Varroa jacobsoni: 111265138
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Entry
111265138 CDS
T07417
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04986
polycystin 2
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vja03037
]
111265138
04040 Ion channels [BR:
vja04040
]
111265138
Cilium and associated proteins [BR:
vja03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111265138
Ion channels [BR:
vja04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111265138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
DUF4179
DUF2537
Motif
Other DBs
NCBI-GeneID:
111265138
NCBI-ProteinID:
XP_022697290
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MYGGPESDHISYGKPASGIRPITGQQARSAWKNNRPRSKDLEGTLGSGYDEIVDDRSEVF
AEPPKGCFKTIRSLWATRQMVADTSDKDWLVKTTLRELFIYICFLCILCILTFGMMSPTM
YYQTKVLNDLFLDSSFKDNSGSLRGSTNLDNFWQFVDDVLINSLYWDTWYNNQSLVRDDK
NILYENRMLGSPRFRQLRVRNNSCNVHSNFKKVISQCYDNYSPFFEDTEPYGLMNGSAWT
YHKEKELDGYDHWGLLYRYSGAGYYSDIGTTKEQALASILELKDNLWINRGTRVVFIDFT
VYNANVNLFCVVKLVFEFPATGGMVPSWSFRTVKLLRYVSTGDYMILGCEFLFLLYIFYY
VIEEFLEIKANRTAYFKSIWNILDILVIIISGVCIVFSIYRTIMVNSLLVDLLKKPDEYA
DFGKLGFYQFQFNNAVAMAVFFAWIKIFKYISFNKTMTQLSSTLSRCSKDVAGFSVMFFI
VFFAFAQLGYLLFGTQIKGFSNFINAVFTLLRLILGDFDFEELEQANRVLGPIYFLSYVF
FVFFVLLNMFLAIINDTYAEVKVEIAQQKNEFEIVDYFKKGYNNFLTKIGKRDQIVDIQN
AMRMADTDNDNKLTFEEVRKSLRGQNYSDTEIEMLFAKYDIDGNRELNEQEVKAMMAHLE
GQKNLLDQEIENEQKSIIPDASSGGGGLDGASLEEITVLVKRVDRMEHSIAQIVNKIDAV
LRGMEEMENKKKRRRDGMSKILDTISEADIDEKEKRLRMEKLVKEELLRTDSESSLKDPT
NNL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggccccgagagtgaccatattagctatggcaaaccggccagcggtattcgg
ccgataacaggccaacaagcgcgttcggcctggaaaaataacaggccccgttccaaagat
cttgaaggaacgctcggcagcggatatgacgagattgtcgatgatcgcagcgaggtgttc
gccgagccgcccaaaggatgcttcaaaaccatccgctcgctatgggcaacacgccaaatg
gtcgcagacacatcggacaaggactggctcgtaaagaccaccttacgtgaactcttcatc
tacatttgtttcttgtgcattttgtgcattctgacgtttggtatgatgagtccgacaatg
tactatcagaccaaagttctcaatgatctgttccttgattcgagttttaaagacaactct
ggcagtctgagaggctcgacaaacctcgacaacttttggcagttcgttgatgacgtgttg
attaactcgttgtactgggacacctggtataacaatcagtcattggtaagggatgacaaa
aacattctctatgaaaatcgcatgcttggatcgcctcgtttccgccagctacgtgtgcgt
aacaattcgtgcaatgtccacagcaactttaagaaagtcatctcgcagtgctatgacaat
tattcaccattcttcgaagacactgaaccgtacggccttatgaacggctcggcctggacc
taccacaaggagaaggagttagatggttacgatcactggggcctgctctaccgatacagc
ggtgccggttactactcagacatcggcacgacaaaagagcaggccctagcgtccattctg
gagttaaaggacaacctttggattaaccggggcaccagggttgtgtttatcgacttcacc
gtctacaacgctaatgtgaatttgttttgtgtcgtcaagcttgtattcgagtttccagct
accggaggcatggtcccgtcatggagtttccgcacagtaaaacttctacgatatgtctcc
accggggattacatgatcctcggttgtgagttcttattcctgctctacatcttttattac
gtcatcgaagagtttttggagatcaaggctaatcggacggcctactttaagtcaatctgg
aacatcctcgacattttagtaatcataatttcaggtgtgtgtatcgttttctctatatac
cgcacgataatggtgaattcgttacttgtcgacctgctcaaaaaaccagacgaatatgcc
gacttcggtaaactgggtttctaccaattccagtttaacaacgcagtcgcaatggcagta
ttcttcgcttggatcaagattttcaagtacatctctttcaacaaaaccatgacacagctc
tcgtcgacgctgtcacgctgttcaaaggacgtcgccggcttctcggtaatgttcttcatc
gttttcttcgcgtttgcccagctcggctatttattgttcggcacccagatcaaggggttc
agcaactttatcaacgccgtattcacccttctgcgattgattctcggcgacttcgatttt
gaggagctcgaacaggccaaccgtgtgctcggaccaatctatttcctctcgtatgtgttc
tttgtgttctttgttcttttaaacatgtttttagcaatcatcaacgatacatatgccgaa
gtaaaagtagaaatcgctcagcagaaaaatgagttcgaaattgtcgactacttcaaaaag
ggatataacaacttccttacgaaaataggtaaacgggatcagatcgtcgacattcagaac
gcgatgcgtatggccgataccgacaatgataataaattgacctttgaagaagtacgaaag
agccttcgcggccagaactacagcgataccgaaatcgaaatgctgttcgccaaatacgat
atcgatggaaaccgagagctcaacgagcaagaggtcaaagcgatgatggcacatctcgaa
ggccagaagaacctacttgaccaggagattgaaaatgagcagaaaagtatcataccagat
gcttcgtcaggtggtggaggcttggatggcgcaagcctcgaagagatcaccgttttggtg
aaacgcgtcgaccgcatggagcactcgatcgcacagatcgtcaacaagatcgacgcggtc
ctgcgcggcatggaggagatggaaaacaagaaaaaacgccgtagagacggcatgtccaag
atccttgacacaatctccgaggcggacatcgacgaaaaggagaagcgacttcgcatggag
aaactcgtaaaagaagaactacttcgaaccgattcggagtcatctcttaaggatcccacg
aacaatctttag
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