Varroa jacobsoni: 111263709
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Entry
111263709 CDS
T07417
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
vja
Varroa jacobsoni
Pathway
vja04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111263709
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vja01009
]
111263709
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vja04131
]
111263709
03029 Mitochondrial biogenesis [BR:
vja03029
]
111263709
Protein phosphatases and associated proteins [BR:
vja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111263709
Membrane trafficking [BR:
vja04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111263709
Mitochondrial biogenesis [BR:
vja03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111263709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
111263709
NCBI-ProteinID:
XP_022694780
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MCLFGGFDYPPMSDFIRMFLYGRSLRSRGSIVEDWEAVTESCLYPLRSAPTHGFKMLYIF
SVEQGTMLTFEMDYACQSVDNLKSAIDLTQNVPKEKQVLLISGGECLNNSRTVASYGAGT
DTNPIFLFNKTLYADLQLPSSPEVGRHQFNNPHYERQEALTLQKLQSHCALEPTMVTIRK
RTQFAQELYELSVQEAKLCRQKVHEQHLQQQAWSAVIANLEDAGVAFEKRSRRFLLLFET
FVARNAEFQMIQDNFPEDCMLLARLPLLTKLTQTSQHQEMNDLNLSSTDGLPATLLDYVI
RSNPENSLEDLAEQCRKGLTQLTPEVLEEMRKMIKEILDKTSQPNFKHIKGLEDRLSGLE
ELMRKADDLVIRQEPNCQSFLLMQANAAKLKDSERSLMIPDLCSTQPEILQKMHLNYTML
KDITRRCSVAKNELSENLKYRLAYITQVEGSIGDISTKLKVYEKRIETFSRILNKMEQIH
SAPQIYARSVAEVVRRKRFSSLYLKWAGGLSAHCKEVYRNELAQRRAYKEQTRSHFLRKL
FPGLDDVPPPYATSTPEIFDDRLPPVELVDVEQLKRAMPADLAGLLESSTSVPSLSLMDI
DNVSHSASDISSKKTVESDAVSHQEVRVYDMVTASSPADPGYVTDNSNNVLMELSVEKVG
TGSEAASAQEQKICVDVLHCEEMREKVRGCVNDLRVTVGAFVDDTTMLAQDLRRWTGELA
EDATKVATTVAAIVQGGQDKEKSLERQLEIELHKLKDAQAEIELYYDQLRQMKELVDHSK
QEIEIQKADYDSRLTKLQMEHELELENVEARYKQELTQLNARITEIQEQNERLIVAQEDH
ATQLANVVIDHEGRLARLHEEFTARELAVREDLERHHKNELESLRCRYKLTTSVMSTSSG
TIGSDVVSSLSSPQGGVTGPLLLPAGISHSQEIENRWRLREMELEERIRQLERMLQDRNN
DSPSPAVVAGVMDTSCTSAMSSLQMMVDSQYRVMAESAVGTLAGPGIGGGTSTAMVESTV
VRLQPSHTNNNNPATAMELIEQLRAKEAEIQRIQMRLVSSCGTGSLPSLSSDRVSILSCV
HGDVVLLAYDDNHENYVIFMLGPLLHFLHRDSLEELRLSTDRERSTKRWIIGEVVDKEYC
EARRAVNRYRLAVGTRFFRVKVRPWDRQGAMRREQERRQVLKAAATATTGAATLSVPLGN
NSENAGANVASAVALATTLSLNAATTTTVTAGVGGPSDGPNLPASAASPVASPATSI
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgttcggcgggtttgattacccgccaatgtctgacttcatacggatgtttctt
tatggacgatcattaagaagcagagggagtatcgtagaggattgggaagcggtaacagag
agttgtctttaccccctgcggagtgcgcctacacacggctttaagatgttatacattttc
agtgtcgaacaaggaaccatgctcacttttgagatggactacgcttgtcagagcgtggac
aacttgaaaagtgccatcgacctgacgcagaacgtacccaaagagaaacaggtcttgctt
atttccggtggcgaatgcctgaacaactcgcgaacggtagcctcgtacggagccggcacc
gatactaacccaatatttttgttcaacaagacgctgtacgcggacctacagttgcccagt
tcaccggaagttggtcgacatcagttcaataaccctcattatgagcgacaagaagcgctt
acattgcagaagttacaatcgcattgtgcgcttgaacccaccatggttacgatcaggaaa
cgaacgcaatttgctcaagaactctatgaactatcagttcaggaggctaagctgtgtcgg
caaaaggtgcacgaacagcatctccagcagcaggcgtggtcagcggtaattgccaacctt
gaggacgcaggcgtagcgttcgaaaagcggtcgcgtagatttttgctccttttcgaaacg
tttgtggcgcgcaatgccgaatttcaaatgattcaagacaatttccccgaggattgtatg
ttactcgccaggctcccgctactgactaagctgacccaaacatcacaacatcaggaaatg
aacgatttgaacctgtcttcgactgacggactgccggccactcttctggactacgttatt
cgatcaaacccagaaaacagtttggaggatttggccgaacagtgtcgtaaagggctgacg
cagttgactccggaggtgcttgaagagatgcggaaaatgatcaaggaaatccttgataag
accagccagccgaatttcaaacatattaagggtctggaagatcgtctgagcggactcgag
gagctgatgcggaaggccgacgacctggtcattaggcaagagccaaattgtcagagtttc
ttgctgatgcaggcaaatgctgccaagctgaaagacagtgagcgttcgctaatgattcct
gatttatgtagcactcaacccgagatcctgcaaaagatgcatctaaattatacgatgctc
aaggacattacgcgtcgttgttcagtggccaagaacgaactgtcagaaaatctaaagtac
cgcttggcatacattacccaggtagaagggagcatcggtgatatatcgactaagcttaaa
gtctacgaaaagcggattgaaaccttctcccggatccttaacaaaatggagcagattcat
agcgcaccgcaaatttatgcaagatctgttgccgaggtggttcggcgaaagcgcttctca
tccctctatctcaagtgggccggagggttatccgcgcattgtaaagaggtctacagaaac
gagctggctcaaaggagggcgtacaaggagcaaacgcggagtcacttcttgcgaaagctc
ttccccggcctcgatgatgttccgcccccgtacgccacgtcgaccccggagattttcgat
gatcgcttaccacctgtcgaactcgttgacgtcgaacagctcaagcgcgccatgccggca
gatcttgccggcttacttgagagcagcacctcggtaccttcgctatcgctgatggacatt
gacaacgtcagccactcggcctcagatatctcgtcgaagaagacagtcgaatcagacgct
gtatcccatcaggaggtacgagtttacgatatggttacggcctcaagccctgctgatccc
ggatacgtcaccgacaacagtaacaatgttctaatggagctcagcgtagaaaaggtgggt
accggcagcgaagctgcctctgctcaagaacagaagatatgcgtcgatgtactgcactgt
gaagagatgcgggaaaaagttcgcggttgcgtgaacgaccttcgtgtcactgttggcgct
ttcgtggatgacacgactatgcttgcgcaggatttacggcgttggacaggagaactggct
gaggatgcaaccaaagtagcgacgaccgttgctgccatagttcagggaggccaagacaaa
gagaaatctcttgagagacagcttgaaattgagcttcacaagcttaaggatgctcaagct
gagatcgaactctactacgatcagctccgccagatgaaggagcttgtggaccactccaaa
caagaaatagagattcagaaagctgattacgactcgcggctaaccaagttgcagatggag
cacgagctcgagctagagaatgttgaggcacgatacaaacaggaacttacgcaacttaat
gctcggataaccgagatacaggaacagaatgagcggctgatcgtcgctcaggaagatcat
gccacgcagttagcgaacgtcgtaatcgaccacgaggggcgtttggcgcgacttcacgaa
gaattcactgctcgcgaacttgccgtccgcgaggaccttgagcgccaccacaagaacgag
cttgagtcgcttcggtgtcggtataaactgacgacgagcgttatgtcgacgtcttcgggc
accattggcagtgacgtggtcagcagcctgagttcaccacaaggcggagtgactggccca
ttgttactgccagccggaatttcacatagccaagagatcgaaaatcgttggagactccgc
gaaatggaacttgaggaaagaatccgtcaactcgagcgaatgcttcaagacagaaacaat
gattccccttctccggcagtggtagccggggtcatggacaccagctgtacgtcggcgatg
agcagtctgcagatgatggtcgactcccagtatcgcgtcatggccgaaagcgctgtcgga
actttagcagggcccggaatcggcggcggaacgtcaacggcgatggttgaatcgacagtc
gttcggctccagccgtcccacaccaacaacaataatccggcaacagcgatggaactaatc
gagcagcttcgtgcgaaagaggccgaaatccaacggatacagatgcgtctagtttccagc
tgcggaacgggatcgttgccatcattgagcagcgaccgagtatcgattctcagctgcgtc
cacggagacgtcgttctacttgcgtatgacgacaatcatgaaaattatgtcatctttatg
ctcggtccgctgttgcatttcctacacagggactcgctcgaggagcttcggctgagtacg
gatcgggagagatctacgaaacgctggatcattggcgaggtcgtcgacaaagagtactgc
gaggccaggagggcggtgaaccggtataggctagctgttggtacgcgcttcttccgtgtc
aaggttcggccgtgggatcgtcagggagccatgcgtcgagaacaggagcgtcgccaagtt
ctcaaggcggcggcaacggcaacgacaggggcggctacgctgtcagtcccgctcggcaac
aacagtgaaaacgctggtgctaacgtagcgtcagccgtggctctggcaacaacactgagt
ttaaacgctgctacaaccacaacagtaaccgctggagtgggaggaccctcagacggaccg
aatttgccggctagcgccgcttcacccgttgcctcgccagctacttcaatttaa
DBGET
integrated database retrieval system
