Varroa jacobsoni: 111263815
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Entry
111263815 CDS
T07417
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111263815
09123 Folding, sorting and degradation
03018 RNA degradation
111263815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111263815
03041 Spliceosome [BR:
vja03041
]
111263815
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111263815
mRNA degradation factors
5'-3' decay
Lsm complex
111263815
Spliceosome [BR:
vja03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111263815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111263815
NCBI-ProteinID:
XP_022694946
LinkDB
All DBs
Position
Unknown
AA seq
123 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRLPECY
IRGNTIRFLRIPDEVIDMVKEDLQSGQGGGGRGGRGRGNFRGRGGPRGGHHRGAPGGHRG
RGM
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgctgccattgtctttgcttaaaactgcccaaaaccatcctatgctggtggaattgaaa
aacggtgagacgtacaatgggcatcttgtcagttgtgacaattggatgaatattaacttg
cgtgaagtcatctgtacatcaagggatggtgataaattctggcgtttacccgaatgctat
attcggggcaacactatcagattccttcgaattcccgacgaagtcatcgacatggtcaaa
gaggaccttcagtctggccagggtggtggaggccggggtggacgcggccgaggcaatttc
cgcggaaggggtgggcctcggggcggtcaccatcgaggagctcccggagggcatcgcggt
agagggatgtaa
DBGET
integrated database retrieval system
