Varroa jacobsoni: 111263193
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Entry
111263193 CDS
T07417
Name
(RefSeq) Niemann-Pick C1 protein-like
KO
K12385
Niemann-Pick C1 protein
Organism
vja
Varroa jacobsoni
Pathway
vja03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
vja04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111263193
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111263193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vja02000
]
111263193
Transporters [BR:
vja02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
111263193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
Sterol-sensing
NPC1_N
Patched
MMPL
Hum_adeno_E3A
Motif
Other DBs
NCBI-GeneID:
111263193
NCBI-ProteinID:
XP_022693823
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MTNGKNTVGTMRRWISLCLIMELAVSTNAECVFKGQCDIYLTVKPCVSEGDDTKPEPLNS
TRLFNELRKFCSDFVDPEEPLCCDSVSAQNIINQMKTLDAVVGHCPSCYVNIARIFCQST
CSPNQHEFLNVTSWTPVNKTRYGNKAVLGLTYYISEDYINSAYASCSTVTNPQTGSALTL
LCGNFGALYCTPTNLLKFMGSSPFPSPFQINFSYTALDPFIPLNANATPCNKSPFNGSSP
CQCVDCSSTCPPFPLPPQECDLSIFGIDVWFFTLSLFFSVLVIAYISTLCVYRRRRSLLT
ALTTATSEYDEIVSEMNDGEKADRPCVVMSAFERLGYVCASRPWLVILLGLACVILFSMG
NLRFEVVTDPVELWSVSTSLAHTQRDYYNKHLGPFYRIEQVIVRNKYGKSFNYTDTERNL
EHEFGPVFERKFFLDVLHLQQEIMALKATFKDNKTVVLDDICFKPLGGNHKCAIQSAANW
FQNQATHIINGTKYLEHIIDCVSSATITRDFDNVLKIGCLGDFGGPSYSYVALGGYNGTD
ALKARSLILTFLVNNHVNDSDNAQAIAWEREFVKFMKRYNHSHMDISFLSESSINDELTR
ASVSDVWTIVISYLFMFAYVSFALGRYRTWSTALLDSQITLGIMGILLVFVSVAASIGIF
SFFGVSSTLIIFEVIPFLVLAIGVDNIFILVQTHQRTTRLDGESVEQHMARVLGIVGPSM
LLASASECTCFFLGALTDMPAVKKFALYAGLALLIDFLLQITVFVAFFTLDVRRQEARRL
DLFCCVTSKKTSEDNTREQFEDSWLYSFMKCKYAPLLKGSKYRNGVFVAFIAWFFLSIAV
IHKLDIGLDQEISIPEDSYLQQYFLSLKISLNIGPPLYLVVKDKYDYNEPTNQNIIGSFP
GSSGYSLVNQVKQAYLNASITYVAAPAMSWIDDYFGWITSCCKNCNGNNSFTKHINDFLS
ENPDGSCARAGHAAYSTAVELKNTTDGFEILATSFMTYHSVLKTSTDYIAALRMSRYLTD
RIQEKVRDSYVGNKNDVEVFPYSVFYVFYEQYLTIWRDTAIHLLLSFLGVLTITLLLTRF
RLLPTLAICVTILMIVLDVMGIMYFAGIALNAISMVNLVMCVGISVEFCSHVTKAFYSRS
EELPVDRAVGALTEVGSSVLSGITMTKFAGVLVLAFAKSQLFVVFYFRMYLSIVLVGSAH
GLIFLPVVLAMFGPTLKPV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatggaaaaaacacggtcggcactatgcggcgatggatttcattatgtctcata
atggagctcgctgtttcgaccaatgccgagtgtgtattcaagggacaatgtgacatatac
cttactgtcaagccctgcgtttccgagggtgacgacacaaagccggagccgctaaactca
accagactattcaatgaattgcggaagttttgttcggacttcgttgatcctgaagaacct
ttgtgctgtgactctgtatcagcccagaatataatcaatcagatgaaaacactggatgcc
gtcgtcgggcattgtccgtcctgctatgtaaatatagcaagaatcttctgtcaaagcaca
tgctcgccaaatcagcatgagtttctgaatgtaaccagctggacccctgtcaacaaaacg
cggtatggcaataaagcggtgttgggtctcacctactacatatcagaggattacataaac
agtgcatacgcatcttgctcgactgtaactaatccacagactggatcagcattaacactg
ctatgtggtaactttggcgcactgtactgcacaccgaccaacctcttgaagttcatgggc
agctcgcctttcccgtctccattccagatcaactttagttacacagctctggatccgttc
attcccttaaatgcaaatgcaacaccatgcaataaaagtccgtttaacggatcaagtccc
tgtcaatgcgtcgactgtagttctacatgtccaccgttcccacttccccctcaagagtgt
gacctttcgattttcggcatcgatgtatggttctttacattgagcctgtttttcagtgta
ttagttatcgcttatatctcaaccctttgtgtttatcgtaggcgacgatcactgttgacc
gcgttaaccactgctacctctgagtatgatgaaatcgtctcggaaatgaatgacggcgaa
aaagccgatagaccctgtgttgtgatgagtgcgtttgagcgactaggatacgtatgcgct
agtcgaccgtggctcgtgattttgttgggtttagcttgcgtcattctattttccatgggt
aatttgcgtttcgaagtggtcacagatccagttgaattgtggtcagtttcaacctctctc
gcgcacacgcaaagggactattataataagcatctaggcccattctatcgaatcgagcaa
gtgatcgttcgaaacaaatatggaaaatcatttaactatactgatacagaaaggaattta
gagcatgaatttggtccggtcttcgagagaaaattctttctcgatgtacttcatcttcag
caagagattatggcgctgaaagcgacttttaaagacaataagaccgtagtcctagatgat
atctgctttaaaccgttaggggggaaccataagtgtgccatccagtcagcagctaattgg
ttccagaatcaagctacgcatattataaatggaacaaaatacctggagcatattattgac
tgtgtgagcagtgcaaccattacgcgagatttcgataacgtacttaaaatcggttgtctg
ggcgattttgggggtccaagctacagttatgtagcactgggaggttacaacggtacggac
gcactgaaggcccgttcgttgatactcaccttcctggttaacaaccatgtcaatgattca
gacaacgcgcaagcaatcgcatgggaacgcgaattcgttaaattcatgaagcgttataac
cattctcacatggacatttcgttcttatcagaaagctcgatcaacgacgaactcacacga
gcaagtgtttccgatgtctggactatcgtgatcagctacctttttatgttcgcctacgta
tcgtttgcgcttggtcgctaccgaacctggtcgacggctcttctagacagccagataacg
cttggaatcatgggcatattgctagttttcgtctcggtagctgccagtattggtatcttc
agctttttcggcgtttcctcgacgttgattatattcgaagttattccgttcttggtgctg
gccattggagtggataacatcttcattttggtacaaacgcatcagcgcacaacgcgcctc
gatggcgaaagtgtcgagcaacacatggctcgtgtccttggtatagtaggaccttcgatg
ctattagccagtgcaagcgaatgcacttgcttcttccttggtgcccttacagacatgcct
gcagtgaagaagtttgcactttatgccggtctggcattgctcatcgactttctattacag
attaccgtattcgtggcattttttacgcttgatgtgcgtcgtcaagaagctcgtcgtctc
gatctgttctgctgcgttacatcaaagaagacgtccgaggataacactagagaacaattc
gaggactcttggttatacagctttatgaaatgcaaatacgcacctctacttaaaggctcc
aagtatagaaatggcgtctttgtagcctttatcgcatggttcttcctgtcaattgctgtt
atccataagctggatatcggtcttgatcaggaaatttcaataccagaagattcctatctg
caacagtactttctatcgctcaaaatttctctgaatattggtcctccactgtatctggtc
gttaaggataagtatgattataacgaaccaacaaaccagaacataattggttcgttccca
ggctccagtggatactctctcgttaaccaggtcaaacaagcatatctgaatgcaagtatt
acgtacgtcgccgcgcctgcaatgtcatggatagatgactattttggttggattacatca
tgctgcaaaaactgtaatgggaataatagcttcacgaagcacataaacgattttctttct
gagaatcccgacgggtcatgtgccagagcgggccatgccgcatatagtaccgcggtagag
ttgaagaacacaaccgatggttttgagatcctcgccactagtttcatgacgtatcattcg
gtgttgaagacaagcacggattacattgctgctctgagaatgagccgttacttaaccgac
cgaattcaggaaaaggttcgcgacagctacgttgggaacaagaatgacgtcgaagtgttt
ccttattccgtcttctatgtattctacgagcagtatctaaccatttggagagatacagct
atccatttgttgctgtcgtttttgggtgtcttgactattacgctactgcttacgcggttc
cgtcttttgccaacactagccatttgcgtgaccatcctgatgatcgtcctcgatgttatg
ggtatcatgtacttcgctggaattgcgctaaatgctatctcaatggtaaatctcgtaatg
tgcgttgggatttcggtcgaattctgttcgcatgtaactaaggcattttatagtcgaagc
gaagagttgcctgtagacagggccgttggagccctcaccgaggtgggcagctcggtgctg
agcggtattacgatgaccaaatttgccggagtgttggtacttgccttcgccaagagtcag
ctatttgtagtattttattttcgcatgtatcttagcattgtattggtagggtcggctcat
gggctaatcttcctgcccgtcgtgctggctatgttcggtccgacactgaaacctgtttag
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integrated database retrieval system
