Varroa jacobsoni: 111262365
Help
Entry
111262365 CDS
T07417
Name
(RefSeq) uncharacterized protein LOC111262365 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
vja
Varroa jacobsoni
Pathway
vja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111262365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111262365
03400 DNA repair and recombination proteins [BR:
vja03400
]
111262365
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
111262365
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111262365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
111262365
NCBI-ProteinID:
XP_022692303
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MMKQILQIKRRKIPAVPASSIASSKARSTQRTLHALFTCTPEQRDAANRQRLHALLTQKY
GSPGRPPGENDGTNTIVTVGGNNPHHDNKNSNSNRLSTKDEDTGEAALLSTKRSMEGATV
KETKGKSLQRISSSQNHGRPDQQRQTNEACINLSHPLNSAIYTPARRQKRDISFVDQVPR
MYNLALGDDSNCSYVVPGFEEYVPHRGKQCSQRETTDRSSLQQQQQQQLEATNNKESENS
TVKAGSNKESRSTSANQEKESRRKEGRQSKNSRVGSKEPEKDSSKDGDSKARERPKEKKE
IAREVLSAAAVSDPKCSVKDVLKMSSAAGALITTNDEEKKPSGKGSQNESSRDGQNGSGQ
HRQRNRDHCEHRGSKRKKNFSRTLDSGTGSLHDKDKPCTISVETIQVMERGTVIACQPTA
PPTSSVSPPFAKKPCVMVSPTATEATAVTSTSTSDQRLPDNREISALREIVTNYQVPSIV
GGLPDKSPSCTPTHSVVAPLPADLDRRVLDWVDNCVSQKNNNGQKEQVTAMTSSTNGNSS
KKSSTRNTYDEGSLRDLQRSYLRLVDSEECSDLVIETEDRPIRAHKTILFVRCPKLTQTV
SADSSFWQLSWCCSEAVLLFLRFLYAADVSFVASVEGRVRKDLLTLCCQYQTDELAARLI
RERSPSPLPSQLQPAQMVQQHLGFVSRGASSATALLSRARGRKRCPSPSIRRRRVRLGSE
ISSENASDTGSSSGKKTRMSITCETVSVTAPTNDDRHRIQQSPRLPQPGVACTQHSTPLV
TPISDDDDEDIITSNSHINQNQTTPVRTTASLPRIISGSDSKSGAGENRSTVANESANGR
RGAGVPVSTTGGSADQPIDVGSSSDLFSDEDVVVGAIIQSQPPPLLSPIQPTPRRPPDEE
EEIDGNLLPSPPAFLRSVSQRLSSQRLSPERKSASSAAHSHAPPSSVSSVMSSPSTSTRL
LHRKSFSQPTPGHPLNDDDEDNDCNEEPDDLPNVAGLCEAVVSIGSSPTGSLSSPLGVSR
VVDGLDVTPQPRFSMMKTPEMHAQLNQYGIKPSIGKRKAVQILKHIYQTTHPEISHPDNE
RPEGEEATGERNTYSSSSDDSDGDLPLEETMIHDDDEEISDNVEDKITRYIRNTPSLYDK
ILRYEPLEVTDFKRELREHGIRVNDKTLVNLLDFHCINISFGAQRKTVSRSPRKARRKKT
VRKPAVQQQPLGQRSTMTQP
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcagatcctccagatcaaacggcggaaaatacctgccgttccggcgtcgtcc
atcgcgtcttcgaaggcccgttccacacagcgaacattacatgcactgttcacgtgtacg
ccggaacaaagggacgcggctaatcgccagagactgcatgcgctgctcacacaaaaatat
gggtcgccaggacggcctccgggggaaaatgatggaacgaatacgatcgttacggtaggt
gggaacaatccccatcatgacaataaaaacagtaatagtaatcgattgagcaccaaggat
gaagacaccggggaggccgcattgttgtctacgaaaagaagtatggagggtgccactgtc
aaggaaacaaagggcaagagtcttcagagaatttcttcgtcgcagaatcacggacgtcca
gatcagcaacggcagacgaatgaggcttgcataaatttgtcgcacccactaaattcggcc
atttatacgccagccaggcggcaaaagcgcgacatttcttttgttgaccaagtacctcga
atgtacaacctagctttgggtgacgattcgaattgttcctacgtggtaccaggatttgag
gaatatgtaccgcacagaggcaagcaatgctcgcaacgtgagacaactgatcgctcatct
ttgcagcagcaacagcagcagcagctggaagcaacgaacaacaaggagtcggaaaacagt
actgttaaagctggatcaaacaaagaatcacgttctacaagtgcaaatcaggaaaaggaa
tcacgacgaaaggagggcaggcaaagcaaaaacagtcgggtaggctcaaaagaacctgag
aaggacagttccaaagatggagacagcaaggccagggagagacccaaggagaaaaaggaa
attgctcgggaggttttgagtgcagctgcggtcagcgatccgaagtgttcggtgaaagat
gttttgaaaatgtcttccgctgctggcgctcttatcactacgaatgatgaagagaagaag
ccaagtggtaagggatcgcagaacgaatcgtcccgggacggccagaacggttcaggccaa
catcgccaacggaatcgagatcattgcgagcaccgagggagtaaacggaaaaaaaacttt
tctagaacattggatagtggaacgggaagcttgcacgataaggataaaccttgcaccatt
agcgtggagactattcaagttatggaacgtggaacagtcatcgcatgtcaacccactgca
ccacccacttcttcagtgtctccaccatttgccaagaagccatgcgttatggtttcgccg
acagctaccgaggcaacagctgtcacgtcaacgtctacttccgaccagcgcctcccagat
aatagagagatatcagccctaagagaaatagtcacgaattaccaggttccatcgatagtc
ggaggattgccagacaagagcccatcatgtacacctacccactccgtcgtagctccgttg
ccagctgatcttgatcgacgagttctcgactgggtcgataattgcgtttcccaaaagaat
aataacggacagaaggaacaagtcactgccatgacttcgtcgaccaatggtaatagcagt
aaaaaatcttccacgagaaacacgtatgacgagggctctttacgcgaccttcagcgttcg
tatctgcgacttgtggactcggaggaatgctctgacctggtcatcgaaacggaagaccga
cctattcgcgctcacaaaacaatattgttcgtacgctgccccaagcttacacagacggtt
agtgctgactcgagtttttggcaactatcatggtgctgctcagaggctgtccttctattt
ctgcgatttctgtatgcggccgacgtatcatttgtagctagcgtcgaaggccgggtccgg
aaagatcttctcacgctatgctgccaatatcagaccgatgaattggcagcacgacttatc
cgtgagcgatcacccagtccgttaccttcgcagttacaacctgcgcaaatggtacaacag
cacctgggttttgtcagccgaggagcaagttcggcaacggcgctgctctcgagagcacga
ggcagaaagcggtgcccgtcgccgagtatccgtcgtcggcgagttcgccttgggtcggaa
atatcatcggagaatgccagcgacactggatccagttctggtaaaaagactcgcatgagt
attacctgtgagaccgtgtcggtcactgcgccaactaatgatgaccgacaccgaatccag
caatcgccacgactgccgcaaccaggcgttgcgtgcactcagcatagcacgccactcgtc
actccaattagtgatgatgacgatgaagatattataacaagcaatagtcatatcaaccaa
aatcaaacgacgcccgtaagaacaactgcctcgttacctcgaattattagtgggagtgac
tcgaagagcggagccggtgagaatcgttcaacggtagcaaatgaatctgctaacgggcgt
agaggcgccggcgtaccggtcagcactacaggaggctcggcggatcagccgatcgatgta
ggtagcagttctgatctcttttccgatgaagacgttgtagtaggagccattatacagtcg
cagccacctcccctgcttagccccattcagccgacgcctcgacgtccacctgatgaagaa
gaggaaatcgatggcaaccttcttccatcgccgccagcttttttgcggtccgtaagtcaa
cggttatccagtcagcgactttcgccagagagaaaatccgcttcatcggcggctcattcg
cacgctccaccttcgtcagtttcatccgtgatgagctctccaagcacttctacaagactg
ttgcaccgtaaaagtttcagtcagcctacgccgggtcatccgttaaacgacgacgacgaa
gataatgactgcaacgaagagcctgatgacttgccaaatgtggctgggctgtgtgaagct
gtggttagcattggaagcagtccaacagggtctttgtcaagccctctaggtgtttcccgg
gtcgttgacggtttggacgttacgccgcaaccgaggttcagtatgatgaagacgccagaa
atgcatgctcaactcaaccagtatggtataaagcccagtattggcaagcggaaagctgtt
cagattcttaaacatatctatcagacgacacatccggagatttctcatccggataacgag
aggccagagggagaggaggcgacaggagaacgaaacacgtattcgtcgtcaagtgatgac
agtgatggagatctgccgttagaggagacgatgatccatgatgacgatgaggagatcagc
gataatgttgaggacaaaattacgagatatatcaggaatacaccatctttatacgataag
attcttcgctacgaacccttggaggtaactgattttaagcgcgagttacgtgaacacgga
atccgggtaaacgacaagactctcgtcaatctactggactttcattgtatcaacatctcg
tttggggctcagcgtaagactgtctctcgaagtccgagaaaagctcgacgaaagaaaact
gtccggaaaccggccgtgcagcagcagcccctcggtcaacgttcaaccatgacacaacca
tga
DBGET
integrated database retrieval system
