Varroa jacobsoni: 111262062
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Entry
111262062 CDS
T07417
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vja03036
]
111262062
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111262062
Meiosis-specific proteins
Cohesin complex and associated proteins
111262062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
TACC_C
AAA_27
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111262062
NCBI-ProteinID:
XP_022691771
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MEKSPKKLRLISLSIEHFRSFEYAYVVRFSPKVTAIVGPNWAGKSNILKALVFGLGQSGE
EMFVDDIRSLINDNYLKRCQNIGDDGFCSVAILANVDGEEINFKRRLYQDLRESFQINDE
PYDAAKYRDKLFEYGIRVDSWGLVLRQGSIQNIGGKTPKEMSAFLEKMSGSHLLAADVKE
ADKKLRKTLGALVNAKSELGRLRLTRQRYKNFANAEQLWHEVNNKEQLLDLARLRGTDEK
IRICQNEIFNFPESEEEQERQRLQELKLERLVIQKQLKKNIETITNEERLLATAQDTLQK
ISTIKQRFASLHSEAKQQLGDLNARRAKIEVAISEAKADQQQAQIKLPGVKKKVESARNA
LEPIQVDTDIFVELRNLEGAFYQEHRENLQQVESLEERRQSHMMTYDNLSVALKSEELKL
DSMNDELQELELRRTKYKSSFDSVNFNLERARSFFENRRATFDTAYNSYASQVKKTRELT
MQRDYICGRAKRTNSRRHTERILDGLTATFGNHVVGVLGNLIIPCKPEYMAAVRKVLGRY
RYSIVVDSRTVMRQCLSFLKESNEPVMPVLVLPSTAPKWRPLPKSLTGRALMFESICMVT
QSIPLHLQNRVLYLIRDLYSDVVFCNEPNTIKKLTMNKPQKCSVVMSDGNFLSRSGVFES
AKKEKTSGEPGHAAAITEVNEKLAEATICLRETEATLENLQELGDLEHGYELLVDCYQDA
EKRLEILSKEIESKEGDLDVLVRGVESALASLRECTLTGEIEKKKLRPIETIEKRIRDQR
QQLLKVFGAKFDIPLSTLLKLANSDAVKAERHSLIKDAESLKRLELTLDKAETDICRHED
DLKKIDRELESVISKEQHARTDAEGAQAELTKVQQAVDSTLSTLDKLKIQDNLFKQQLVD
ATAAVTSASQDCARRRRVANKLQTEIAKLRSDRASLLAQYVEKLPRERKEDFFGATFDDL
VMMQVDYTDLPEDVCTLRKIDKFCNETELLVSELRVLLLESRVSVPDPTSATRHENRYKG
TVTKVKELMRKAAKEKKTLSKLVTRRAEIFTTFIEKLQEKVAQTYNELTNGGWMTIIVGG
GGSDPSQAFDAGVLLDCRPHGGQFTEFANLSGGQKNQASLALLLAIHSVLQLPFLALDEA
DAPLSSQHCRILSLYLHNQQQQVILVSHRSGTLNRPAFRELTYSVVGVTRGPTTSGNEED
TRIYYACLDRLFDKGEEFHRAPSIDSIYLTDEQLAEIDNAASEQELQSVESMASGT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtcgcctaaaaaactgcgacttattagtttgtccattgagcattttcgatcg
ttcgagtacgcgtacgtagttaggttcagtccgaaagtaacggccatagtggggccgaac
tgggctgggaaatccaatattcttaaagcacttgtgttcggcttgggtcaaagcggagaa
gagatgtttgttgatgacatcaggtctcttataaacgacaactacctaaaacgatgccaa
aatattggtgacgatggcttctgttcggttgcaatcttagctaatgtggacggagaggag
atcaattttaaaagacgattgtatcaggatctcagagagagtttccagatcaatgacgag
ccatacgatgcggccaaataccgcgataagctgtttgaatatggtattcgagtggattcg
tggggacttgttctccggcaaggatccattcagaatataggaggtaaaactcctaaggaa
atgtccgcttttttggagaagatgtctggatcacatttgcttgctgcagatgtcaaagaa
gcagataaaaagctgcgaaaaacgctcggagccttagttaatgcaaaatcggaattagga
agactgcgccttacgagacaaagatataaaaattttgctaatgcagaacagctttggcac
gaagttaataacaaagaacaactcctggacctggcgagacttcgggggacggatgagaag
attcgaatttgccaaaacgagatcttcaattttcccgaaagcgaggaagaacaagagagg
caaaggctgcaagagcttaaactcgaacgtcttgtcatccaaaagcagttgaaaaagaac
atcgagacaatcacaaatgaagaacgattattggcaacggcacaggatacgctgcaaaaa
attagtacgataaaacagcgctttgcttcgctacactccgaagctaaacaacaactggga
gatcttaacgcccgcagggctaagatcgaggtcgccatcagcgaggcgaaggcggatcag
cagcaggcacagataaaactacctggcgtaaaaaagaaggttgaatctgctcgaaacgct
ttggaacctattcaggtggatactgacatctttgtagagctgcgaaatttggaaggcgct
ttttaccaggagcatcgagaaaacttgcagcaagttgaatcgttggaggaacgtcgtcag
tcacacatgatgacttacgacaatctctccgtggcattaaagagcgaggagctaaaactg
gactcgatgaacgacgaactacaggagcttgagttgcgacgaacgaaatataaatcgtcc
ttcgatagtgtgaactttaacctcgaacgtgctcgaagcttttttgaaaatcgtagagca
acatttgacacggcttataacagttatgcttcacaagtgaagaaaacgcgtgagctcact
atgcaacgcgactatatctgtggaagggcaaaacgtacaaattctcgtcgacacactgag
cgaattcttgatgggctaacagcaaccttcggcaatcatgttgtcggtgtacttgggaat
ctgataataccctgtaagcccgagtacatggccgctgtacgcaaagttctcggtcggtac
aggtattccatagtcgtggactctcgaacagtgatgcgacaatgcctctccttcttaaaa
gaatcaaatgagcctgtgatgcctgttcttgtactgccttccactgcaccaaaatggcgt
ccgctgcccaaaagtttaacaggtcgagcattaatgttcgaaagcatctgcatggtcaca
caatcgataccgttgcacttgcaaaatcgcgtgttatacctaatcagagacttatatagt
gatgttgtattctgcaacgaacctaacacaatcaagaagttaacaatgaacaaaccgcag
aagtgctctgtggttatgagtgatgggaattttttgtcgagaagcggtgtatttgaaagc
gccaagaaggaaaaaacatctggagagcccggccatgcagctgccatcacggaggtcaat
gagaagcttgctgaggcaacgatatgtttaagagagaccgaagctactttggaaaatttg
caggagttaggtgatctcgaacacgggtatgagttactggtcgactgctatcaagatgcc
gaaaaacgactggaaatattaagcaaagaaattgaaagcaaggaaggagaccttgatgta
ctcgtacgcggggttgaatcagctctagcgagccttcgggaatgtactcttaccggggaa
atcgaaaagaaaaagctacggccgatagagacgattgaaaagagaattcgggatcagaga
cagcagttattgaaagtgtttggtgcgaagttcgatataccactatccactcttcttaag
ctcgccaactccgacgcggttaaagctgaacgacattctctaataaaggatgcagaatca
ctgaagcgacttgaactcacgctcgacaaagctgaaactgatatttgtcgtcatgaagac
gatctaaagaaaattgaccgtgaactcgagtcagtgatctctaaagaacagcacgcccgt
accgatgcagaaggagctcaggcagaacttaccaaggtgcaacaggcagttgattccacc
ctatccacacttgacaaactgaaaattcaagataacttgttcaaacaacagctcgttgat
gctaccgccgctgtcacatctgcaagccaagactgtgcgcgtcgtcgtagggtggcaaac
aaacttcaaaccgaaatagcaaagttgagatcagatcgggcttcgcttctcgcgcaatat
gtggaaaagttgcctcgcgaaagaaaggaagatttcttcggagcaactttcgacgacctt
gttatgatgcaggtagactacacagatttacctgaagatgtctgtactctcaggaagatc
gacaagttctgtaatgaaactgaattattagtctcggaacttcgtgtgctgttactggag
agtcgtgttagcgttcctgatccaacctccgctactagacatgaaaaccgttacaaaggc
actgtaacaaaagtgaaagaactcatgcgcaaagcagcaaaggaaaagaagacactaagc
aagctcgtcacacggcgcgctgagatttttacgacgttcattgaaaaactgcaagaaaag
gtagctcagacctacaacgaactaactaacggcggttggatgacaatcattgtcggtggc
ggtggctctgatccttcgcaggcctttgatgctggggttctactcgattgtcgaccgcac
ggggggcaatttactgaatttgccaacctgtcaggcggccaaaagaatcaggcgtcgctt
gcgttacttttggcaattcattcggttcttcagttgcctttcctggcgcttgacgaggcg
gatgcccctctcagcagccagcattgccgaatcctttctctatacctccataatcaacag
cagcaagtcattcttgtctctcatcgctccggaactttgaatagacctgcttttagagag
ctgacttattccgtcgttggtgtgactagaggtcccacgacgagcgggaacgaagaggac
actcgaatttattatgcgtgtctcgatcggcttttcgacaaaggtgaagagttccatcga
gctccatcgatcgatagtatctatcttacagatgaacaattagccgaaatagacaatgct
gcctccgagcaagaattgcagtcagttgaatcaatggcatccggaacgtag
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