Varroa jacobsoni: 111262343
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Entry
111262343 CDS
T07417
Name
(RefSeq) uncharacterized protein LOC111262343
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111262343
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111262343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Regnase_1_C
RuvA_C
Motif
Other DBs
NCBI-GeneID:
111262343
NCBI-ProteinID:
XP_022692265
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MEAELSVCNVDVPLLKRCLQRLLVLFDCLSQIEDEHDGTLRLRLWTHHKKQDSLKNAQEF
LLSVISENPASERSYIVTSLDRLNQLYIVRGEIERDACVIVSARENELTANGPLANVLRA
MRLVEELLCTKHGNQMLENLVLRSGSKPPITSDPFLSEATGPGPMIGGSDGRRDGRVTRR
VESEDSSYDSDTESGLGPGTRSQSSQGASHGALSPGMATAPNNVQQLHKHDDVSRTVSDT
LGAEFAEYISTQKVELKAVLADPGYQARLEFALKLGYTEAQVQTALQKLGLNAANNELLA
ELIKLSSSVSKDDQTPVAPIAGGDQPGGVAGSASSGGELRPIVIDGSNVAMSHGNKDVFS
CRGIRICVDWFRARGHTELTVFVPSWRKESARPNTPIADQEILLQLEREKLLVFTPSRNV
GGKRVVCYEDRYILNLATENDGIVVSNDNYRDLVLEKAEFKRVVEERLLMYSFVNDRFMP
PDDPLGRQGPTLDQFLRKPSVAPQQTVPPICPYAKKCTYGNKCKYYHPERGNMPQKSITD
RLAEQWKIMQEGKARNLHIGGNELTRTRSVPVTSAGDLSVPAANNSGARKKQLSRTRSAA
PPQRPLTHDDFGTPTIGSGATGGLGEPRSRPKDDFAIWQAFVDSLPSTPLSRYSSWSNLP
PPNKTAHVGESGHLTLAKKLSDPSESHQDVNISSLSSAGLGATSVVPSDTGNNLHKKLQR
QLTLNPTCDDRLAQMRMANGPAGIGQPSGQSIGGSGGGPPGGPRTTASHQNVSRLSSDGS
SSAFRGAHGETGNSSTFSDGGWQVGLLSGQNSTSDTRLNMFPNQFVTPTCYQPSIWSSPP
PPAQQGVHGLRPSSLPPQNRMRAPLITPPGQSLSKTTTPFGTAASDNSSGAEGGGGGGGV
GPGVLWTYGALEQRSKVYYHLTSIFPEAQVNAALELHPDGLNAPKICATILAMFPSKS
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaattgagcgtctgtaatgtcgacgtgcctctactgaagcgctgtcttcag
aggttactcgttctgttcgattgtctctcacagatcgaggatgagcacgatggcacactt
cggctacgtttatggacccaccataagaagcaggattcgctgaaaaacgcgcaggagttc
ttactatcagtgatatcggaaaacccagcttcggaacgtagctatattgtgacatcattg
gaccgtcttaaccaactgtatattgtgcgaggcgaaattgaacgggatgcttgcgttata
gtgagtgcccgtgaaaacgaactgacggccaacggtccactagctaatgttctaagagcc
atgcggctagtcgaagaacttctctgcaccaaacatggaaaccagatgctcgaaaactta
gtgctccgcagcggctcaaagccgccgataacctcggatcctttcttatctgaagcgacc
ggacctggcccaatgatcggtggctccgacggtagaagggatggacgcgtcactcgtcgc
gtcgagagtgaagactcgtcgtatgattcggatacagagagcgggttaggtcccggcacc
cgatctcagagctcccagggtgcttcacatggagcgctaagtcccggcatggccacagca
ccaaacaacgttcaacagctccataaacatgacgatgtctctcgaacagtgtccgacaca
ctcggggccgaattcgctgagtatatcagcacgcaaaaagtcgaactcaaggcagttcta
gccgatcctggctatcaagcaaggcttgagttcgctttaaagttaggctacacagaagcg
caggtacaaactgctctacagaagttgggcctgaatgcggcaaataatgagttactcgcc
gagttgattaaactatcctccagcgtgtccaaagatgaccaaacgccagtagcgccaatc
gcaggaggcgatcagcctggtggagtagctggcagcgccagtagcggtggcgaattacgg
cctatcgtaatcgatggctccaatgttgcgatgagccatgggaacaaggacgtgttctct
tgtcggggcattcgaatttgcgtagattggttccgcgcccggggtcacaccgagttgacg
gtgtttgtgcccagctggcgcaaagagtcggctaggccgaacacacctattgccgaccaa
gagatccttttacagctagaacgagaaaagctgctagtgttcacgccgtcacgaaatgta
ggcgggaagcgtgttgtctgctatgaggaccggtatattctaaatctggcgactgagaat
gacggaatcgttgtctcgaacgacaactaccgagacctcgttctagagaaagcggaattt
aagcgagtggtcgaagagcgcttgcttatgtactcgtttgtgaacgatcgattcatgccc
ccagatgacccactcggtcggcagggaccaactctcgaccagtttctacgtaagccttcc
gtcgcaccccaacagactgtacccccaatctgtccgtacgcaaaaaagtgcacttacggc
aataagtgtaaatactaccaccctgaaaggggaaatatgccacagaaatcaattaccgat
cggttagcggaacagtggaaaataatgcaggaaggaaaggcgcgtaaccttcacattggt
ggcaacgaactcacgcgaactcgtagtgttcccgtcacgtctgccggcgatctttcagtc
ccagctgctaacaacagcggagccaggaaaaaacagctaagtcgaactcgttctgcggcc
ccaccacaaagaccattaacgcatgacgacttcggtacacctaccattggctctggtgca
acaggtggcctcggagaacctcgaagtcgaccaaaagatgactttgccatctggcaagcc
ttcgtagatagcttgccgtcaacgccgttatcccgttactcgagttggtcgaatctgcca
ccaccgaacaaaacagcgcatgtcggcgagtctggccacctgacacttgctaagaaattg
tccgacccttctgaatcacaccaagacgtgaatattagctcgcttagctctgcgggattg
ggagctacctcagtagtaccgagtgataccggcaacaacctgcacaaaaaactgcagcgc
caattaacgctcaatccgacctgtgatgatcggctagcccaaatgcgaatggcaaatggt
cctgcaggcataggccagccatcaggccagtcaataggtggaagcggtggtggacctcca
ggcggaccgcgaacaactgcgtcgcatcaaaacgtctctcggcttagctccgatggatcc
tcatcggcatttcggggagcgcatggagagacgggaaacagtagcacgtttagcgacggt
ggctggcaagtcggattactttccggccagaactcaacatcggacactaggttaaacatg
tttcccaatcagtttgtgacacccacctgctaccagccaagcatctggtcgtctcctccg
ccaccggcgcagcagggggtacacggcttgcggccatcgagtctgcccccgcagaaccga
atgcgggcacctctcataacgccacctgggcaaagtctctcgaaaacgacgaccccattc
ggaactgcggcttctgataattctagcggagcagaaggaggcggtggaggagggggtgtt
ggcccaggagttttatggacgtacggcgctttggagcaacgaagcaaggtttactatcat
cttacatccattttcccggaagcgcaagttaatgctgccctggaactgcatccggacggg
ttgaatgcgccaaagatctgtgccacgatcctggcgatgttcccatcaaaatcgtag
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