Varroa jacobsoni: 111262350
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Entry
111262350 CDS
T07417
Name
(RefSeq) ice-structuring glycoprotein-like
KO
K14307
nucleoporin p58/p45
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111262350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111262350
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111262350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
111262350
NCBI-ProteinID:
XP_022692279
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MAGFNFGGSQPPASGGFGFSFGSNTSTAGSAFGQPAVSAPSTNFTFGSATAGTAPNANPF
GTPSTTGAVATTGGFGAFSTPGGATVTPTFGSSQLPSAPTFGTPTQQSSTPGFGQTATSP
FGSSLVFGTQPAVSFGGFGQTQQQQQTPASGTASNFTFGGGSTTTSAFGAPGVAASTAPA
FGSTTAAPTFTFGQTLQQQAAPTQPNFSFGSVAQPVSQASSTFSFGQPATSGVQTTAFGQ
PTGQTMSAFGQSPAFGQTQVSAAPTGASAFGQTTGTSAFSFGSNTTATSAPQTTPLNFGQ
PASTAPTPSGFSFGQSPATPAVSAAPAGLSFGQPAASAAPTTTTAFSFGQAAPATTGISS
GFFGTPSTMTTASLSSFGGFSTPAISTTAAAPATATGGFSFGNTPVQPQVSNAPAAPTTT
ATGMFGLSATTTAPTLGFSFSTPAQATTATVTTTPAVPAAGGFTFGTSTVTTTAVASATI
SSLSFGLNSATPTTTSAASANALGGTGLGAVTTKPTLTTSFTGFGTPTTAATVAPTAGTT
ATTAASSILGGVGLANAVSGLATSTAMVATTSTPSLRVGAAITSTTPAGLTATTTASATI
TTTAAAATTYSGFTFGVPTAPVAVTTTSATTTVAPAATPITTAALRTFTFGAATTTVCSS
TTTTAVAATPTSAETASVASGATSVSATPSIFGTPTGTISGLAAATVSTSAPTSTALGTV
PATTIATSGAASVTVTSKDQTVSDRPATVRDEKIPLELEQLVEALGKHRQQQKAIRDELD
KDTLIPVGKTQAEIEELRLRIGRIETGAQRIGGTLVKLKDEILRDRQDSKLACKTSQLRG
TGSAALFEDTKQIEYFNNMVMYFHQRLRTYRQQMVELQAHFKPLRSGFGSMGAACPPTNA
EVALIVKRLHETFVTLAAQIYNVHEQVLYADEFYQRRRKQSNLAGPSSSISLEIPTTRKG
PSPDKRRLEIDRNDPIGIGTSPNNTFTRHNQVASALHNISLRSGLDSSFQSGGPSGSMGV
VSIFTPVQSTVPSAGANAGLFGGGWNTSQTAIGVGPTNLFAANSSFNATQFGNSLQLQSP
PGANKRGKR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtttaattttggtggttcacagccgcctgccagtggaggttttggattttct
ttcggctcgaacacaagtactgctggttcagccttcggccaacctgccgtgtctgcaccc
tccactaatttcacgtttgggtcggcgaccgccggaacagctcctaacgccaatccgttc
ggtactccgtccaccacgggcgctgttgccacaacaggtggcttcggcgcattctcaact
cctggcggagctactgtgacacccacattcggatccagtcaattgcctagcgcgccgact
tttgggacccctactcagcagtcttcaacgcctggttttggacaaactgcgacttcaccg
tttggctcgagtttggtatttggtactcaaccggcggtctcgtttggcggatttggtcag
acgcaacagcagcagcagacaccagccagcggaaccgcatcgaacttcacctttggcggg
ggatcgactacaacaagtgcttttggcgcaccgggtgttgcggcttcaactgctccagcg
tttggcagcacaacagccgctccgacctttacattcggacaaactctacaacagcaggcg
gctccgacgcagccgaacttctcgttcggctctgtagcgcaaccggtaagccaggcctca
tcgactttttcgtttggtcaaccggcaacatcaggtgtccaaaccacagcttttggtcag
cccacaggtcaaacgatgtcggcatttggtcagagcccagcattcggccagacccaggta
tcagcagcgccaacaggtgcatcagcctttggccagaccactgggactagcgcgttttcc
tttggaagcaacaccaccgcaaccagcgcccctcagacaacaccactgaatttcggtcaa
ccagcttctactgctcctactccaagtgggttttcctttggtcagtctcccgctacgccg
gccgtgtccgcggcgccggcaggtctcagttttgggcaaccggctgccagcgcagcaccc
acgacaaccactgcattctcatttgggcaagcagctcctgcgaccacaggaataagctca
ggtttctttggcaccccgagtacaatgacgactgcatccctttcgtctttcgggggtttt
tcaacgccagctattagcaccaccgccgcggcacctgctacagctaccggcggtttctca
ttcggcaatacgcctgtgcagccgcaggtaagcaatgctccagctgctccgacaacgaca
gccacagggatgttcggtctatcagcaactaccaccgctcccacacttggtttctctttt
agtacgcctgcccaggcgacgactgctacagtcacgacgacgccggctgttcctgcagcc
ggaggtttcacattcggaacgtcaactgtgacaaccactgctgttgcttctgcgactatt
agttcactgtcgttcggccttaattcagccacaccgacaacaacatcagcagcttcagct
aatgcgcttggcggcactgggttaggcgcagtaacgacgaaaccaacactcactaccagt
ttcactggttttgggacaccaacgacagccgcgaccgttgctcccacggccggaacaaca
gctacgactgccgcctcttcaatacttggcggagtaggtctagcaaatgcggttagcgga
ctggcgacttctacggcgatggttgccaccacttctactcccagtctgcgcgttggtgcc
gctataacgtcaactacgcctgcgggcctgacggcaacaacgacagcttctgcgaccatc
actacaaccgcggcagccgccacgacgtatagcggatttacatttggggtcccaacagca
cccgtcgcagtaacgactacgtctgcgacgacaactgtcgcacctgccgctactccaata
acaacagctgctttaagaaccttcacctttggggctgcaacgacgacggtgtgctcgagt
acgacgacgacggcagtggcagcaactccgacgagtgcagaaacggctagtgtcgcaagt
ggtgccacttccgtaagtgcaacgccttcgatttttgggactccgacaggaaccatatca
ggccttgctgctgctactgttagtacatccgcccctactagcacggccttaggcacagtg
ccagcaacaaccatagcaacttctggtgctgccagcgttactgtcacaagcaaagatcaa
acagtatccgataggcctgctacggtaagggatgagaaaatcccactcgagttagagcaa
cttgtagaggcgctgggtaaacaccggcaacagcaaaaagcaattcgagatgaactggat
aaggatacgcttatccccgtcggaaagacacaggcggaaattgaagagctacgactgcga
ataggccgtatcgagacaggggcgcagcgtattggaggtacattagttaaattaaaggac
gaaatccttagggatcgtcaagattcaaagctggcgtgcaaaaccagccagctaagagga
actgggtccgcggctttgttcgaagatactaaacaaattgaatacttcaataatatggtc
atgtattttcatcagcgtctccggacgtaccgacaacaaatggttgagcttcaggctcat
tttaaaccattgagatccggttttgggtcgatgggagctgcctgcccacccacgaatgca
gaagtagcactgattgttaaaagactgcatgaaaccttcgtcacccttgcagctcaaatc
tacaatgtacatgaacaggtactatatgccgatgagttttatcaacgaaggcgaaaacaa
agtaatttggcaggacctagttcttcaatatctctcgagattccgacaacacgtaaaggc
ccttcacctgacaagaggagattagagatcgacagaaacgatcccattgggattggcact
tcaccaaacaacaccttcacccgtcacaatcaagtggccagtgccttgcacaatattagc
cttcggtcgggactggacagctcgttccaatcaggaggtccctctggttccatgggagta
gtctcaatattcaccccagtccaatcgactgttccgtcagcaggagcaaacgctggtctc
ttcggagggggttggaatacgagtcaaacagctattggtgtagggccgacaaatttgttt
gctgcaaattcctcgttcaatgcgacacagtttggaaactcgctacagcttcagtcgcca
cctggagccaacaagcgcggaaaacgctga
DBGET
integrated database retrieval system
