Varroa jacobsoni: 111264191
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Entry
111264191 CDS
T07417
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111264191
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
111264191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
VPS13_M
SWIM
EIIBC-GUT_N
FapA
Motif
Other DBs
NCBI-GeneID:
111264191
NCBI-ProteinID:
XP_022695603
LinkDB
All DBs
Position
Unknown
AA seq
1960 aa
AA seq
DB search
MEWGEEGDSLSFEDSERFDEDSLCSWMSERESICNHWRGWKKPSPPSQTTASAKYNYSGN
GKNESSLSGVVTSLVELSAREVAAHIPFEVVEHVYPPVPEQLQLRIAFWSFPESEEDIRL
YSCLATGSADEFTKGEHLFKTKATRDLLQIGFHLSATVKPSGLGSGGGQSGSKSQQTPAA
NPATKSSQFNVAVTFDRRRITSCNCTCVSTASWCSHVVAVCLHRIHQPTTVCLRAPVSES
LSRLHRDQLQKFAQYLISELPQQILPTAQRLLDELLSSHETDINTLRGAPDPTAGASVYE
QTSWCLDEGTLHESIRKILVKLSMPSPIVFSDVNFLSSTSPPAASEWQSLLRPLRGREPE
GIWNLLSIVREMFRRADRNAVPLLELLTEEMLACEPILMWWFNTKVSMHTGSTGSQGHRS
SNNNGVSHSTSQSSQHTCASLCDEIVVLWRLAALNPALSPLEKTTFFDQMCQWHCRVLES
VFRSKNSQGGNAGNNNNNNNNGGTNNMTLNKRWADIDVFPGFKPALESCLLDWLDYPIPS
ITYNEGGACRFYSPYMHLRLADHSQSGSKGRPVEIGRKSPYNVPTVSGPFDTCLSSTRSS
LSSEGFNENLGNNNNNNINVNNNNNNNNEPSGSQHVQPPQAGAGNNNNNNNNNVSVEVAE
ARDESGNSGNPDVPGFSRPTGTNVAGGGAGAVGVAALVEPAVPNPAAANPPDDEYQMYYY
DAAQARAAAQQNYGMPVAQKPNPIPEPSELSKQIKKMEDRLEILFARAEALHAHGHTQEA
CKLAFRLAQELLASPPSFDMDQPTASLSSTTSGGKANNGGKRGRGKFNPACHQASLLASA
TLSKAAFLCQVLGENHTDHHYLAFRIGIFGLELVRPPASTKPLEVRLVNQEQDLVTLLKK
IPLGHPEMHELRERATALRERRLVSRGEALLPLMLASYIFDALVLSKEQPGSSGKNSSSY
SGVVCRHRLGGDEELGFDAAVAALGLKANVSEAEHPLLCEGTRRQRGELAITLLMHYKDD
QHKLALIMDKLLDKEVHQMYKNPPSTLTASLYGAGGGSSSGSGTKETTAATPQASATSEE
HASASWRRGPEDEGANSPPSGWEEDYKAWEAKFRCTNFKAMFRRHHSSNGMASIDSSAPE
TTSSDNSPTLIRRRVAARAAAMESSDSGSSGESSDSFASSSSGDRNKGNPMFHASGASTG
GAGPQPTPGPSGLAGAGALTTAPNSNLVVNATQQQQQQRDMNLASAAAAAAAAAAASGVG
SPAVGPNIFAVDEFNPTMVAGPSTIFTMDEFNPSNIQMVQTQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQLNRNQPLVTQMKNITVNSGQASQNGARGGFKGGSKRS
FHPSIPNQPSEASAHFMFELAKTVFTKAGGNNSMAVNFTQPSSSQNHRGPHRALHMCSFQ
IGLYALGLTNAVSPNWLSRTYSSQVSWITGQAMEIGCSAILFLIETWEGHLTPTEVVTLA
DKASRGRDPSMQRACAELALSCLPHAHALNQNEIQRALLQCKEQSADMLKRACLTVEQAA
QGGGVIPEVLFDVARRWYDLYEEGLGDRPASPPPPQRQQHQHQQQQQQQPHQHPALPPAP
HPAASHNQHGAMEQAPHMFVDQPAMQMPPSLPTYPHTTYMPPPQHGSPYSPYSMPPPFVV
PGAIHPAYLPQYHPTYPPPPQSFYPGTPTGPQYHPQPQQATHPSRPHVLPPHPPHAPPHH
GPPPLLAPLVATPPPNSQAPPPQQPPQNQTSPDALKYLVSAYRVGLIAMDLLAKKIHDER
MQAKYARTPSYGEDVKWLLGVAKKLGTSCLQEFCVCVVNSVASPFVLYDIITEIAQFLAK
NQPGGPSHQVIRSPLLTPLIQKCQQMFIACIHAKLYHISPAEYDDFLSIIRSARQAFQLS
PAGLVQFSDHLQTLRRSKSCKKDLWTRIVSAQQQMNQQSL
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggagtggggtgaagaaggcgacagtctgtcgtttgaggacagcgaacgatttgatgaa
gactcgctttgttcatggatgtcggaacgcgagtcgatttgcaaccactggcgtggctgg
aagaaaccgtcgccaccttcgcagaccaccgcgtcggccaagtataactatagcggaaat
ggaaaaaatgaatcttccttgagcggcgtcgtgacttcgttagtagagctctcagcccgc
gaggtagcggcccatatccccttcgaggttgttgagcatgtatatcctccagtaccggag
caactccaacttcgtattgctttctggagctttccggaaagtgaggaagatatcaggctt
tactcatgcttagcaactggctccgctgatgagtttacgaaaggcgagcacctttttaaa
accaaggccacccgtgaccttcttcagatagggttccatttgagtgccacggtgaaacct
tcgggcttgggcagtggcggtggccaaagtgggtcgaaaagtcagcagactcctgccgcc
aatccggcaacgaagagttcacagttcaacgtcgctgttacgttcgaccggcgccgtatc
accagctgtaactgcacctgcgtatcaacagcgtcgtggtgttcacacgttgtagctgtg
tgcctgcatcgtatccatcaaccgacgacagtgtgccttcgagctcccgtttccgagtcg
ctctcacgactgcaccgcgatcagctgcagaaatttgcgcagtatctcatctcagagtta
ccccagcagatattaccaacggcacagcgactccttgacgaattgctgtcgagccatgag
acagatattaacacgctccgaggggcgcctgatcccacagccggtgcgtctgtgtatgag
caaacgtcgtggtgtctcgatgaaggcaccctgcatgagagtattcgtaagatcctggtc
aagctctcgatgccgtcgccaattgtgttttccgatgtcaatttcttgtcatcgacgtct
ccgccagcagcatcggaatggcaaagtctcctgcggccactacgcggtcgtgaaccggag
ggcatctggaatttgttgtcaatcgttcgcgagatgtttcgacgggccgatcgcaacgcg
gtccctctgctcgaactcctcacggaggaaatgctcgcatgtgagccaattctcatgtgg
tggttcaacacgaaagtgtcgatgcatactggatctaccggtagtcaaggccatcgttct
tcgaacaacaacggggtttcgcattcgacatcgcagagctcacagcatacatgcgcgtcg
ttgtgcgatgaaatcgttgtgctctggcgtctggcagcgttaaatcctgccttgtcaccg
ttggaaaaaacgactttcttcgatcagatgtgccaatggcactgtcgtgtcctcgagtcc
gtcttcagatcgaagaattctcaaggtggaaatgcaggcaacaacaataataataacaat
aacgggggcacgaataatatgacccttaacaaacggtgggcagatatcgatgtgtttccg
ggcttcaagccggctcttgagtcgtgcttgttagactggcttgactatcctattccaagc
atcacgtataacgagggtggtgcatgtcgtttctactcgccgtatatgcatctgcgatta
gcggatcactcacagtctggcagtaagggtcgacctgttgaaataggacgcaagtcgccc
tacaacgtgcccaccgtctcagggccattcgacacttgcctgagctctacgcgcagctct
cttagctccgaaggctttaacgaaaatcttggcaacaataacaacaacaatatcaacgta
aacaacaacaataataataacaacgaaccgagcggcagtcaacatgttcagcctccgcag
gcaggcgcaggaaataacaacaacaataataataacaacgtgtcagttgaggtcgccgag
gccagggatgagagcgggaactcaggcaatccagatgtgccaggcttttcccgaccaact
gggacaaatgtcgctggcggtggagctggagccgtcggagtggctgcccttgttgagccg
gccgtccccaatcctgcggctgcgaatccgccagatgacgagtaccagatgtactattat
gatgctgcccaggcacgcgccgctgcacaacagaactacggaatgccggttgcacagaaa
ccgaatccaatacctgagccgtccgagttgtctaagcaaattaaaaaaatggaggaccgt
ttagaaattctgtttgcgcgagccgaagcgcttcatgcccatggccacacgcaggaagca
tgtaagctcgccttccgtctggcccaggaactactggcatctccgccttcttttgacatg
gatcaaccgacggcgtccctgtcatcgactacttccggaggaaaggcaaacaacggtggc
aagcggggccgagggaagttcaaccccgcctgtcaccaggcatcgctcttagcgtcggca
actctgtctaaagccgcttttctgtgccaggtgttaggggagaaccacaccgatcatcat
tatttggcgttccgcataggaatcttcggtctggaactggtacggccaccagcgtcgacg
aagccgttggaagtgcgtcttgtcaaccaggagcaagatctggtcactttgctcaagaag
atcccgcttggccatcctgagatgcacgaattacgggaaagggcgaccgctttaagggag
cgtcgccttgtatcacgcggagaggctctcctgcccctcatgctggcgtcgtatattttc
gatgccctggtgctctccaaggagcagccaggttcgtctggaaaaaactcttcctcttat
agtggggttgtgtgccgtcatcgtctgggaggcgatgaggaactcggctttgacgccgct
gttgccgcactcggactaaaggccaacgtgtccgaggcggagcatccgctcctctgcgaa
ggcacacgaagacagcgcggcgagttagctattacactactgatgcattataaggatgac
cagcacaagctggccttaattatggacaagcttctggataaggaggtacaccaaatgtat
aagaaccctcctagcacccttacagcctcactttatggagcgggcggcggcagcagcagt
ggaagcggcacgaaagagacaactgcagctacgcctcaagcgtcagcgacatcggaggag
catgccagtgcgtcctggcgacgaggaccggaggacgaaggcgccaacagcccaccctcc
ggttgggaggaagactataaggcgtgggaagcgaaattccgttgcacgaacttcaaggca
atgttccgacggcatcattcgtcaaatgggatggcatccatcgattcatcagctccggag
acgacttcgtcagacaactcacctacgttgatccgacgaagggtagcagcccgtgcggct
gccatggaaagcagcgattcgggctctagtggcgagagcagcgatagcttcgcctcctcg
tcttcgggggaccgaaacaaggggaatccgatgtttcacgcaagtggcgcatctacaggt
ggtgcgggaccccagcccacgccgggaccatctggtctcgctggggccggcgccctgacc
actgccccaaattccaaccttgtcgtgaatgccacccagcagcagcagcagcagagggac
atgaatttggcgagtgctgcagcagcagcagctgccgccgctgccgcatcaggggtgggt
tcacctgcggttggcccaaacatatttgctgtcgatgaatttaacccgacaatggtggcc
gggccctcaaccatattcacaatggacgagtttaatccatccaatatacagatggtacag
acgcaacaacagcagcaacaacaacagcagcaacaacagcaacagcagcagcagcagcag
cagcagcaacaacaacaacaacaacaacagcagcagcagcagcagcagcagcagcagcaa
caacaacagcttaatcgtaaccagccgctggtgacacaaatgaaaaatatcaccgtgaat
agcgggcaggctagccagaatggcgcccggggcggattcaagggtggatcgaaaagaagt
ttccatccgagcattcccaatcaaccatccgaggcgtctgcgcattttatgtttgagcta
gcaaagactgtcttcacgaaagcgggtggtaataattctatggccgtcaacttcactcag
ccatcgtcgtcacaaaatcaccgaggtccacaccgtgcacttcacatgtgctcgttccag
atcgggctgtacgcacttggtcttaccaacgccgtctcacccaactggctatcaaggacg
tattcatcgcaggtatcctggatcactgggcaggccatggagatcggctgttcggcaatc
cttttcttgatcgaaacctgggaaggtcatctcaccccaaccgaagtggttaccctggct
gacaaagcgtcccgcggcagggacccttcaatgcaacgcgcctgtgctgagttagcgctc
tcgtgtctaccacatgcgcatgccctaaaccagaatgaaattcagagagcgcttctacaa
tgcaaggagcagtcggccgacatgctgaaacgggcgtgcctcacagtggaacaagctgct
cagggtggcggcgtgattcccgaagtgctattcgatgttgcccgtcgctggtacgatctc
tatgaggagggccttggcgaccggccagcttcgcctcctccgccgcaacgccagcagcat
caacatcaacagcagcagcagcagcaaccgcaccagcatccggccctgccacctgcccct
cacccggcggcgtcgcacaatcagcacggcgctatggagcaggcgccacatatgttcgtc
gaccagccagccatgcaaatgccaccctcacttcccacgtatcctcacacaacgtatatg
ccaccgccgcaacatggcagcccatactcgccatattcgatgccacccccgttcgttgta
ccgggtgcgattcatccggcatatctgccacagtaccaccccacctatccgccgccgccc
caatcgttctatccgggcaccccaactggccctcaatatcatccacagccgcagcaagcg
actcatccgtcgaggcctcacgtgttaccacctcatccgcctcatgcaccaccccatcat
gggccaccgccgttgctggcgcccctcgtggccacacctccaccaaattcccaggcccct
ccacctcaacagccgccacagaatcagacgtcgcctgatgcactgaagtatcttgtgtct
gcgtaccgggtcggtttaatcgctatggacttgctggctaaaaagattcacgatgagcga
atgcaagcgaaatacgcgcgtactccgtcatacggggaagacgttaaatggcttttagga
gttgccaaaaaattaggcacgtcctgtctgcaggaattctgtgtctgcgtcgtcaactct
gtggcctcaccattcgtcctctacgatatcataacagagatagcacagttcttagctaaa
aatcaaccgggagggccgtcacatcaggtgattcgttcacccctgctcacgccgctcatt
cagaagtgccagcagatgtttatcgcgtgtattcacgctaaactctatcacatttcgccg
gcggagtacgatgacttcctctcaataattcgttccgctcgtcaggcgttccagctgagc
cccgctggactcgtccaattcagcgatcatctgcagacgttgcgccgatcaaaaagctgt
aaaaaagatctctggacaagaattgtttccgcccaacaacaaatgaatcagcagagccta
tga
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