Varroa jacobsoni: 111263865
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Entry
111263865 CDS
T07417
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
vja
Varroa jacobsoni
Pathway
vja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111263865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111263865
03036 Chromosome and associated proteins [BR:
vja03036
]
111263865
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111263865
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111263865
Chromatin remodeling factors
BAF complex
111263865
PBAF complex
111263865
GBAF(ncBAF) complex
111263865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
BRK
HSA
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
ARL2_Bind_BART
Motif
Other DBs
NCBI-GeneID:
111263865
NCBI-ProteinID:
XP_022695038
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MSGTAVSPAPELSSGSALGAPGMTIPHSPSHGSSAPSHHPNHPGAHVYASSPMGHDPMDR
ERNGAPEAREDGKQPMSAFNQIQQNQLRAQIQVYRLLARNQPIPDQLSQQALRPAGPTPG
PPKPPAPKQNRITPLAKPQGLDPLELLKERENRITQRIAYRIQELSRLPAASLSEKLKIK
ALTELRALRLLNFQRQLRTEVVACMRKDTTLETALNPKLYKRTKRQGLREARITEKLEKQ
QKLEQEKRRRQKHQEYLTAVLQHAKDFKEFHKNVVQQKISKINKAVITYHQNTEREQKKA
QERLEKERMIRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYINNLTKMVVQHKKELKKL
KKTKKPKADGDANREEGEVRVRVIETATGTELSGVEAPLASELDQWLESHPGWEAAPRDA
ETDDSSDEEESPPAPGAPTATDTAVETPPLPQGVAKDDDEYEKNTAAQIQNYYNIAHAIR
ETVTEQSSLLVFGRLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISMITYLMEK
KKVNGPYLVIVPLSTLSNWILEFDRWAPSVVKVAYKGSPNLRRSLQSQLRNSKFNVLLTT
YEYVIKDKATLSKIKWKYMIIDEGHRMKNHHCKLTQVLNTHYTAPHRLLLTGTPLQNKLP
ELWALLNFLLPSIFKCCNTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRR
LKKEVEHQLPDKVEYVVKCDMSGLQRLLYKHMQKGILLTDGSEKDKKGKGGMKTLMNTIM
QLRKICNHPFMFQHIEEAFAEHTGNGNGQLVVGPDLYRVAGKFELLDRILPKFRETNHRV
LVFCQMTSCMTVLEDYLNFREFAYLRLDGTTKSEDRGCLLAKFNDPQSPYFIFLLSTRAG
GLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLVTVNSVEERILAAAK
YKLNLDEKVIQAGKFDQKSTGSERRQFLQAILQDENEEEEEENEVPDDETINQMIARSED
EFNLFQKMDIQRRRDEAKATPRKPRLMEEDELPQWLALNDEEVEKLTHADEDDDKVFGRG
SRARKEVDYSDALTERQFLKAIEDGDVDDFEDEPAAPTTSGRPGRKKRRKVGSDDEEEPA
SGRKRQRKSRGPGAGKDDKSGQVSQLLKRQMKTILNMVINYADADGRVLSESFMQLPSRR
DLPDYYEIIKKPIDLNKMLKRIKDEHYKSLDDLEEDFMLLCTNAQKYNVDGSLIYEDSIV
MQSVFTSARERAEKADEDQLVEDDETEDTGREKKGRGKGAKTPRREAIKKKPRKKYMVES
DEDETEDSD
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggacagcagtgtctccagcaccagagctgagttccggctcagccttgggggcc
cctggaatgaccataccacattcgcctagtcatggctcatcggcgccatctcatcatcca
aaccatcctggtgcccatgtatacgcttccagtcccatgggccacgatccgatggataga
gagcggaatggcgctccagaagcgcgtgaggatggcaaacagcccatgtcagcctttaat
caaattcagcaaaatcagctaagagcacaaattcaagtgtaccgacttctagcccgtaac
cagcctatacccgatcaattgagtcaacaggctttgagaccagcaggacctacaccagga
cctcccaagcctccagctccaaagcaaaatcgaataacgccgcttgccaaaccacaaggg
ctcgatcctctcgagcttcttaaggaacgcgaaaaccgcattacccagcgtatcgcttat
aggatacaagagttatcacgtctcccggctgctagcctatctgaaaaattgaaaataaaa
gctcttacggagttgcgggcattgcgcctgctaaatttccagagacagctgcgcaccgaa
gtggtagcctgcatgcgcaaggataccacattagagacagcactaaatcctaagctgtac
aagcgcacaaagcggcaaggtttgagagaggcacgaattaccgaaaaactggagaaacaa
caaaaactcgagcaggaaaagcgccgccgtcagaaacatcaagagtaccttacagctgtc
ctgcagcatgcgaaagacttcaaagagttccacaaaaatgtcgtccagcaaaaaatatcg
aaaattaacaaggcggttattacgtatcatcagaacactgaacgtgagcagaagaaagct
caggagcgtctggaaaaggagcgtatgatcaggctgatggctgaagatgaggaaggttac
cgaaagcttatcgatcagaagaaagataagcgtcttgcattcctactttctcaaacagat
gaatatatcaacaacctaacgaaaatggtcgtgcaacacaaaaaggagttgaagaaactc
aaaaagacaaagaagcctaaggctgacggtgatgcgaatagagaagagggtgaagtgcgt
gtgcgcgtaattgaaaccgccactggaactgagttaagtggagtggaagcaccactagcc
tccgaattggatcagtggctcgagtcgcatccaggttgggaggcagccccgcgtgacgct
gagacagatgattcaagcgatgaagaggagtcaccacctgctccaggagctccgaccgcg
acggacaccgccgttgaaacacccccattaccacagggagtagccaaagacgacgacgag
tacgaaaagaacacggcggctcaaattcaaaactattacaatattgcgcatgctatccgt
gagacggtgaccgaacaatcgtcattgctggtattcggtcgtctcaaagaatatcagata
aaaggtcttgaatggctagtatcattgtataacaacaatcttaacggtattctggctgac
gagatgggtttgggtaagaccattcaaacgatttctatgattacctatttaatggaaaaa
aagaaagtaaatggaccttatctcgtaattgtgcccttatccacactttccaattggatt
cttgaattcgatcgctgggcccctagtgtcgtcaaggtagcgtacaaagggtcacccaac
ctgcgtcgttccctccagagtcaactgcgaaattccaagttcaacgtgttgttgacaacg
tacgaatacgtgatcaaagacaaggctacactttctaaaatcaagtggaagtacatgatc
attgacgaaggtcatagaatgaagaatcatcattgtaaacttacgcaggtgctcaatact
cactacaccgccccacaccgtcttcttctaactggtactccgctacagaacaagcttcct
gagctttgggccctgcttaatttcctgttgccatccatattcaaatgttgcaatacgttt
gagcagtggttcaacgcaccgtttgcaaccactggtgaaaaagtcgaattgaatgaggaa
gaaacaattctcattatccgtcgtttgcataaggtgttgcgtccattcttactgcgtcga
ttaaaaaaggaagtcgaacaccaacttcctgacaaagtcgaatacgttgtcaagtgcgat
atgtctggactgcaaagattgctttataagcacatgcaaaagggtatcctgctaacggat
ggttctgagaaagacaaaaaaggcaagggtggcatgaagacactcatgaacacaatcatg
cagcttcgaaagatctgcaatcatccgttcatgttccagcacatcgaggaagcattcgcc
gaacataccggaaatggcaatggtcaactcgttgtaggccctgacctctaccgcgtggca
gggaagtttgaattacttgatcgcatcctgccgaaattccgtgaaacgaaccatcgagtg
cttgtattctgtcaaatgacatcgtgcatgacggtactcgaggattacttaaatttccgc
gagtttgcctacctacgactcgatggaactacaaaatccgaagatcgaggttgcctatta
gccaagttcaatgatcctcagtctccctactttatctttctactgtcaactcgtgctgga
ggccttggactaaatctacagacagctgatactgtcataattttcgattctgactggaat
ccgcatcaagatttgcaagcgcaagatcgagcccacagaatcggtcagaagaacgaggtg
cgcgttctacgactagtaactgtcaactccgtcgaagagcgtattctcgctgctgccaaa
tacaaactaaatcttgatgagaaggttattcaggcaggaaagttcgatcagaaatcaact
ggtagcgagcgacgtcagttcctgcaggccattctgcaagacgaaaacgaagaagaagag
gaggaaaacgaggtgcccgatgatgaaacgattaatcagatgattgcccgctccgaggac
gaatttaatctattccaaaagatggatattcagcgccggagagatgaagctaaggctact
ccccgtaaacctcgcctaatggaagaggatgaactaccccagtggctagccctcaacgac
gaggaagtggagaagttaacgcatgctgacgaagacgatgataaagtgttcggccgcggc
tcgagggcacgtaaggaagtcgattattccgacgctctgactgaacgacagttcctcaag
gccatcgaagatggagatgtcgatgactttgaggacgagcccgcggcccccacaacctcg
ggcaggcctggccggaaaaagcgccgaaaggttgggtcggacgatgaagaagaacccgca
tctggccgcaaacgtcaacgtaaaagcagaggtcctggagcgggcaaggatgataaaagc
ggtcaggtaagccagctcctaaaaaggcaaatgaaaaccatactcaacatggtaatcaac
tatgccgatgctgacgggcgcgtacttagcgaaagctttatgcagctgccctcgagaagg
gatcttcccgactactacgagatcatcaaaaagcccattgacctcaacaaaatgctaaaa
cgcattaaggatgagcactacaaatcactagacgacctcgaagaagactttatgctgctg
tgcacgaacgcacagaaatacaacgtggacggctcgctgatctacgaagattcaatcgtc
atgcaatccgtgtttacatcagcccgcgagcgtgctgaaaaggcagatgaagaccagctt
gtagaagatgatgaaaccgaagacaccggacgcgagaaaaagggccgaggcaagggagct
aaaactccgcgtcgggaagccatcaaaaagaaacctcgcaaaaagtacatggtggaaagt
gacgaagatgaaaccgaagacagcgattaa
DBGET
integrated database retrieval system
