Varroa jacobsoni: 111264491
Help
Entry
111264491 CDS
T07417
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vja
Varroa jacobsoni
Pathway
vja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111264491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111264491
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111264491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
111264491
NCBI-ProteinID:
XP_022696188
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MSRPVGPLNGPPKPAVVSSQEFIVRIPKATKRRHHVMRFMQSRNQTPLEWSQVRMERENN
LKEYRTESDELPKYGAGSEYGRELKDEARRKKFGIVRKKYNPDDQPWHLRVGGKQGKKFK
GIREGGVMENASYYVFSKAPDGVFEAYPVDEWYNFTPIQRYKALTAEEAEDAYSQRDKII
NHFAIMVKKRLAEAQGTTFEEDKDGASTKEPGSSSKKSRESLKLTDMDDWHGDSDFSGAE
SGGDNAEEEAAKKKKKRKDQKKKDKKSQESDSSAQEESDEGDFDGREVSYMTSGSESSGD
EPEDEKVNKQLKGVEDEDALRQLVLSDEDDDEDDENKKDEDDENKNEEDGDKTGDGKGKD
GKKSSGGDKDSGGKGGSDRGANKNSAGGGKSSDESSSENSDSDLDDSRLLGSSAVFMQGK
RKDGGSRSGTPTKDVINGTNGILKKVKAPGGSIKRKKEETPTKEGQGTSTQGPSQHGTQQ
SHLPSAGLEQATKKPKIELNLGINLNNGGSSSSSNNSSTVATVGPSGSRGGVDNTPLAQV
EGINEEAVRRYLMRKPMTTTELLQKFKSKKTGLTSDQLVNLIAQILKRLNPEKQKIKDKL
YLSIRQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcccggtaggcccacttaatggtccgccaaaacccgcagtagtgagctcccag
gagttcatagttagaattccgaaagccaccaaacggagacatcatgttatgcgcttcatg
cagagtcggaaccaaaccccattggaatggagccaagtccgcatggagcgcgaaaacaat
cttaaagaatatcgcacggagtcggatgaactccccaaatatggagcaggctctgaatat
gggcgtgaactaaaagatgaagctaggcgcaagaaattcggaatagttcgcaaaaaatac
aatccagatgaccagccatggcaccttcgggttggcggaaagcaagggaagaaatttaaa
gggatccgtgaaggtggagtaatggaaaacgcgtcgtactacgtcttttctaaagcaccc
gatggcgttttcgaagcatacccagtagatgaatggtacaatttcactcctatacagcga
tacaaggctttgactgccgaagaggccgaggacgcgtatagccagagagacaaaatcatc
aaccatttcgctatcatggtcaaaaagcgattggctgaagcgcaaggaacaaccttcgag
gaagataaggacggggcctctaccaaggaaccaggatcttcttccaagaagagtcgcgag
agcctcaaactgacggacatggacgactggcatggtgactctgacttctccggcgctgag
tccggtggcgacaatgcagaagaagaagctgctaaaaaaaagaaaaaacgaaaagaccag
aaaaagaaggacaaaaaatctcaagaaagcgattcgtccgctcaggaagagtccgatgaa
ggagatttcgacggtagagaagtgagctacatgacttcgggaagtgagtcatccggagat
gaacccgaagatgagaaagtcaacaaacaactgaaaggagtggaagacgaagatgctctt
cgacagttagtactctctgatgaagacgacgatgaagatgatgagaacaaaaaggacgaa
gacgacgaaaataaaaatgaagaagacggtgacaagactggtgatggaaaaggaaaagat
ggcaaaaaaagttcaggcggggacaaagattccggaggcaagggtggtagtgaccgtgga
gccaataaaaattcggctggaggtggtaaaagttcggacgaaagctcgtcagaaaattcc
gattcggatcttgacgactcacggttactaggaagcagcgctgtttttatgcagggaaaa
cgcaaagacggaggctcgcgttcaggaacgcctactaaagatgtcattaacggaacaaac
gggattttgaaaaaagtgaaagctcccgggggatctatcaagcgcaagaaagaagaaaca
cctacaaaggaaggacagggtacatctacgcaaggaccgtcgcagcatgggactcagcag
tcacatttaccaagtgccgggttggagcaagcaacgaagaagccaaaaatcgaactgaac
ctcggaatcaaccttaataacggtggcagcagtagcagcagcaacaacagttcaacggtt
gctactgtaggcccctcagggtctcgtggaggggttgacaacactccgctggcgcaggtc
gaaggaattaacgaagaggccgtgcgaaggtatctcatgcgaaagccgatgaccacaacg
gagcttctgcagaagttcaaatcaaagaaaactggcctcacctcagatcagttggtcaac
ctaattgcccaaattcttaagcgcttgaatccggagaagcagaaaatcaaagacaaactt
tacctatccatcaggcaataa
DBGET
integrated database retrieval system
