Varroa jacobsoni: 111264073
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Entry
111264073 CDS
T07417
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vja03009
]
111264073
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
90S particles
Other 90S particles
111264073
Pre-60S particles
Other pre-60S particles
111264073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
111264073
NCBI-ProteinID:
XP_022695390
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MKIARSGSTKAKKGATWKKGQACSSNPTRRKFRDAVRTGTFKNVIKESGLTSAALSQHDN
KYASSTMDSLLQRTIDHQDATLDRSGSGNEMEDVRSVASSWATDFSACTNMSFNRLMTNW
DPSSALHKEMLAVLAAVTEVIKEKGGQETETEYFAAFLTSLTTLESDLSITAAVALINMV
IKRVPPSLLRQRFSDISQVIYSLLARFAESDHNAVLCSLLNIASFVCRQQDASRWTVETS
SLKKSETCRLFNAVLAFVTHVKPKVRRAAQKNVCGLMRSSPEHPSTILCGAYVNDRMEEF
RQNGNTVSLLHLLTFLSYSLPLLPSKNIKIIAENILRTMKLNDPLVIVQGLTTFSNMFMY
ETTQLLIRPDTNARLINALYEMQPGINDPQPCTAWLMAMRSALVHLHKGDVSLFSLNVWK
FIQVAVNVFLCENETVHAVTEKVIIELLQLCGPIGEEMKTPLPGGIQSTSAEKILTALER
TLTYQFHLAWPNVFAVWGATFSALAKVLPDRLTASVSVLADLRESNNFEYSMQLDHAVGA
AVRALGPKRVLEQVPLRITGVEDDPNFPRSWLLPVLRDNIKETELKFFIDYFFPLTGNLS
RAESAAQQNKKKHMEVAYRVLGNQVWSLLPAFCVRTTDVRETYPKVAPTLAILLTARPDR
RLPILSALRKLITTSTTPSVIGTTADRFLPTLCSLYIKKAESERLALYETIRAFVTVSEQ
ELCCTMFNTAMEKIGTVQGEDATFTNMAFTDIARALLPKVTEAEGQKLYQYCVANLKSGA
RTEQKKAYLTLEDLFRAECCRRIVEENLNDIQKLLVTSVSKVSNASKAPRLRCLRSVLAS
LSSPNQQLVVAVIPEAVLCCRDSAAKVKQAALEVVVECADALQRWSIPNAFSQYISLLMG
GLAGSSTLVSASIIAISHCLRHFREQLQESEDLLKQLIEAICTLVVSPSREIVKAALDFI
KGIFSLIEMDQLNKFSNLIISRVCGMITDDCASHFRLKIKGILIRFVRRLGYDIVACMVP
ESYQKVLTNIRKLENRRRKIKSMTSGCGGSEENDENADAKSQKSQRSRKGDTFEQVLGSD
SDANDEDDNDDGEKRTEQERGKKDRSAWLKEGDEEIVDLMDPSAMRHISTTDPAKYKQKL
AKKLTPRQEAEKAGFKVSEDGKLLITKEMLEEDNPRGKKRGREAAEEDSDLEDIDDLLGA
ISGYAKSSRPKSVNSGVSLKSTKPTGSTKPIGSEYRAKRAMGDVKLKAQKYDPYAYIPMN
RMALNRRKRAKMSGQFSSLVKGAAKGARKARKQRAKQAVFKKR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcccgtagtgggtcaactaaggcaaagaaaggtgccacatggaaaaaagga
caagcctgtagttctaatccgacgcgaagaaaattccgtgatgcggtgcggaccggcaca
tttaagaatgtgattaaagagagcggcctaacgtctgcagctcttagtcaacatgataat
aaatacgcctcgtcgactatggactctcttctccaaaggactattgaccatcaagacgcc
acattagatcggagtggatcgggcaacgagatggaggatgtccgctccgtggcgtcatca
tgggcaactgatttctctgcctgcacaaatatgtccttcaatcgcctcatgacgaactgg
gatccttcgagtgcacttcacaaggaaatgttggctgtcttagcagcagtgacagaagta
atcaaggaaaaaggcggtcaagaaacagaaacggagtattttgcggcatttctcacatcg
ctaacgacccttgagtccgacctaagtatcacagcagcggttgcactcatcaacatggtt
atcaaacgagttccaccatctcttctccgtcaaaggttctctgacatctcacaggtgata
tattcgcttttagcccgtttcgcggagtctgaccacaacgccgttctatgtagtctcctg
aatatagcgtcgttcgtctgcagacaacaggatgcctctcgctggacggtggagacaagt
tctttgaaaaaatccgaaacctgtcgactcttcaacgccgttctggcctttgtgactcac
gtaaagccgaaggtgaggcgagcagcgcaaaagaacgtctgtggcttgatgcgttcatca
ccagaacatccgtcaacgatactgtgcggagcctatgtgaacgaccgcatggaagaattc
cgtcagaatggcaacaccgtgtctctactacacctccttacctttctctcatatagcctt
cccttgttaccatcaaaaaacatcaagatcatagcagaaaacatcctcaggacgatgaag
ctgaacgatcctctcgttatcgtacaaggcttgacgacattctcaaatatgttcatgtac
gagacgactcagctactgattcgaccggatacaaatgccaggctcataaatgctttgtat
gaaatgcaacccggaatcaacgatcctcagccatgtactgcttggcttatggcaatgcgt
agtgctcttgtacatctgcacaagggggatgtatcgttattttctttgaacgtctggaag
tttatccaggtcgccgttaacgtgttcttgtgcgaaaacgaaactgttcatgccgtcacg
gagaaagttataattgagttgctgcagttatgcggtccaattggggaggagatgaagaca
cctttaccaggtggcattcaaagtacctccgccgaaaagattctgaccgctcttgagaga
acgctcacataccagttccacttggcatggcccaacgtattcgctgtgtggggtgctacc
ttttctgcgcttgctaaagttctacccgataggcttacagctagtgtctccgttttggcg
gatcttcgtgaatcgaacaactttgagtacagtatgcagcttgatcatgcagttggtgcg
gctgttcgagccctcggacctaaacgtgtactggaacaggtaccattaaggattacgggc
gtggaggacgatcctaactttccacgaagttggcttttgcccgtactgcgtgacaatata
aaagaaactgaactaaagttcttcattgactacttcttccccttgactggtaatctaagt
cgagcagaaagcgcggcccaacagaataaaaagaagcatatggaggtcgcgtatcgtgtt
ttgggtaaccaggtgtggtctttgctgcctgcattttgtgtgcgaacaactgatgtgaga
gaaacttatccaaaggttgcaccaactcttgctatactgctaactgccaggcctgaccga
cgtcttcctatactgtcggctttacggaaacttatcacgacaagcacgacgccaagcgtc
atcggcactactgctgataggttccttcccacgctgtgttctctctacattaagaaagcg
gaaagcgaaaggcttgccctgtatgaaacgattcgagcttttgtcacagtatccgagcaa
gagctttgttgtacaatgtttaacacagcgatggaaaaaataggaacggtgcaaggtgaa
gacgctacatttaccaatatggcctttacggacatagctcgggcactactgcctaaagtt
acagaggctgaaggacaaaagttgtaccaatattgtgtcgctaacttgaagagcggagcc
cgaacagaacagaaaaaagcttatctgacccttgaagacctattccgcgcggaatgctgc
cgccggatcgttgaagaaaacctcaacgatattcaaaagctactcgttacatctgtttca
aaggtatcgaatgcgtcaaaggcccctcgcctccgctgtttaagaagcgtcttggcaagt
ctgtcgtcaccaaaccaacaattggtcgtagctgttatccctgaagcagtattgtgctgc
cgagattctgccgcaaaggttaaacaagctgctctggaggttgtcgtggaatgcgctgat
gctctacaaagatggagcatcccgaatgcgttcagccaatacatatctctgttaatgggg
ggcttggctggatcgtcgacgttagtctccgcttctataattgcgattagccactgcctc
cggcatttccgtgagcagcttcaggagagcgaagatcttctaaaacaactcattgaagcc
atttgcacccttgtcgtgtcaccttctcgagaaatcgttaaagctgctcttgatttcatt
aaagggattttcagcctcattgagatggaccaacttaataaattttccaatcttatcatc
tcacgtgtatgcggtatgataacggatgactgtgctagtcatttccgcttaaaaattaag
ggaattctgattcgttttgtccgccggttgggttatgacatcgtggcttgtatggtgccc
gagtcctatcaaaaggtgctcacgaacattcgtaaattggaaaaccgccgtcgaaaaatc
aagagcatgacgagtggttgcggtggaagcgaggagaatgacgaaaatgcagatgcgaaa
tcacaaaaaagtcaacgcagtcgaaaaggagatacttttgaacaggtccttggatctgac
agtgatgcaaacgatgaggacgataatgacgatggagaaaagcgaacagagcaagaacgt
ggaaagaaggaccgcagcgcctggttaaaggaaggcgatgaagagattgttgatctaatg
gacccatcggcaatgaggcatatttcaacgaccgatcctgcaaaatacaagcagaagctg
gctaaaaaactcactcctaggcaagaagccgagaaagccggatttaaggtttctgaggac
ggcaaattgcttatcaccaaggaaatgcttgaagaagataatcctcgtggtaagaagcga
ggccgcgaggctgctgaagaagactcggacttagaagatattgatgacctgctgggagct
ataagcggttacgctaaatcttcaagaccgaagagcgttaacagtggtgtgagtcttaag
tcgacaaaacctacagggagcacaaagccgattggttccgaatatcgcgcaaaaagagca
atgggcgatgtaaaattaaaggctcagaaatacgacccgtacgcctacatacccatgaat
aggatggccctcaacagaaggaaacgtgccaaaatgtctggtcagtttagtagccttgtc
aagggtgcggcaaaaggagcccgaaaagcgcgcaaacaacgggctaagcaagcggtcttt
aagaagcgatag
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