KEGG   Varroa jacobsoni: 111262038
Entry
111262038         CDS       T07417                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
vja  Varroa jacobsoni
Pathway
vja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111262038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vja03041]
    111262038
Spliceosome [BR:vja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111262038
 Complex B
    111262038
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_9
Other DBs
NCBI-GeneID: 111262038
NCBI-ProteinID: XP_022691742
LinkDB
Position
Unknown
AA seq 429 aa
MGEDRDRDRDRRRRSRSRDRGRDRSRERRRSRSDSRGRRGAQGGGACGKLRRKKPSLYWD
VPAPGFEHITPLQYKAMQASGQIPATLLAPPITTDHQPSQPVVGSTITRQARRLYVGNIP
FGCTEQEMIDYFNVQMHACAFAQAQGNPVLACQINMDKNFAFLEFRSIDETTAAMSFDGI
NFKGQSLKIRRPHDYQPMPGMSEQPGSVIPGVVSTVVQDSPHKVFIGGLPNYLNEDQVRE
LLMSFGQLKAFNLVKDTASGLSKGYAFCEYADAAITDEAIAGLNGMQLGEKKLIVQRASV
GAKNSSMAAPVQIQVPGMASGVPGSSGPATEVLCLMNLVTPDELRDEEEYEDILEDIQEE
CSKYGHVKSIEIPRPIDGVDVNGLGKVFVEFNSIADCQKAQQALTGRKFSNRVVVTSYFE
PDKYHRRQF
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgggcgaagacagagaccgagatagggacagacggcgccgttcaaggtcacgggatcgc
ggccgcgaccgctcccgggaacgccgacgctcgcgatcagattcacgcgggcgtcgcgga
gcccaaggcggcggcgcctgtgggaagctgcgtcgaaaaaagccatcactttactgggac
gtgccagcacctggctttgagcacatcactccgctgcagtacaaagcgatgcaagcgtcc
ggacagatcccggccacgctattggcaccgcctatcactacagatcatcagccatcccaa
ccggttgtgggcagtacgatcactcgacaggcacgacgattgtacgtcggcaacattccg
tttggatgcactgaacaggagatgattgattatttcaatgtgcagatgcacgcctgcgcc
ttcgcgcaggcccaaggcaacccggtactggcgtgccagattaacatggataagaacttt
gctttccttgagttccgttcaatcgatgagacgactgcggctatgtcattcgacggaatt
aatttcaagggtcaatctttgaagatccgtcgtccgcacgattatcaaccgatgccagga
atgtcggagcagcctggctccgttatacctggcgtggtgtccactgtagtgcaggattcg
ccacacaaggtattcatcggtggacttccaaattacctaaatgaggatcaggttcgcgaa
ttgctgatgtctttcggacaacttaaggcgttcaatcttgtcaaagatacagccagcggc
ctatcaaagggatacgcgttctgcgaatacgccgatgcagcgatcacagacgaggcaatc
gctggcttgaacggcatgcagcttggcgaaaagaagctgattgttcaacgagcatcggtc
ggtgccaaaaactcgtcgatggccgcaccggtacaaattcaagtaccgggaatggcgtcc
ggcgtacctggttcctccggtccagccaccgaagtgctctgcctaatgaatcttgtgaca
ccggatgaacttcgcgatgaagaggaatatgaggatatactcgaagacatacaggaggaa
tgcagtaaatacggtcacgtgaaaagtatcgaaattcctcggcccattgacggagtcgat
gtcaatgggcttggcaaagtgttcgtcgagttcaactcgattgccgactgccaaaaagca
caacaagcgctcaccggccgaaaattcagcaatcgcgttgtggtaacatcgtattttgag
ccggacaagtatcaccgccgtcaattctaa

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