Varroa jacobsoni: 111262341
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Entry
111262341 CDS
T07417
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111262341
03036 Chromosome and associated proteins [BR:
vja03036
]
111262341
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111262341
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111262341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
HHH_3
SH2
HHH_9
Spt6_S1
Tex_YqgF
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
111262341
NCBI-ProteinID:
XP_022692264
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MSDFIESEAEESSEEEQTDETRLHKKKGRPAAQIDSDEEEDDEEKLAEEMKDLINDDEEE
EEGSSGSSSGSSSSGESGEESGREDVGEGGHKEKKHKRKHDYDDDNIDDDDFDLIEENLG
IKVQRKKKLKRVKVLDEDEEEEGDKEKDKDELAQELFEDGDEDMDETASRADRDSSRHPE
DIHRSQDEDLGTESGSDDDVNDFIVDDDGQPITKTKKKRHVKYSDSALQEAQDIFGVEFD
YEDVRGYDDEFEGSEEDEEYEDEEEQEPGARPAKASKAAGKKAAAKKSIFEVFEPIELEQ
GHFTDRDQEIRTTDEPERFQLRGVPVTQADETELAEEAEWIFRQCFLKPTISIQKPPLGS
DSSDSGDRSSSGHQPLGGKKSRTAVNKICETLKFMRNQHFEVPFIAFYRKEYVQPELTIN
DLWLIYKWDERWCHLRQQKLNMEKLFKKMQEYICEQILNDDSAADNLRQIEETDFERLRE
VQSSEELKDVYLHFLLYYAQDLPAMQEAAMLKQKQKREEVRRKRLEKQKEKAARQAEGGD
GADEESADDELEDEDDGEKEELFLKRAKQKDCFAVCRELGLHGLAKKFGLTPQQFGENLR
DNYQRHEVVQFPVQPLEAAAEYVNDRLNTPAECLKAARYMVACEIARDPTVRRCVRETFF
ERAKLSVTPTKTGIKEIDESHPCYAFKYLKNKPVRSLQGDQFLKLKMAEDDKLIKIFVRM
DGEGASDSGSYAHDVRQLYHRDEFSKNVQEWNGQREEALNYALNRLLYPTLEKELKLRLL
REAFDHVLRACANKLYNWLKIAPYEPPEEVQEEEDFDTRDGVKILAIAYQNDWNIPAFGA
LISGEGEVTDYIRLENLLKRRNARRETEREGKQRDMEKLKRFLADKKPHCVVISAESREA
LSVKEDVEQAIRELSEEEQFPPLQVMLLDNELAMVYATSKRAEQDFAQYPPLLKQAVSLA
RRMQDPLIEFSQLCGHDEEILCLKYHPLQDNVPKEEFEWVLAMELINRTNEVGVDINRCV
EQSHTSGLLQFVSGLGPRKAYAIIKNLKQTHSKLEGRSNLVTSLKLGPKVFLNCAGFIRI
DTNSFESSSSAYVEVLDGSRVHPEMYEWARKMATDALDYDDNDEANLNPAEALEEILDNP
DKLKDLDLDAFAIELERQGYGNKSITLYDIRAELNHRYKDLRVDYAPPEKEVLFNLLTKE
TPETFYLGKLVTCQVSGIARKRPQGDQLDQANPIRNDESGLWQCPFCLKNDFPELSEVWN
HFDAGNCPGPAMGVKVRFDNGITGFIPTKNLSDKRVANPEERVRVGQIIHGRVTKIDIAR
FAVELTTKSSDLADKNGEMKPPKDLYYDHDADDKERRKADDAQKHKQRQVYVKRVIVHPS
FHNISYQEAVKLLKTMDQGEIVIRPSSKGVDHLTVTWKVHGDILQHIDVQEKGKENSFSL
GSSLIINGEEFECLDEIIARHVQPMAGFAKDIASFKYFFDFEGGKKEQAEKWLQEEKRKA
PAKIPYCISACANLPGKFLLSYQPSTKPRHEMVTVTPDGFRYRSQVFHSLNALFRWFKEH
FRDPIPLGGSSASAVTPGAASTHPYMTPGMATPGRMSAVPMVMATPGMATPGARTPASIA
TASYAAAYNAAGAGYGATTAGFGGMTPQPMQISTTPGYVTPGQSYAGNYGGSMPPPTTPS
SSYHRNPQSSSRSHHGSPSPSPRPSPRSHQSSGSTRSGGGSSSRDQHGSSSSLAGAGRSA
EDWKKMAVDWASGKSRNQGGARRD
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttcatcgaaagtgaagcagaagaaagctccgaggaggagcagaccgatgaa
actcgtcttcataagaaaaaagggcggccggctgctcaaatcgactcggacgaagaagaa
gatgatgaggagaagttagccgaagaaatgaaagaccttatcaatgacgatgaggaagaa
gaggaaggctcatcaggatcttcgtcaggttcatcgtcgtcgggtgaatctggcgaagaa
agcggacgtgaagacgtaggagaaggcggccacaaggaaaagaagcataagagaaagcat
gattatgatgacgataacatcgacgacgatgatttcgacctcatcgaagaaaaccttggt
ataaaagttcagcgcaagaagaagctcaaacgtgttaaggtgctcgatgaagatgaagaa
gaagagggcgataaagaaaaagataaagatgaacttgctcaggaattatttgaggacggt
gatgaagatatggatgaaaccgcttcgagagctgacagagattcatctcgacatcctgaa
gatattcacagatcacaggatgaggacctcggcaccgaatcgggatcagatgatgatgta
aatgattttattgtcgatgacgatggccaacccataacgaagaccaaaaagaaacgtcac
gtcaaatattcagacagtgctttacaggaagcgcaggacatcttcggggttgagtttgac
tatgaggatgttcgtggatatgatgatgaattcgagggttctgaggaggatgaagaatac
gaagatgaggaggagcaggaacctggcgctaggccagctaaggcttccaaagctgctggt
aaaaaggctgctgcaaagaagtctatctttgaagtatttgaaccgattgaactggaacag
ggtcacttcaccgatcgagatcaggaaattcgtacaactgatgaaccggagcgttttcag
ttgcgtggagtacctgtcactcaagctgacgaaacggaacttgcggaagaggcagagtgg
atctttcgtcagtgttttcttaagcccacgatttctatacaaaagccgccgctgggctcg
gactcgtccgatagcggtgatcgctcatcgagtggtcaccagccactgggaggtaaaaag
agccgtacagccgtcaataaaatctgcgagacactcaagtttatgcgcaaccagcatttc
gaagttccatttatcgctttttatcgaaaagagtacgtccaaccagaactaacaattaat
gacctgtggctaatctacaagtgggatgagcgctggtgtcatctccgtcaacaaaaacta
aacatggaaaagctgtttaagaagatgcaggaatatatctgtgagcagattctaaacgac
gactctgccgctgataatttgcgacaaattgaggagactgacttcgaacgactccgtgag
gtgcagtcttcggaagaattgaaggatgtgtaccttcattttctcctctactatgcccag
gatttgcccgcaatgcaagaagctgcgatgcttaagcagaaacaaaagcgggaagaagtc
cgtcggaaacggctcgaaaaacagaaagagaaagcggctcgccaggccgaaggaggtgac
ggcgccgatgaagaaagtgccgatgacgaacttgaggacgaggacgacggtgaaaaagaa
gaactatttttaaaaagagcaaaacaaaaggactgctttgctgtttgccgagagctaggt
ttgcatgggctcgccaagaagtttggtcttactccacaacaatttggtgaaaaccttcgc
gacaattatcagcgtcatgaggtggtccaatttcctgtgcaacccctggaggcagctgca
gagtatgtaaatgatcgtttaaatacacccgctgaatgtcttaaagccgcaaggtatatg
gtggcctgcgaaatcgcccgtgatcctacggtccgtcgttgtgtacgggaaactttcttc
gaacgagccaaactgagtgtcacaccaacaaagacgggaattaaagagattgacgaatcg
catccctgttacgcctttaaatatttaaagaacaagcctgtccgttctctacagggagat
cagttcctaaaattgaagatggctgaagatgacaagctaatcaagatctttgtccgtatg
gatggtgaaggcgcatcggattcaggctcgtatgcccatgacgtgcgtcagctttaccat
cgtgacgaattctcgaaaaatgtccaagaatggaatggacaacgagaagaagctctaaat
tatgcccttaatagattgctgtatccgacactggaaaaagaacttaagttgcgactactg
cgagaagcattcgatcacgttttaagggcgtgtgcgaacaagctttataactggctcaaa
atcgcaccatatgaacctcccgaagaagttcaggaggaggaggatttcgatacacgtgat
ggcgtgaagatactggccatcgcctaccagaacgactggaacatcccggcattcggagcc
ctaattagcggcgaaggagaagtaactgattacattcgattagagaatcttctcaagaga
cggaacgctcgtcgtgagactgaacgtgagggaaaacaacgagatatggaaaaactgaaa
cgattccttgcagataagaagcctcactgcgtggtaatctctgcagaaagtcgagaagcg
ctgagcgtcaaggaagacgtggaacaggccatccgggagctttctgaagaagaacaattt
ccgccgctgcaggtgatgcttttagataatgagttagctatggtttacgccacctcaaag
cgagccgaacaagattttgcgcaatatccacctttgctaaaacaggccgtatcactcgct
cgtcgtatgcaggatcctctcattgagttctctcaattgtgcggccatgacgaagaaata
ttgtgtttgaaatatcaccctcttcaggacaatgtgccaaaagaagaatttgaatgggtt
ttagctatggagcttattaatagaacaaatgaggtcggtgtagacattaatcgatgcgtt
gagcagagccatacatcgggactactgcagtttgtgtctggccttggaccgcgtaaggcg
tatgctattatcaagaacttaaaacaaacgcattcgaaactcgagggccgctcaaatctc
gtaactagcttgaaacttggccctaaagtgtttctcaattgcgctgggtttatccgtatc
gacacaaactcattcgagagtagttcgagtgcttacgtcgaggtgctagatggctcgcga
gttcatcccgaaatgtatgagtgggcacgcaaaatggcgacggacgccctcgattatgac
gacaatgatgaggcgaacctcaatcccgccgaggcgctagaagagatcctcgataatcct
gataaactcaaagatcttgatctcgacgcatttgctatcgaacttgaacggcagggctat
ggcaacaagagtattacattatacgacattcgggctgagctaaatcatcgttataaagat
ctccgtgtcgactatgcgccgcccgagaaggaggttttgtttaatttgctaactaaagag
acaccggagaccttctacctgggcaagctggttacgtgtcaggtatctggtattgctcgc
aaaaggcctcaaggggaccagttggatcaggctaatcccatccgtaacgacgagtctgga
ctatggcaatgtcccttctgtctcaaaaatgatttcccggagctctccgaagtgtggaac
cacttcgatgcgggtaattgtccaggaccggccatgggtgtcaaggtccgtttcgacaac
ggtattacgggcttcatcccaacgaaaaacctgtcagataaacgcgtcgctaatccggaa
gagcgcgttcgtgttggacaaatcatccatggacgtgtgacgaaaatcgatatcgcacga
tttgctgttgaactgacaaccaagagttctgatctcgctgataaaaacggtgagatgaaa
ccaccaaaggatttatattatgaccatgacgcagatgataaagagcgtcgcaaggcggat
gatgcacaaaaacataaacagagacaagtttatgtcaaacgtgtgatcgtccatccttca
tttcataatattagttaccaagaagcagtcaaattgttaaagaccatggaccagggcgaa
atcgtcattagaccatcctcgaaaggcgtggatcacttgaccgtaacgtggaaagttcac
ggagacattttgcagcatatcgatgtgcaggagaaaggaaaggaaaatagtttttcgctt
gggtcatcgttaattataaacggcgaggaatttgaatgcctcgacgaaatcatagctcgt
catgttcagccaatggctgggttcgcaaaggacattgcttcttttaagtatttcttcgat
ttcgagggcggtaaaaaggaacaagccgaaaaatggctacaagaagaaaaacgaaaagca
cctgcgaaaattccttattgtatttccgcctgcgccaatttaccaggcaagtttctactt
tcatatcaaccaagcacaaagccccggcacgaaatggtgacagtcacaccggatggtttt
cgttatcgaagccaggtgttccattcgttaaacgctctgttccgatggtttaaggaacat
tttcgggacccgatcccgcttggagggtcgtcagcatcggcagttactcccggcgccgca
agcacccacccatatatgacaccagggatggcgacgcccggtcgaatgagcgccgtacca
atggtaatggctactccaggtatggccacacctggagcccgaaccccagcttctattgcg
acagcgtcctatgccgctgcttataacgctgctggcgcaggttatggagcaacgactgcc
ggcttcgggggtatgactccccagccaatgcagatctcgacgacacccggctacgtgaca
cctgggcaaagttacgccggaaactacggcggatcaatgcccccaccgacaacgcccagt
tcgtcgtatcatcgaaatcctcagtcatcgtcacgatcgcatcatggatcgccctcacca
agtccgcgaccatctccgcgttcacaccagtctagcggatccacgcgttccggtggaggc
agtagtagcagggatcagcacgggagcagctcgtccttagctggcgcaggacgctctgct
gaagactggaaaaaaatggctgtcgattgggctagcggcaaatcgagaaaccagggcgga
gctcgacgagattaa
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integrated database retrieval system
