Varroa jacobsoni: 111262027
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Entry
111262027 CDS
T07417
Name
(RefSeq) integrin alpha-PS2-like isoform X1
KO
K06584
integrin alpha 8
Organism
vja
Varroa jacobsoni
Pathway
vja04512
ECM-receptor interaction
vja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111262027
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111262027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vja04515
]
111262027
Cell adhesion molecules [BR:
vja04515
]
Integrins
Integrin alpha subunits
111262027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP_3
LYRIC
DUF3995
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
111262027
NCBI-ProteinID:
XP_022691730
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MAMLRHPLARLLCLGYCVILGVRAVNVDLAHVLMHSGPEHSKFGFSVAMHISDGRPMLLV
GAPTSATGRSDSQEGGVVFSCAVDSERCSPVDLDTEGVRRNQSGAPLENKAHQWFGSTVV
SGGEDGHVLACAILYQHYYSGDPSVYRLPIGNCFLANGNFNHVVRLSPCEGKTPHHTRLG
ACQAGFSAAVDKKSGQVVLGAVGAYQWQGAGYAFDIAKPKDPVHTPKKGIRFDDQFMGYA
TAIGEFTGDSRPAFLLGIPKGADYNGSVEMYQRRGNRLAKLEPTFIGGQLGSYFGSALAV
SDLNGDNLDDIIVGAPLFSSFEVRNEHEQGRVHIYYQEAPLEFHEGEPLKGKVPNGRFGF
AVAALGDINKDGFKDIAVGAPYGDHGGLVYIYHGGKGGISAKASQIFGPADFSRSGQIST
FGFSLSGGLDLDKNGYPDLLVGAYGSNKALYFRSRPIIHIKPQFKIDANAIRLEDEGCLL
PDGTTLPCLNLELCFRFDAPSNVDSINIGYQFSLDTEARTSRLSFENTQERLLNSTVTVR
RGNYECIQKKAFIKRNPADKLSPIRVDVAYALVQPSSPDSYPFQDYTAELTPVLSTTQPL
EATVIIKKNCGADDVCIPDLRLSMAPNITEFEVGSTRQFAVEISASNAGEDAYNTKMLFT
FHNDLDFVKVDKDNRQDPVTCSGAKRVSAFYQHVLCDLDNPLKAGDSLNFRMIFAANKHV
PSVTSFEFSAALNSTNDEQGNTKADNVITFTLPVKVKINVVISGKSDPVEAFYNASSVDT
SRKVLTDLEVGPEIQHVYQITNRGHDLDLADIYLVWPTHNPDNEPLLYLLERPQFKASRP
ALISCESTDHINFNANKVLVTESQRRTPRDISRFLDDISCGQPSKCGQFRCQVRNFTSSD
VVIVTVNSRLWLQTVAKMRVDQVSIASKIVVKPIKLRFDVQSELPHELFYVQTTAVAEDL
LVAPGIPWWIIVLAIIIGILLLALLVWCLYKAGFFRRRRPGEPIDERGTKNGYHTVETVP
RDEHRY
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttgcgacatcctttagcccggcttttatgcctcgggtattgtgtgatactc
ggtgttcgtgcagtgaatgtggacctggctcatgtgctcatgcacagcggccctgaacat
tccaaatttggattttccgttgctatgcacatttctgatggaaggccaatgttacttgta
ggcgctccaacaagcgccacaggccgatccgacagccaggaaggtggagtggttttcagc
tgcgcagtagattcggaacggtgctcaccagttgatctggacactgagggggtgcgacga
aatcagtcaggagcgcctttagagaataaagcgcatcagtggtttgggagcaccgtagtc
agcgggggcgaagatgggcatgtattggcatgcgcaatcttgtaccagcattattactcc
ggcgatccatctgtatatcgattaccaatcggaaattgttttctggccaatggtaatttc
aatcacgtggtacgtctgtcaccttgcgaagggaaaactccacaccacacccgactggga
gcgtgtcaggcaggattttccgctgccgttgacaagaaatctggccaagtcgttctcggc
gccgtgggtgcttaccagtggcagggcgccggttatgcttttgatattgcgaagcctaaa
gatcctgtgcacaccccaaagaaaggaatacggttcgatgaccagttcatgggttatgcc
acagcaataggcgagttcactggtgatagtaggccagcgttcctactaggaattcctaaa
ggggccgactataatggcagtgtcgaaatgtaccagaggcgcgggaatcgtttggcgaag
ttagaaccaacttttattggcggacagctgggttcatacttcggatcagcgcttgctgtc
agcgaccttaacggtgataacctggacgacatcatcgtgggggctcctctctttagtagt
ttcgaggtccgcaatgagcatgaacaaggacgtgtgcatatctattatcaagaagctccc
ttggaattccacgaaggagaacctttgaaaggcaaggtccctaacggtcgttttggcttc
gcggtggctgctcttggagacattaataaggatggatttaaagatatcgcggttggagcc
ccgtacggagaccatggcggtttagtgtatatttatcacgggggtaagggtggcatttct
gctaaagcttctcagatatttggccccgcggattttagtcgtagcggccagattagcacg
ttcggattctctttgagtggcggcttagacctcgacaagaacggctatcctgatctactc
gtcggcgcttatggaagtaacaaggcgttgtattttcgcagtcgaccaataattcacatt
aaaccacagttcaaaattgatgccaatgcaattcgtttagaagacgaaggatgcctttta
cctgatggaactacgctaccttgcttaaatctcgagctttgttttcgattcgatgcgccc
tccaatgtggattccatcaatataggataccaatttagtctggacacggaagccaggacg
tcgcgcttaagcttcgaaaatacgcaagagcgtttgctgaattcaactgtcaccgtacgc
aggggaaactatgaatgtatccagaaaaaggccttcattaaacgtaatccagctgacaaa
ctgtcaccaattagagtggacgtagcctacgcattagtgcagccatcatctcccgacagc
tatccgtttcaggattacacagcggagctgacccccgttctgtctacaactcagccattg
gaagcgaccgtcattataaaaaagaactgtggcgcggacgatgtttgcatacctgacctt
cgactctccatggctccgaatatcacggagttcgaagttgggagtacgcgccagtttgca
gtcgaaatttcggcttcaaacgctggtgaggacgcttacaataccaaaatgttgtttacg
ttccacaatgacttggactttgtcaaagttgacaaggataatcgccaagatccagttacg
tgttcaggagctaaacgcgtatcggcattctatcagcatgtcctatgtgaccttgacaac
ccgctaaaggctggcgatagccttaacttccggatgatttttgctgcaaataaacatgtg
ccctcggtaacatcgttcgagttttcggcggctctcaactcgacaaacgatgaacagggg
aatacgaaagctgacaacgtcatcacatttactttgccagttaaggtcaagattaatgtc
gtcatctccggtaaatctgatcccgtggaggcattctataacgcatcgtctgtggatacc
tcacgaaaagtgctaacagaccttgaagtgggccccgaaattcaacatgtctaccagatc
acaaacagaggccatgatcttgatttagccgatatctatttagtttggccaacgcacaat
ccggataatgagcctctattgtatcttctcgaacggcctcagtttaaagcatctagaccg
gctttaatttcttgcgaatccacagatcatattaacttcaacgccaataaagttctcgtt
accgaaagtcaacggcgaactcctcgagatattagccgttttcttgatgacatcagctgt
ggtcaaccctcgaagtgtggacaatttcgctgtcaagtacgaaattttacctcgtcggac
gttgtcatcgtaaccgtgaattcgcggctttggctacagacagtagccaaaatgcgagtg
gaccaagtgagcattgcctcaaagattgtggtgaaaccgatcaagctacgcttcgacgtg
caatcggaactgccgcatgaactattctacgtgcaaacgaccgctgtagcagaggattta
ttggtggctccaggcattccctggtggatcattgtccttgcgataatcatcggcatcctg
ctacttgcactgcttgtttggtgcttatataaggcgggctttttccggcgaagacgtccc
ggtgaaccgattgatgagcgaggaactaagaatggatatcatactgtcgagaccgtgcct
agagacgaacatcgttactag
DBGET
integrated database retrieval system
