Varroa jacobsoni: 111262952
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Entry
111262952 CDS
T07417
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
vja
Varroa jacobsoni
Pathway
vja04140
Autophagy - animal
vja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111262952
04148 Efferocytosis
111262952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vja04131
]
111262952
Membrane trafficking [BR:
vja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111262952
Hops complex
111262952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40
Motif
Other DBs
NCBI-GeneID:
111262952
NCBI-ProteinID:
XP_022693327
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MPEDGLSASVRSDWKPLGTDVNFRKFEIYEMQWHTQVHLQDFIVAAAPFGGAIALLRTDR
RCRPGGEQIQVHSAAGQSIKKIRWEGKSISALGWSCSEELIVVGSDGSVHVFPFDPHVIR
VKYSFTLGKEAKDAGVIDTRVFNTRHNQSTGVVVLTGSYRFILVKSLHDPRTNELPDIGL
SSMPSCWQVVSIADSLKVLVAKDNLIYVINANDRSIRQFTGLFDSKITAITEMALSFNHK
LLALFSDTGAIWIGTSDLIKGNEHNTKTRSRPRQFVWCGKDGVVATWANSMVLVGFEQQD
IRYTLEGDDTTHIVAEPDGCRVITNIKHYFLQKVPIEVDDLFNIGSFAPGRLLLEAADLY
RKGSHLADQYLTLIKEDDGQLEQAVDQCIRATGHQWDEESQKALLKAASFGKVFQPIEGK
NRDQYVNMCKHVRVLNAIRSPQIGMPLSFRQFEALGESVVIDRLIVRQHWPMAQAISSYL
KLNMENKILVHWACYKVEQKHLNTNEVATAIGTRLSTVRAMQYSEIANRAADEGRKDLAV
RLLDFEPRAAEQVPLLLKLNQPEDALSKAVDSGDADLVYQAIFYMKEHASAGFNLKLRQF
PVAMNLYQKLCRENDREKLEDLIDQEDDHAAMAKIKIEDAMNASRKEQKIAAMQLAAEHL
RRTPDEFGAHQLELHIKLLRSQMKFEQKLPSLKLFDLHVNDTLMELLKVSELRAAEEIKK
EFAVSDRRWMWLRAKVLAKQGQWDELEKLSKQKRVPLIGFQGFAELCLTYQNKMEALKYI
LKLKEDPKVNYVLRYTDGDIKKAAALAHEQKDVECLQLLREKAIEKAKTAYLANEIDEYI
LRLKNKK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagatggactatctgcgtcagttcgttcagactggaaaccactgggtaccgac
gttaattttcgcaaattcgagatttatgaaatgcaatggcacacacaagtgcatcttcag
gatttcatagttgccgctgccccatttggtggggccattgcactactgcgaacagaccgg
agatgtcgacctggtggcgaacaaattcaggtgcactccgctgctggtcagtcaatcaaa
aaaatcagatgggaaggtaaaagcatttctgcgcttggttggtcctgcagcgaggagttg
atcgttgtaggatccgatgggtcagtgcacgtcttcccgtttgatccgcatgttatacgc
gttaagtactcgttcacactaggcaaagaagctaaagacgccggcgtcatcgatacaagg
gtgttcaacactcgacataatcagagcacgggagtagtggtactgactgggtcctacaga
tttattctcgtcaaatccctgcatgatcctcggacgaacgaattaccagatatcggtctg
tcatcaatgccatcttgttggcaggtcgtgtctatagctgactcgttaaaggttctcgtt
gccaaagacaaccttatctatgtcataaatgccaatgataggtctatcagacaatttacg
ggtttattcgattctaagataacggctattaccgaaatggctttgtctttcaaccataag
ctgcttgcgttattctctgacacgggcgctatttggataggcacttccgatctgattaag
ggtaatgaacataacacaaagactcggtcccgtcctcgccagtttgtatggtgcggcaaa
gacggtgtggtggcaacgtgggcgaattcgatggtgctagtcggcttcgagcagcaggat
atccgttatacgctagaaggtgatgatacaactcacattgtcgcggaacccgatggatgt
cgagtcatcaccaacataaagcactacttcttgcagaaggtaccgatcgaagttgatgat
ttgtttaacataggctcatttgcacccggtcgactgttactcgaagcggccgacctatat
cggaaaggatctcatttggctgaccaatatctcacgttaatcaaagaagatgacggtcag
cttgaacaagccgtcgatcaatgtattcgtgcaacgggtcatcaatgggatgaggaaagt
caaaaggctcttttgaaagcagcttcctttgggaaagtcttccagcctattgaaggcaaa
aatcgtgatcaatacgtaaatatgtgcaaacatgtacgtgttctcaatgctattcgcagc
cctcagatcggaatgccactttcattcagacaatttgaggcgcttggtgaaagtgtggtc
atcgatcgtttgatcgtgcgtcagcattggccaatggcgcaggcgatttcctcttatctt
aaactcaacatggaaaacaagatattggtacactgggcctgctataaggtggaacagaag
cacctcaataccaacgaagttgctacggcaatcggtacccgtctttcaaccgtgagagct
atgcagtactcggagatagcaaatcgtgccgctgacgaagggcgtaaggacctggcagtt
cgtcttctagattttgaaccacgagcagctgaacaggtcccgttactcctcaagcttaat
caaccagaagacgcactgtctaaggcagtggacagcggtgatgctgatctagtctaccaa
gctattttttatatgaaggaacacgcgtctgctgggtttaatctgaagttacgccaattt
cccgtcgcaatgaacttgtatcaaaagttatgtcgcgagaacgaccgcgaaaagttagag
gatcttatcgatcaggaagatgatcatgctgctatggctaaaatcaagattgaagatgca
atgaatgcgtctcgcaaggaacaaaaaattgcagccatgcaattggctgcagaacacctt
cgtcgcacgccggatgagtttggtgcacaccaattagagctgcacataaagctactccgt
agccaaatgaaatttgaacaaaaattgccatcgttgaagctcttcgatcttcatgtcaat
gatacactcatggagctactcaaggttagtgaactgcgcgcggcagaagagatcaaaaag
gaatttgccgtttccgatcgccgttggatgtggcttcgcgcaaaagttttggccaagcaa
ggacagtgggatgaactcgaaaagctgtcaaagcagaagcgagtcccgcttatcggattt
caaggattcgctgaattgtgtttaacttaccaaaacaagatggaagctctgaagtacatc
ctcaagctgaaggaggacccgaaagtaaactatgtactccggtataccgatggggatatc
aaaaaagccgcagctctcgcccacgaacagaaagacgtggaatgcctgcaactacttcga
gagaaagctatcgagaaggcgaaaactgcttaccttgctaacgagattgatgaatatatt
ctacgattaaaaaacaagaaatga
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