Varroa jacobsoni: 111263634
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Entry
111263634 CDS
T07417
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like isoform X1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
vja
Varroa jacobsoni
Pathway
vja04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111263634
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vja02000
]
111263634
Transporters [BR:
vja02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111263634
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111263634
NCBI-ProteinID:
XP_022694640
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MKSQDSAGGTRYELAYDGKGELVYDDQEAGPLPAKCVPGDSEEELPVRGNWGGKLDFIFG
CVSYAVGLGNVWRFPYLAYENGGGAFLVPFFISIVLCGIPLFVMEVSIGQYLNTGGIGIW
NLVPMFKGVGYASMTMIGLSNIYYIVLIAYTLYYFVASFSSPLPWENCGNDWNTITCVSL
RENRTSLNRTDGTSSVREYWDIKVLGITSGLHEMGELRSELVVYLLIAWVLVYMVIWKGL
HQSGKIIWCTALFPYLILLILFTRGVTLEGASEGLLFYLKPDWSKLREPKVWIAAGTQVL
FSYGIGIGANVALGSYNKYNHNFYKDSLIVCAICSGTSLFAGLVIFSVLGHMAHVQGKEV
AEVARSGPGLAFLAYPEVVVQLPWASAWAILFFLMLIVLGIDSQFCTVEALVTGLVDEFA
TILRPHRRLFTLGIVCLQFALGLPIVTQGGMYIFQLMDFFSASGVSLCTVVLFEIVGFSY
IYGASRIYENIEDMIGFRPNRFYVFCWLVAAPVVILGMLLFYLIEHEPLTYSDTYVYPWW
GEAIGWCMALASIIWIPLYALYFLCSTPGTFLERIKKGVTPQVVPRKVQEGTPTSEESVT
MDNPITSAQLLLRPEKV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccaggacagtgcgggtggaacccgctacgagctcgcctatgatggcaaagga
gaactcgtgtatgatgatcaggaagctggacccctgcccgccaagtgcgtgcctggcgac
tccgaagaggaattgccggtccgcggcaactgggggggcaaactcgatttcatcttcggt
tgcgtcagctacgctgtcggactcggcaacgtttggcgattcccgtaccttgcctacgag
aatggcggtggtgcatttctggttccattcttcatcagcatcgttttatgtggaattcct
ttgttcgtaatggaagtctccataggacagtaccttaacactggtggaatcggaatctgg
aacctcgtcccgatgtttaaaggtgtgggttatgcgtctatgacaatgattggcctatcg
aatatctactacatcgtgctgatcgcgtacactctttactactttgtggcttcgttttca
tcgcctcttccgtgggagaactgcggcaatgattggaacacgattacctgcgttagcctt
agggaaaaccggacttccctcaatagaaccgacggaacatcgtccgtgagagaatactgg
gacatcaaagtcttaggtattacatccggcctgcacgaaatgggtgaactgcgttcggag
cttgtggtctatttactcatcgcctgggtcctcgtctacatggtcatctggaaaggactt
catcaaagcggcaagatcatctggtgcacagctttgttcccataccttatactgctaatt
cttttcactcgtggtgtcaccctcgaaggtgctagtgagggtctattgttttatctcaag
cctgactggtcaaagctccgagagcctaaagtttggatcgctgctggaacccaggttctc
ttctcctacggaattggtattggcgctaatgtcgctcttggttcgtacaacaagtacaat
cacaacttctacaaggattctctcatcgtgtgtgccatatgctccggtacgtcgctcttt
gctggtctagttatcttctctgtgcttggtcatatggcccatgttcagggcaaggaagtc
gctgaagtggcgcggtccggacccggtcttgctttcttagcttatcccgaagtcgtggtg
cagcttccgtgggcctcagcttgggctattctcttcttcttgatgctgatcgtcctgggt
atcgattcacaattctgcacagttgaggctctggtaacaggtctcgtagacgaattcgcg
accatcctacggccgcaccgccgacttttcactctgggtatcgtttgtcttcaattcgca
ctcggcctaccgattgtcacccagggaggcatgtatatcttccagttaatggattttttc
tcggcatctggcgtatcactgtgcactgtcgtcctgtttgagattgtcggattctcttac
atttatggcgccagccgcatatatgaaaatattgaggacatgatcggcttcaggcccaat
cgcttctacgtattttgctggcttgttgcggcccctgtcgttattctgggaatgctcctt
ttctacctgatcgagcacgagccacttacgtactcggacacgtacgtctatccctggtgg
ggtgaggccattgggtggtgcatggcccttgcgtccatcatttggattcccctatatgcg
ctctatttcctctgcagcacccccggaaccttcctcgagcgcatcaagaagggcgtgaca
ccgcaagtggtgcctcgtaaggtgcaggagggcacaccgacctctgaggagagcgtcact
atggacaacccaattacgtccgcccagctccttcttcgcccggagaaggtgtga
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