Varroa jacobsoni: 111262044
Help
Entry
111262044 CDS
T07417
Name
(RefSeq) transcription factor Sox-1-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vja03000
]
111262044
Transcription factors [BR:
vja03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111262044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111262044
NCBI-ProteinID:
XP_022691749
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MASTSSPPAWQQWPPAAPGHDASGACHCQYCANGGSCGSPHRDYYERGTRSPRVAPDASD
MHADDLRQTPEHRQGAGLAPGSLAGGLPGTIPGLGMGQGGQPLDRLSLMSAERGLPPADR
PSSAQTVKTEFKTEFKPDFEQSRQQFFEQQFFGITESTAEALKQIGQPSPSSPSQTHLGQ
DFMSRSSYQPGGQAAQRPSSKKDADRVRRPMNAFMVWSRGQRRKMAQENPKMHNSEISRR
LGAEWKLLSEAEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLMKKEKYAAPTAPSVG
QGPTDSAGLLQRNQLQANRLPGIQNNIMPLADSTRDLYSSVGSYTPQGYPLASDFYNVSM
YQQSQMNPLYQRYDQYTYPGYGFGYSAQPGTPGQQSVRSDDSGAATPNGSPGSTPGSVNL
SGSSSALSGLSGLPGASGSLSGNINSNLGLNLGSNLASSLPGLGAGLNGRSAVAPPSTPG
SVPSGGHAAQPGSPAAAGPMVAPGAGQPGSSVGLDLSGGMASAAGIVTARRYQNGPDLRD
MISVYLQPGHQGTAEAGAQS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacatcgagtccacccgcttggcaacagtggccaccagcagctccgggccac
gatgcatcaggtgcatgtcattgccagtattgtgcgaacggtggttcatgtggttcgccc
catcgggactactatgaacgaggaacgaggtcgcctcgagtcgcgcccgacgcttcggat
atgcacgccgatgacctacgtcaaacaccggaacaccgccagggagcaggccttgccccg
ggatcactagcaggaggcctacccggtacgatacctggcctcgggatgggccaaggaggt
caacctttggaccggctaagccttatgagtgctgagcggggcctacctccggccgatagg
ccatcgtccgctcagacagtgaaaacggagtttaagacggagttcaaaccggactttgag
cagtcgcggcagcagtttttcgagcagcagttcttcggcatcaccgagtcgaccgccgag
gcgctaaagcagatcggccagccttctccgagttcaccgagtcagacacacctgggtcag
gatttcatgtccagaagttcgtaccagcccggcggccaggcggcacagcggcccagcagt
aaaaaggacgcggaccgggtgcggcggcctatgaacgcgtttatggtgtggtcgcgcggc
caacgcaggaaaatggcccaggagaacccgaagatgcacaattccgaaatttcgcgaaga
ctgggtgccgagtggaagctgctgtccgaggcagagaagagacctttcatcgacgaggcg
aagcgtctgcgagccgtccacatgaaggaacatccggattataaataccgaccaaggaga
aaaacaaagacgttgatgaaaaaggagaagtatgccgctccaacagcgccctcggtaggc
cagggtcctaccgattcggcgggactcctgcagcgtaaccagcttcaggctaaccggctc
ccgggaatacagaacaacatcatgcccctcgcagactccacgcgcgacttatactcctcc
gtgggttcgtacactccacagggctatcccttggctagcgatttctacaacgtgtcgatg
taccagcaatcgcagatgaaccccctctaccagcgctatgaccagtacacttaccccggc
tacggtttcggctattcggctcagcccggtacaccgggtcagcagagcgtgcggagtgac
gatagcggtgctgccacgcccaacggttcgcccggctccactccaggttcagtcaacctc
tctggaagctcttcggcgctgtccggactctccggacttccgggagcttccgggtccttg
tccggtaatataaactcgaaccttggtctcaacctcggctccaacctcgcctcgagtctg
cctggtctaggcgctggtctcaacggcaggagtgcggtggcgccgccctcgacgcccggc
tcagtaccgtctggcggccacgcagctcagccgggatcgccagccgctgcaggcccaatg
gtcgcgccaggcgcaggccaacccggcagttcggtcgggctagacctcagtgggggtatg
gcgtccgccgcaggtatcgtcactgcccgtcgataccaaaacggtccggacctcagggac
atgatatcggtctacttgcaaccgggacaccagggaacggccgaggctggtgctcaatcc
taa
DBGET
integrated database retrieval system