgttggatgacatcattgctgcc
gatggatttcacaacgagaccgagttaagttctgtcagtgcacgccagatgctcgcggac
gtccttcctgttatagcggccaatctgcgattgcagcgcgtctaccttgaatacaaacag
cgattggagttgcttcaaggggccagaacgcacggcaaactgccgcgcgtaagttcacta
cgtgctcggcaggccgcggccgtagcgaagcctccacggcgacctagtccacaaccggag
aatgtttctattgccgtcggcggcgtggagaacggaacgtcaggcgccggaactggaaca
actacgcctaaacaaccgactcctggtgtgcagccaagaaagagaggtcgtcctccaaag
aatcgtggtatttcaaaaattgcacgtgtagaacagagggcggaacccgtagaagaaact
gaggtggatgcgcaaggtccgttagctataaacggtacggtacaagaaaacaacaaccac
aacaacaacggatgcacgacccaagctgggagtacactcacgaatgaagtgaaagaagtt
ctcactcacaaacaactaaatggtgataacaatagcagcagtacgaacgagatcgatggc
gatgatcgaaaaatagagtcaacaagcaaagatgcaccaacagcagcagtgggggatttg
gttatcacagaagccaatggcggtaaaagtggctcgccgtcgatggcaacaagcgggggc
tccgtctgccgggttcttcaaggagttctcaaagctattgaaaaggaggaggagcgcgaa
cagcgtcaggatcatgacgacacaacgatacccctggtaaccagtcagccgatatcagca
gcagacgctgcagcagtagcaacaacaacaacaacaacaacaacaacaacggcaacaaca
gctgttctaactgaaacagcaaacactgccaccagtatagcaaacggcagctag
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