Varroa jacobsoni: 111263341
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Entry
111263341 CDS
T07417
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
vja03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111263341
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111263341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111263341
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111263341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
111263341
NCBI-ProteinID:
XP_022694055
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MAEKRSSLGSRADSINSSSQPRGGKRRRTMLDSVAEVAKWLLPSWASEHEAIGQMSAGYR
VPLSDDQPSGSGASTGSHGRHYSNLRNGGERSSKLARFNNDIAPHSATRRGVIVTRLSSV
TLVSPPTTSTDDACDLDDGSDSSTSGCSSLSLAGTNPPTSAEASTPDGVDHRSNDQQRVP
NRPNPGRSATLRPPLQTAAAPSTDNSKTRDVSIGAEQIAITAETSAADPSSLNFSLFSRP
SRALSSTLNTTLPLAGKHNRLLSSSLQKPERSLNRSIFYDGKTTYGGAAAHRKLNLFSPS
PYQMSATRSKAPSNVRVQGQNSSAKRLIQALERINTPVQNAKRIPMGRPDSVASQDSELR
RKEALESIASLRQNMPPTLSTCRTPVENAKIGSNVTSAAQHDYTIDVDSDKIPVPPIASS
FPLVTSTPSSHHRVSKVIDVPGTDKGGGKIKPTKSIHSNRKGLIPEEEPAPEDPDLVSVP
LPIKTLPHFSFSTKPSVVVAAGTEPVSKAGSVRSPLTSLADFSNKPFEKSSVPPVCPGAD
SPEVFTFAGPVSLAKPTEVSSSKEEEFKFKHPLYLNKGGSIDNTLNKTPSFTIAAPTMIV
GNPGSLKVKEIGKTPSPSAELATSGSVLDALSSEKKDKMPSEASDWGSQFRKSPSQWDCP
TCFVTNGPNDDKCKACETKNPAITSAAVAQSSASSAAPPNQWGDLFKKVPGSWTCNDCMV
SNDSESTSCVACSKPKPVVKLSSGPMPTSSVKPALPFGGVFVMQSGWQCSKCPQRNDIKS
VKCAFCEAPKPGQVASSTTAASITTSAFKFGVPSATPNTNATNSNNIPFGQTNTAEKKTE
GALAAATLAFKEPSNSAPNEKKGEKKSDDTKEENDNRPTFSTSTKDAAPAIKSGVNDKAP
INTAAIMGFGNAFKFGTPNALASKSEEEKSSDNTKAAVPTAGVGGLFTFGVSPTTSASPV
TTTTFATSTPVFAFGTSVASSTPATTASSATFSFGSPAVPATITTDTTAPTSTTVTSGTP
TSVTVPSASDNNIVKSQTPVAFTACDVSTISATLFGSSSLTTTQATTTATLFGASPSSVA
TATTTESLTAPISSAFSFTPLNTAAVPTAATQRPPSCSPHETTSQASKPLFSFDTSQSAP
LSATPALSTALSTEPTTSKAPSVPASSPFVFGVSNTSSSTPAASSTISASAGYNFEAAAN
ASTPPMFTFGQRAAASSASATPLTSAPGGFGAPAASTATPPASTFGALAASAPTQSATPV
FGGGTASSGSVFQFGASAPSTPAVTAAPTPTPSGVPSFVFGQPSTGSQSAANTVAGGPAT
MFAFGANSAAASTIPGGTNNTNTNTNNGTAPPASATPFGFCATPTMSNLNSSTGGEMFKF
TSPAAAPAATTTFQFGAQPPAGLAGTAAPFQFGATTGTPAAPGIPSFIGQSADNPFNGPV
ISGRKVKRAIRRKPGNSR
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaacgttcttcgcttggctcgcgggccgacagcatcaacagttcaagccaa
ccgcgaggtggcaagcggcgacgaacgatgctggactctgtggcagaagttgccaagtgg
ttactaccatcgtgggcaagtgaacacgaggctattggacagatgtctgccggataccgg
gtgccactgagcgacgaccagccttcaggctctggagcttctaccggatcacatgggcga
cattacagcaaccttagaaacggcggtgagcgtagttccaagctcgctcgctttaataac
gacatagcacctcactcggcaacgagacgtggggtcattgttacgcgcctttcttctgtc
acactagtatctcccccaaccacgtcaaccgatgatgcttgtgaccttgacgatggatcg
gactcatcaacatcaggctgttcctccctttctcttgcgggaacgaatcctccaacatca
gcggaggcaagcactcccgacggagtcgatcatcgatcgaacgaccaacagcgagtgccc
aatcggccaaatcccggtcgctctgcaactttaagacctccactacaaacagcagcggcc
cccagtacagacaatagcaaaaccagagatgtcagtatcggtgcagaacagattgccatc
accgcggaaacctcagcagccgatccgtcatcgttaaatttttcgcttttctctcggcca
tctcgagcgctctcatccacgctaaataccacacttccattggcaggaaagcataataga
ctcctgtcgtcgtcgcttcagaagcctgaacgaagtctaaaccgtagcattttctatgac
gggaagacaacttatggcggagcagcggcacacagaaagcttaatttgttttcccctagt
ccgtatcaaatgtcagcgacacgctctaaggccccttcaaatgtgcgtgttcaaggacag
aactcgtcggcgaaaaggctaattcaagctttggagaggataaacacgcctgtacagaat
gcgaaaagaattcctatgggtaggccagacagcgtcgcttctcaagattcagaactcagg
cgcaaagaggcgctagaatcaattgcatcacttcgccaaaatatgccaccaacattgagc
acatgtcgtacgccagttgagaacgccaagatcggtagtaatgtgacgtcagctgcccag
cacgattacaccatcgatgtcgattcagacaaaataccagttccaccgatagcgtctagt
tttcctcttgtcacttcaactccgtcgagccatcatcgggtctcaaaagttatcgatgtt
cctggtacagataaaggcggtgggaagataaaaccgacgaaatcgattcattctaatcgg
aaaggcttgattcccgaggaggaaccagctcccgaggatcctgatctagtttccgtacct
cttcccattaaaacattacctcactttagtttttcaactaaaccttcggttgtggttgct
gcagggacagaaccggtatcgaaggctggatctgtacgttcgccgttaacctcgctggcg
gacttcagtaacaagccctttgaaaaatcgtccgtgccgcctgtgtgtcctggcgcagat
tctcctgaagtgtttactttcgctgggccggtaagtcttgcaaagcccactgaggtgtct
tcgtccaaagaggaggagtttaaatttaaacatcctctttatctgaataagggcggtagt
attgataataccctaaacaaaacaccttcatttacgatcgcagcacccactatgattgta
ggcaatcctggtagtctcaaagtaaaagagattggtaagaccccctcgccatcggccgaa
ctcgctacatcgggaagtgtgcttgacgctctaagctcggagaaaaaagataaaatgccg
agtgaagcctcagactggggaagtcagtttcggaagtcccccagccagtgggactgtcca
acgtgtttcgttacaaacgggcccaacgatgacaaatgcaaagcatgtgaaacaaaaaat
ccagcgataacttctgcggctgtcgcacaaagctctgcatcaagcgctgctccaccaaat
caatggggggacttatttaagaaagtacctggctcatggacatgcaatgattgtatggtt
agcaatgattccgagtcgactagttgcgtggcatgttcgaagccgaaaccagttgtgaag
ctaagtagtggacccatgccaacttccagcgtaaaacccgcattgccatttggcggtgtt
ttcgtgatgcagtctgggtggcaatgcagtaagtgcccccaaagaaatgatataaagagt
gtgaaatgtgccttttgtgaagcgcctaagccaggtcaagtggcatcttcaactactgct
gcctctatcacgacatcggctttcaagtttggcgtaccttcagcaactcccaatacgaat
gcgactaacagcaacaatattccgtttggacagacgaatactgctgaaaagaaaacagaa
ggcgcactagccgcggccacattggcatttaaagaaccctcgaattctgctccgaacgag
aaaaaaggtgaaaaaaaaagtgacgataccaaggaggagaatgataacaggccaaccttt
tcgacatcgaccaaagatgctgcgccagcaataaaatctggtgtgaacgataaagctccc
ataaatacagcagcaattatgggattcggaaacgcgtttaagtttggcacacctaacgcg
ctggcatcaaaatccgaagaggaaaaaagcagcgataataccaaggctgcagttcccaca
gcaggagtgggggggctttttacatttggggtatcgccgacgacgtcggcttcgccagtt
acaaccaccacatttgcgacttcaactcctgtgttcgctttcggaacttcggttgcctct
tccactccagccaccacagcttcttctgcgacgttctcgtttggttcgccagctgtaccc
gctactataacaaccgatacaacggcaccaacatcgacaaccgttacgtctggaacacca
acttctgttactgtgcctagcgccagcgataataatatagttaaatcgcagacaccagtt
gcttttactgcttgtgacgtatccactatcagtgccactttattcggatccagtagtttg
accaccacacaagccacaacgaccgcgacattgttcggtgcatctccctcttccgtagcg
acggctactacaacggagagtttaacggcaccgatttcctcggccttttcatttacgccg
ttaaacacagcagctgtgcccacagctgcaacacaacgaccgccctcgtgttctccgcac
gagactacttctcaggcatcaaaaccacttttcagtttcgatacctcgcaatctgcacct
ctgtcagcgactcctgctttaagtacagcactttcgaccgaacccacgacttcgaaggca
ccctctgttcccgcgtcgtcgccatttgtatttggggtatcgaacacgagctcctcgacg
ccagcggcttcctccactatttcggcatcagctgggtacaacttcgaggcagcggctaat
gcttcaactccgccaatgttcacattcggacaaagggcagctgcgtcatctgcaagcgcc
acaccattgacttcagcacctggaggttttggagcaccagctgcatccacagcgacgccg
ccagctagcactttcggagcacttgccgcttcagccccaacgcagtcggcaacacctgtt
tttggaggtggaaccgcttcatctggttcagtgtttcagtttggagcatctgcaccctct
actccagcggtaaccgctgcaccaacccccacacctagtggggtgccatccttcgtcttt
ggccagccttctacagggtctcaatccgccgccaatacggtagcaggtgggcctgcaaca
atgtttgctttcggagctaattcggcagcggcatctacaatcccaggcggaaccaacaac
actaatactaacaccaacaacgggacggctccgcctgcctctgccacccctttcgggttt
tgtgccactccaacgatgagcaatcttaattcttcaacgggcggtgaaatgttcaaattt
acgagccccgcggcagcgcccgccgcgacaacgaccttccagtttggggctcagccacca
gctggactagctggtactgctgctccgttccagtttggtgcaacaacaggtacaccggcc
gcacctggaattccttcgttcataggtcaatccgctgataacccatttaatggaccagtg
atttcgggtcgtaaagtgaagcgtgcaattcgacggaagccaggcaactcacgatag
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