Varroa jacobsoni: 111262534
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Entry
111262534 CDS
T07417
Name
(RefSeq) structural maintenance of chromosomes protein 4-like
KO
K06675
structural maintenance of chromosome 4
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vja03036
]
111262534
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
111262534
Condensin II
111262534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
DUF745
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111262534
NCBI-ProteinID:
XP_022692595
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MAASDDSDPEMNSPPSKKRLSEERVAASARRSSKAEEPSSFRALAEPEAASVVEVFANAG
GNGESKQSPIGKSADPAAAQQKQVIVSVENQEKETYGSLECPAERSIRESGATEAVMSPS
TVTDGLKSPKRRCAVGGSVTENQPRRSRASAEMAQNTQQQQTQQQNQLNESAKLQQQSVQ
RARATSQKTVDEVFAGCERDEDGGIKIGNIYIPPPPPPACTFEAIGPRLIISKIENRYFK
SYGKHVIIGPLHKNYSGIVGPNGSGKSNVIDSMLFVFGYRSKKVRAQKVSNLIHNCDMHR
DIRSCTVDVHFETIIDNEDKFEIVPGSKLVIGRTAFRDNSSHYTLNGRQVSQKEVTKILR
QNGIDLEHDRFLILQGEVEQISMMKPKSESENDDGMLEYLEDIIGTNRYKEPIEAFVKNV
DALQEERNAALDRVNMAEQDMLAKKELRDEAIDFLRLCNDMTRCDQQLYEIARCDEKEKK
FGIEKQLDQAKATVEKIKKQMTEFLEENKRLTDAHKALCREEAEVLKQGETLQAQYTELE
TKDIKCREEIKHAKTAIKKLEKDQETQSKKIEKLRSDAIKLPEEKAAAEEAAKELIEEVA
NLEADLHSRMEDLNKQVSPIQEEKSTLEKNLLELQRAVNTAKSAFSMAQSELELMTSSSR
TEQRKLEERERALEEAQKKLQAKEEQVSKSKEALPSLKEAYEKVRHDLETVDREYEECRA
NYNSSRIKLEEMRSTNTATRTNNRLLDALMNEKRKGGALSGIIGRLGDLGGIDKEYDVAI
SMACGLLDSIVVDTTSTAKECIKYLQKHNLGKSNFLALEKMNHLIGQAKQSIRTPENAPR
LIDLVQLSDPAYLGVFYYALRDTLYVHDIDSATRVGLGGVQRFRVVTNKGEIVDPSGTLT
GGGGRTYGGKMGRKAKLDTSISDSEISALTSQVAEMESRMTILATRKDDTGRQLSQKKKE
LDQVIQMDQEVSLEVSALVEEIRSLEGRIKMQQKSVAEKTVDPVKLQQQETRVAETRQAY
EEAEKSTEADRKAVETLDKKINKIKEERIGNVKNKLEKAQRSLKEVEAKKTQCQVGINNS
ERMLVQAERKLADIAAEMATVQERRQKARELYDDLANQAQSINEQLEKANALKEELSGRV
AASARGLHDFNKQEGVLKIKQQEQKNIVKDLEKDHDQCCRVIEGCIRKIKALRLEIIDEG
DDEDAVASSDEAATLLPELTEEEVHKLDADSIEREKVRLSEIKKTMKPTLGSIAEYKAKM
SHYKKLSGVYLDKQQTLERHKSYLQALKKARLQEFLTGFKIITQKVKEMYRTITLGGDAD
LELVDSLDPFSEGIAFSVRPPRKTWKNISNLSGGEKTLSSLSLVFALHYYKPAPFYVMDE
IDAALDHKNVSIIANYINERTRNTQFIIISLREEMFSLARKLTGIYKPYNDTNTLTLDIE
HCLIGMASERDKENDPPAVTAVDT
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcagatgactcagaccctgagatgaattctcctccttcgaaaaaacggctt
tcagaagagcgcgtagccgccagtgcacgccggtcctccaaggcggaagaaccgtcgagt
tttagagctttagccgaacccgaagctgcttccgttgtagaagtatttgcaaacgcaggt
ggaaatggcgagtcaaagcaaagccccataggtaaatccgctgatccagcggcagcccag
cagaaacaagtcattgtatctgtggagaaccaggagaaggagacatatggctcgctggaa
tgtccagcagagcgctcaattcgagagagtggtgcaactgaagctgtgatgtccccgtcg
acagtgaccgatggattgaaaagccctaagcgacgttgtgcagtcggtggatctgtcacc
gaaaatcaaccgcggagatcgagggcctcggcggaaatggcacaaaatacccaacagcag
cagactcaacagcaaaatcagcttaatgaatctgcgaaattgcagcagcagagtgtacag
cgtgcgagggcgacctcgcaaaagaccgtggacgaagtttttgcaggatgcgaacgtgat
gaagatggagggatcaaaattggtaatatctacattcctccaccacctccaccagcgtgt
acatttgaagcaattggtccacggcttattatatcgaaaattgaaaatcggtattttaaa
agctatggcaaacacgtgattatcggacctctacacaaaaactattctggcattgtaggt
cctaatggaagtggtaaaagtaacgtcattgattctatgcttttcgttttcggttatcgc
tcgaagaaagtccgtgcccagaaggtgagcaacctgatccacaactgcgatatgcatcgg
gatataaggagttgtacggtggacgtacattttgagaccattatcgacaatgaagacaaa
tttgagattgttcccggttcgaaactagtaatcggacgtacagcattcagggacaactcc
tcacattacactttgaatgggcgccaggtgtctcagaaggaagtaacaaagatacttcgt
cagaacggtatcgacctagaacacgatcgattccttattcttcagggtgaagtggagcaa
atctcaatgatgaaaccgaaaagcgaatctgaaaatgatgacggaatgctcgagtatctt
gaggacattattggtaccaaccgttacaaggagccaattgaagcttttgtcaaaaatgtc
gatgctctgcaagaagaacgaaatgctgccctggatcgcgtcaatatggctgaacaagac
atgctagcgaaaaaggaacttcgcgacgaggctatcgatttcctccggctatgcaacgac
atgacgcgttgcgatcagcagctttacgagatcgctcgctgcgacgaaaaagagaagaaa
ttcggcattgagaaacagcttgatcaagctaaggcaacagtcgagaagatcaaaaagcaa
atgactgaatttcttgaagagaacaaaagacttacggacgctcataaagctttgtgccgt
gaagaagctgaagtgctaaagcaaggtgaaacgctacaagcacagtacaccgaactcgaa
acaaaagatattaagtgccgcgaggaaatcaaacacgcaaaaacggccattaaaaagctc
gagaaagaccaggaaacgcaaagtaagaaaatcgagaaattgagatcagacgcgatcaaa
ctccctgaagagaaggccgcggcggaagaggccgctaaggaattaattgaagaagttgca
aatctcgaagccgacttgcattcacgtatggaagatcttaacaaacaagtatctccgatt
caggaggaaaagtctacacttgagaagaaccttctcgagctgcagcgcgctgttaacacg
gccaagtctgcattctcaatggctcagagtgagctcgaattgatgacttcgtcttcgcgg
acagagcagcgaaaactcgaagagcgggaacgagcgttggaagaagctcagaaaaaactc
caggccaaagaggagcaggtctcaaaaagtaaagaggcgttacctagcctaaaagaggcg
tacgagaaggttcgacacgatttagagactgttgatcgagagtatgaggaatgtcgcgct
aattacaactcgagtcgaataaagcttgaggaaatgcgaagtactaacactgctactaga
acaaacaatcgacttctcgatgctctgatgaacgaaaaaaggaaagggggtgctctcagc
ggtatcatcggaagactcggagatcttggaggaattgacaaagagtatgatgtagccata
tcgatggcatgtggattacttgattcaattgtggtagacactactagtacggcaaaggaa
tgtattaaatacctacaaaaacacaacctcggaaaaagtaatttcttagctctggagaaa
atgaatcatttaattggtcaggcaaaacagtccatccgaacacctgagaatgcgccacgc
ctcattgatcttgtgcaattgtcggatccagcttatctcggcgtattctattacgctctg
cgtgacaccctctacgttcacgatattgattctgcaaccagagttggtttagggggtgta
cagagatttcgcgtggtcacgaataagggtgaaatcgtagaccctagtggaactctgacc
ggaggaggcggacgaacttatggtgggaagatgggccgaaaggcaaaattggatacatca
attagcgattcagaaataagcgccctgacgtcgcaggtcgcagaaatggaaagccgtatg
acaattctagcaacacgaaaagacgatacgggacgccagttgtctcaaaagaaaaaagag
cttgaccaagtaatacaaatggatcaggaagtctcacttgaggtctcagccttggtcgaa
gagattcgttctctagaaggacgaatcaaaatgcagcaaaaatcagttgctgagaaaaca
gtcgatccagtgaaactacaacaacaagagactcgggtagcggaaacccgtcaagcctat
gaagaggcagaaaaatcgactgaggccgaccgaaaagctgttgaaacactggacaaaaag
ataaacaaaattaaggaggaacgcatcggtaatgtaaaaaacaaactcgagaaagcccag
agaagtttgaaagaggtagaggcgaaaaagacacagtgtcaggtcggcataaacaactcc
gaacgaatgttggttcaagccgagcgcaagttggcggatattgctgctgaaatggcaacg
gtacaggaacgccgtcagaaggctagagagctctacgatgatctagctaaccaagctcaa
agcatcaatgagcaactagaaaaggccaacgcactaaaagaggaactgtctggtagggtt
gcggcttcggcccgaggtcttcacgatttcaacaaacaggaaggcgtccttaagattaaa
cagcaggaacaaaaaaacatcgttaaagaccttgagaaggaccatgaccagtgttgtcga
gtcatagaagggtgcataagaaaaatcaaggctcttcgcttggaaataatcgatgaaggg
gacgacgaagatgcagtggcttcctctgacgaggctgcaactctgctaccggagctcacc
gaagaagaagttcataaactggacgcagattcaatcgaacgagaaaaagtgagactaagc
gaaatcaagaaaacaatgaaaccaaccctaggatcaatcgccgagtacaaagcgaagatg
agccattataagaaactgtcgggagtatacctagataaacagcaaacactcgaaagacat
aaaagttatttacaggcactcaagaaggctcggttacaagagtttttaactggatttaag
attattacacaaaaggtaaaggagatgtaccgaacgatcacactaggaggtgacgctgat
ctcgagcttgtagactctttggaccctttttcagagggcatcgcgttcagtgtacggccg
ccgcgaaaaacgtggaaaaacatttcgaatctttctggtggcgagaaaaccttatcgtca
ttatcgctcgtgttcgctcttcactactacaagccggcgccgttctacgtaatggatgaa
atcgacgcggctcttgatcacaaaaacgtttccatcattgccaactatatcaacgaacgc
acacgaaacacgcagtttatcattatcagccttcgcgaagaaatgttttccttggcacgg
aagttaactggcatctataagccttataatgacacgaacacgttgacgctcgacatagaa
cactgccttatcgggatggcgtctgaacgagataaggagaatgacccaccagccgttaca
gcagtcgatacataa
DBGET
integrated database retrieval system
