Varroa jacobsoni: 111263138
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Entry
111263138 CDS
T07417
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
vja
Varroa jacobsoni
Pathway
vja04137
Mitophagy - animal
vja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111263138
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111263138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111263138
Enzymes [BR:
vja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
111263138
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111263138
Multi subunit type E3
ERAD complex
111263138
LMBR1L-GP78-UBAC2 complex
111263138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_5
zf-RING_16
U-box
zf-RING-like
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
111263138
NCBI-ProteinID:
XP_022693722
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSETRISSFSRLAVTQFPARTVVNMAYCILGLLGKFIHLVVFGQLRISEEQHLKDKFWNF
VFYKFIFIFGVLNVQHVEQVIAWVVWFSLLGFLHLMTTLSKDRFQYLSFSPSVPVGAHVR
LVGLLSCIQAVCALCFGVCMLCGIRYGVHTFALMLAEVALVALNAGYVLARYVYVPHASA
GAGAIPHEVESGKGDKAGVAGGAGFGACPVYYTELVFELATLAVDFLHHLHMLVWTNTML
SMASLVISMQLRWAFNEIRRRVLKHRNYLRVLRHMMVSYPMAAASELRAAADNCAICWEL
MLSARRLPCGHLFHNACLRSWLEQDTSCPTCRLTLQSSDSPSSSAFSDRSSLFGALTLSS
LRVEAEASLRPTMPLPARSHTQHLSVADSATVGSSQHFRESDVVESRTTTVEPQQQQAAT
TNHHLFTFDGSRYFSWLPSVSLEVSHSNLLRPAPQASTSPVDTVGMARHVSSISVGSSRE
MASTTSVVAEVAEGVREYPFSSPTRRSSRSATGQQQKRRHPLELSVGQPLRSPQRTQRIQ
RTLLRPQQQHLPQTPQKFQQRPIPLHRLVPILHANSEGDMTANQGFKMSSGVGTQRGDLD
RPRPLPFDCKQLWTCLESSSYQPTLSPGGQVAGQNQETRGLLVPMDEDKVQPIMGQRAEG
MRESLVTASAAIRYRRVHQRKLDLVEASRRKFLERVEKQQS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagacacggatttcatccttctctaggctcgctgtgacgcaattcccagctagg
acggtagttaacatggcgtactgcatattaggattgctggggaagtttattcatttagtg
gtatttggccagctacggatctccgaggagcagcatctgaaagacaagttttggaatttt
gtcttttacaaattcatctttatcttcggggtcctgaacgtgcagcacgtcgaacaggtt
atcgcgtgggtggtgtggttctctttactgggatttctgcatctcatgacaacgctaagc
aaggaccgctttcaatatttatctttttcgccgtcagttcctgttggggcgcacgtccgc
ctcgtcgggctacttagctgtatacaggcggtatgcgcgttatgctttggcgtgtgcatg
ttgtgcggaattcgctacggagttcacacgttcgcattgatgctagccgaggtggcgctt
gtggctttaaacgctggttacgttttggcgcgatacgtttacgtacctcacgcgtcagca
ggggctggagcaatacctcacgaagtggaaagcggcaaaggtgataaggctggcgttgca
ggtggagctggttttggtgcatgccccgtttactatacggaactcgtcttcgaattagcc
acacttgctgtcgactttcttcaccatttgcatatgctggtgtggaccaatacaatgttg
tcaatggctagtttagtgatctcaatgcagcttcgttgggcattcaacgaaatccgacgg
cgggtcctgaagcaccgaaactacctgcgagtccttcgtcacatgatggtcagctatcct
atggcggcagcgtcggaactccgcgcagctgccgacaattgcgccatctgttgggagtta
atgctttcagcacggagacttccctgcggtcatctgttccacaatgcgtgccttcgttcg
tggctggagcaggacacatcgtgtccgacgtgccgtctgactctacagtcatctgatagt
ccctcgtcatcggctttctctgaccggagttcactatttggtgctcttacgctgagttcg
ctgagggtcgaagctgaagcctcgctgaggcctacaatgccgttaccagccagaagccat
acgcagcatctttccgttgccgacagtgcgacagtaggctcgtcccaacattttcgagaa
tcagatgttgtggagtctcgaacgacaaccgtagaacctcagcagcagcaggccgccacg
actaatcatcatctgttcacgtttgatggctctcgttacttcagttggctgccgtccgta
tcgcttgaagtgtctcattcaaacctacttcgaccagcacctcaggcttcaacttcgcca
gttgacacggtcggaatggcgcgccatgtcagctcgatatcggttggttcgtcacgggag
atggcatcgaccacttcagtcgttgctgaagtggctgaaggtgttcgtgagtatccgttt
tcgagcccaacacggcgctcttcccgatcagccactggtcaacagcaaaagcgccgccat
ccactggaactcagtgtgggccaaccattgcgttcccctcagcggacgcagagaattcag
cgaactctgctgcgaccgcagcagcagcacctgccacaaacaccgcagaagttccagcaa
cgtccgatacccctccatcggctcgttccaattcttcatgccaacagtgaaggagacatg
acagcgaatcagggctttaaaatgtcgtcgggcgttgggacccaacgcggcgatctcgac
cgaccccggcctctgccgttcgactgcaaacaactctggacctgtctcgagtcttcttca
tatcagcccacattaagcccaggcggccaggtcgcaggtcaaaatcaagagacgcgtgga
ctgcttgtacctatggacgaagacaaagtgcagccgattatgggtcagcgggccgaggga
atgcgcgagtcattagtgactgccagtgccgccattagatatcgtcgtgtgcaccagaga
aaactggatctcgtcgaagcgtcgcgcaggaaatttctcgagcgtgttgagaaacaacag
tcttga
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integrated database retrieval system
