Varroa jacobsoni: 111263210
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Entry
111263210 CDS
T07417
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
vja
Varroa jacobsoni
Pathway
vja03030
DNA replication
vja03420
Nucleotide excision repair
vja03430
Mismatch repair
vja03440
Homologous recombination
vja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111263210
03420 Nucleotide excision repair
111263210
03430 Mismatch repair
111263210
03440 Homologous recombination
111263210
03460 Fanconi anemia pathway
111263210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vja03000
]
111263210
03032 DNA replication proteins [BR:
vja03032
]
111263210
03400 DNA repair and recombination proteins [BR:
vja03400
]
111263210
Transcription factors [BR:
vja03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111263210
DNA replication proteins [BR:
vja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111263210
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111263210
MMR (mismatch excision repair)
111263210
DSBR (double strand breaks repair)
HR (homologous recombination)
111263210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
DUF223
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
111263210
NCBI-ProteinID:
XP_022693846
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MANDFASMITYGALKQMRNENDGLKPIVQVMELKPVKENRLRAYLWDGVEDFNYGMISSQ
AVPHVEDKLKPFCLIRVNNYSVTNTNNRSIIIIMSCDVVAEAADVKAKVIFTENQRKAFT
EKGNISQEVGNSVSNIKTPTKPNRPLGMTNGTPRTPFSTATMPISSLNPYQSRVTIRGRV
SSKSDIKTWSKASGQGKLFTFEVFDDSGEIRVTAFNEQADKFFELIQPKQVYFISGFQCK
AVNKTFRVNNNEYELTLGKFANVVLCTEDCGDVPEQTYVFVKIAEIEDSPTDQLVDVCAV
VKSFGEPQTFNRRTDGRPITKREVMIVDDSNKSIALTLWNDSAVNFQAENNPVILVTKAR
ITEFNGSVSITTGQTSSLELNPNLDRSKELQLWWRAEGCKSDFESIRGSGAGFDYAQEWM
DFELMTRKGEAFDISDKPMYVWNRATITMFNKDNALYKACAADNCMKKVQDQGDGLYLCE
KCGGQPSRNFKWRMLLKIVVSDATRQSWATAFNEKAEQILGVTAATLGKYNEDDPEGMDK
IFADAMFKGFHMKFRGKMEVFQEERRFQLAVVDAKEVRVVDDCKHLIKEIESLGKLLD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgattttgcgtctatgattacctatggcgcgctgaagcaaatgcgaaacgag
aacgacggtttgaaaccgatagtacaggttatggaactaaaaccagtaaaggaaaataga
ttgcgtgcatacctgtgggacggtgttgaagacttcaactatggtatgatctcatcacaa
gccgttccgcatgtggaggataagctaaaaccattttgcctcattcgcgtaaacaactac
agcgtcacgaacacaaataacaggtcaattataatcattatgagctgtgacgttgtggca
gaagctgctgacgtcaaggcaaaggtgatcttcacggaaaatcaacgtaaagcttttaca
gagaagggaaacattagccaggaagttggaaacagcgtatcaaatataaagacaccgaca
aagccaaaccggccactcggcatgaccaacggaaccccgcgcacgcccttcagtactgct
acaatgccgatttcgtccctcaatccgtaccagagccgcgtcactatccgcggtcgcgtg
tcaagtaagagcgatatcaaaacctggtcgaaagcatccggccaggggaaactgtttaca
tttgaagtcttcgatgattccggtgaaatacgagtgacggcgtttaacgagcaagcggac
aaattcttcgagttgatacaaccaaagcaggtgtacttcatttctggttttcaatgcaag
gctgtcaacaaaactttccgcgtgaataacaatgagtatgagctcaccctagggaaattc
gccaacgttgtactatgcacagaagattgcggtgacgtacccgagcaaacgtacgttttc
gtgaagattgctgaaatcgaagactcaccgacagatcagttagttgatgtttgcgcagtt
gtgaagagcttcggagagccacagacgttcaacaggcgaacagatggaaggcccataacg
aagcgggaagtgatgattgtagacgattcgaataagtccattgctctgactttatggaat
gattcggctgtcaacttccaagctgaaaataacccagtgatcctggtaacgaaggctcga
atcaccgaatttaacggttcggtgtcaattacaactgggcagacttcatcgctagaattg
aacccgaacctggaccgttccaaagaactacaattgtggtggcgcgccgaaggctgcaag
agcgacttcgaatctattcgtggctcgggtgccggcttcgactatgcacaggaatggatg
gactttgagctgatgacccgtaagggtgaagctttcgatatctctgacaagcctatgtac
gtgtggaatcgtgccaccatcacaatgttcaataaagataacgctttgtacaaggcttgt
gcagctgataattgcatgaaaaaggtgcaggatcaaggcgacgggctgtacctgtgcgaa
aagtgcggaggtcagcccagccgaaacttcaaatggagaatgttgcttaagatcgtagtg
tcagatgctaccaggcagtcgtgggctacggcgttcaatgaaaaggctgagcagatactc
ggcgtgacggctgctactcttggcaagtacaatgaggatgatccggaaggtatggacaaa
atttttgctgacgctatgttcaagggattccatatgaagttccgtggcaagatggaggtg
tttcaggaggagcgtcgattccagttagctgtcgttgatgccaaagaagtgagggtggtg
gacgactgtaaacatcttatcaaggagattgaatccttaggaaagttgttagattag
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