Varroa jacobsoni: 111265268
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Entry
111265268 CDS
T07417
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vja03041
]
111265268
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111265268
Spliceosome [BR:
vja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111265268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
DNA_circ_N
Selenoprotein_S
Motif
Other DBs
NCBI-GeneID:
111265268
NCBI-ProteinID:
XP_022697526
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MAFRNGGSHSSNGGDFSGPRSGGGGSLRQNGFQGGNAGGYGGGGHAGYQNGGAGAGFRRT
GGAGAGGPRAGGDRGGDRRGGGFAGGRGGAGAGGRPGGGPNKTVGPVGPLTKIDWSTEQL
ASFEKSFYRPHATSQARTQQEVDEHRRELKVTIRGRDVPIPYTTFEEANLPDFIIRHLHQ
VKFQKPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYTLPALVHIWGNNGHRGYRPPGSP
MVLVLAPTRELAQQIQQVAAEFGRGAGIKSVCIFGGAPKGGQLREMDRGCEICIATPGRL
IDFLESGKLSLRRRCSYLVLDEADRMLDMGFEPQIRKIIGQIRPDAQTLMWSATWPKEVR
MLAEDYLKEYVQLNIGALSLSANHKITQVVEVCTEAEKDEKLMALQRKFSEEKDAKVLIF
AETKKKVDDLSIRLRQCGFHAISIHGDKSQQERDWVLQGFRSGDCQTLVATDVAARGLDV
DDIRYVVNYDYPHSSEDYIHRIGRTARSNKTGTAFTFFTSGNAKQARDLIGVLKEAGQMV
TPELYQLAGSKAGRFGRAQPPRYRNPNQPFSQAYGNRGGYGSRIGGYGSNGVSSAGYGND
GRQRSFHGSSAGHAGGYGGAPGRDFQRQNSMPPRGGTSGFGGRGKDSSSSHDNNRGGDRK
PRDDGGGRGTDRGDRSARTGRDDRAGGAGERNDRGDNRRQQAAAGGGGADHHRRQDGSGG
INGSAGSGGGGGGGGSGGQRRERGDRPDRAQHQQGAGQQDINSTGPNGGQHPNARRYDSS
KHFTMGNPTHNSHHYSQHHHQPPTHRVGGAGAATTPGGIIGQNSFGGAVAQNGFSEAAQN
GFAPTSAISSLNGMTHQGAVSGPQPSSTQAGGQGLVTSQNASLGGGGGRMTHWTNVPSAV
GAAPASLGGTTVGGSSALNGGLGAGLGGGIGGRTSNSFVVGSPSPHSPQGPHYAASPLSH
ASFQAAQNYGGPTGSPGQISAPFGHYPVPQYQSPPYYQGLKRECEGNEMTSRWNGKYLIH
RIDV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcattccgcaacggaggcagccattccagtaacggaggagacttctccgggccgcgt
tcaggtggaggaggaagcctccgacagaacggcttccagggaggcaatgctggaggctat
ggcgggggtggacatgctggttatcagaatgggggcgcgggagcaggattccgtcgtact
gggggcgcaggtgccggtggacctcgcgcgggaggcgatcgaggtggagaccgtcgcgga
ggtggatttgcaggaggtcgtggcggtgccggtgctggaggacgtcctggagggggtccc
aacaaaaccgtcgggcctgtgggacctctaacgaaaatcgactggagcaccgaacagctc
gccagctttgaaaagagtttctaccgtccacacgccacttctcaagcgcgaacccagcaa
gaagttgacgaacaccgccgcgagcttaaggttacgatccgcggccgtgacgtgcctatt
ccttacacaacgttcgaagaggcgaacttgcccgacttcatcattcgccatctgcatcag
gttaagtttcagaaaccgacggctattcaggctcaaggctggccaatagcattgtccggc
cgtgatatggtcggtattgcgcagactggctcgggaaagacactcgcgtacaccctaccc
gcacttgtgcacatctggggcaacaacggtcatcgaggttatcgtccaccgggctcaccc
atggttcttgttcttgcgccaacgcgtgaactcgcgcaacaaattcaacaggtggcagcc
gaatttggccgaggtgcaggaatcaagagtgtgtgcatctttggcggagccccaaagggt
ggccaactgcgtgagatggatcgtggctgtgagatatgcattgcgactcctggccgtctc
atcgacttccttgagagtggcaaacttagcctccgtcgacgctgctcctatctagtgctc
gatgaggccgaccgtatgctcgatatgggcttcgagccgcagatccggaagattatcggc
caaattcgaccggacgcacagactcttatgtggagcgctacgtggccaaaggaggtgaga
atgcttgccgaagattatctaaaggaatacgttcaactgaacatcggagcgctgtctttg
tccgccaaccacaagattactcaagtggtcgaggtctgcactgaggcagaaaaggacgag
aagttaatggccctgcagaggaagttctcggaggaaaaagatgctaaagtgttgatcttt
gccgagaccaagaagaaagttgacgacctgtcgattcgactccgccagtgcggtttccac
gcgatcagtatccacggagacaaaagccagcaagaacgtgactgggttctccagggcttt
cgcagcggcgactgccagactttggtggcgacagatgtggctgctcgaggcctggacgtt
gatgatatccgctacgtagtgaattatgactatccgcattcgtctgaagactacattcac
cgtataggacgaactgctaggtcgaacaaaactggtacagctttcactttcttcacatcg
ggtaatgctaaacaggctcgtgatttgattggagtgctgaaggaagcgggtcaaatggtc
actcccgagctttaccagctcgcgggtagcaaagcgggccgctttggaagagctcagcct
cctcgttatcgcaatccgaatcagccgttcagtcaggcttacggaaaccgtggcggctat
ggaagccggattggcggttatgggtcgaatggcgtatcgtcggcagggtacggaaatgat
ggccgtcagcgaagcttccacggaagcagtgcaggccacgctggcggatacggaggtgcc
cctggaagggacttccagagacagaactcgatgccgccgagaggcggcaccagtggtttc
ggtggaaggggtaaagattcatcatcatctcacgataataacaggggcggcgatcgtaaa
cctcgcgacgacggcggcggtcgcggaaccgaccgcggagatcggagtgcccgaactggt
cgagatgaccgcgctggcggcgctggcgagaggaacgatcgcggagataacaggcgccag
caggcggcagctggaggtggcggagccgatcaccaccgtaggcaagacggcagcggtggc
atcaatggcagcgctggaagtggcggcggtggtggaggaggaggcagcggtgggcaacgc
agggagcgcggagacaggccagaccgagcacagcatcagcagggcgctgggcagcaggac
atcaactcgacaggacctaacggaggacaacatcctaatgcacgcaggtacgacagcagt
aagcacttcacgatgggtaaccctacgcacaatagccatcactacagccagcaccatcac
cagccgccgacgcaccgtgtgggtggagctggcgctgccacaacccccggcgggatcatt
ggtcaaaacagctttgggggtgccgtcgctcagaatggtttcagcgaagctgctcaaaac
ggttttgcgccaacgagtgctatcagcagcttaaacggcatgacccatcaaggtgccgtg
tctggacctcagccaagttctacacaggccggggggcaaggcttagtaacctcgcagaac
gcctctctgggaggtggcggcggccgtatgacacattggaccaatgtaccgagtgcggtt
ggggcagcgccagccagtttgggcggcaccacggtgggcggttctagtgcgttgaacggt
ggtttgggcgctggtctcggcggtggaattggtggccggactagtaacagtttcgttgtt
ggctcgccatcaccgcattcgcctcagggccctcactatgcagcttcgcccctcagtcat
gccagtttccaagctgctcagaactacggtggaccgactggttcaccaggacaaatctca
gctccgttcggccactacccggttccgcagtaccagagccctccctactaccagggactg
aaacgagaatgcgaaggtaacgagatgacaagtagatggaatgggaagtacttgatacac
cgtatcgatgtgtaa
DBGET
integrated database retrieval system
