Varroa jacobsoni: 111265346
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Entry
111265346 CDS
T07417
Name
(RefSeq) glutamate receptor ionotropic, kainate 2-like isoform X1
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vja04040
]
111265346
Ion channels [BR:
vja04040
]
Ligand-gated channels
Glutamate (ionotropic)
111265346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
Citrus_P18
crAss_CARGO2
TFIIA
Motif
Other DBs
NCBI-GeneID:
111265346
NCBI-ProteinID:
XP_022697676
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MRWIAFVLVLCTTVLVQAGDLPVMKIGALLDEDEQVASGALMDTLVARINADHKILPRFR
LHVVRVKVTNSFAAAKATCALIDDGCVALIGPTQHESHRMAQEIAARLQVPFFARGRPGA
SVGMTGASPAGRDNSGPSSSCSTCFDLLPPSRALSRAFADILKAKKWKNYALIYEKNQDL
VELAELIKNKNILLYQYQRGERGTKRLIREIGSDPQYNYIVQLPADRANDFFRLAGIVGL
LSEYFSYFVTAQDFHTWQLPAEALSNITALQLLHQEFVSLPSDSNGKRQRGGPKQQQFIH
QHQASQQQQFQQQQQAQQQLQTPPAPLKYHTALLHDYIFVFARAVGTLSRTQNMAPVSDA
SCHKPRNGWPMGLTIATQIKATSMQGLFGNIQFDTFGARSNFSAFVTEHKHGTIVKVGTW
APSSGFSMTRNVSWDRVHAEHSLRSRPLRVVTLLSPPFVMWRQQQNSAKSERNGDLEGFC
IDLLNELSRMLQLKFDIRLVNDSQHGSRDRQGNWNGLIKDILDMEADVALADLTVNVERA
RVVSFTTPFLPSQLELLYRPPSTAGDLVSLVKELFSPLSQEVWLSGVACVFMATFAMSYA
SKFSPRDRVRRSSSKQANIQTWTKPRFSFGDIFHLVACCALRQPPISKRPRGVATRFLTS
VLCFTSFVFWSVYTARLTAQFVQRRMHFDELHDAGDLLRVKGIRFGYVANTSSQLFLQGA
NYEPFSTIWSLIMGAGDISTLPSLEEGLRLVQAGGYAMFTETPAAEYHQCSISDCSVLRL
ATGIETPGYALALPRASPYTELFSQSVQKLREKEVISRLQRKWFLTPHSLVGAPHPFCRS
EIYRWGQLTAPGFATGPFILLGAGALVAALLALIECCCIANARRKRSRKQSSNSVANKKP
KGQITSITPIMCSPDSAHQQTCEPKPLPRDGPDDNTQIVAAVTTLLAVPSATGPIPPMPP
APSEDNIEMMRQCRTLDLHALPNILPPATMDLYNNINTMPISATTAESVILTGGVPATR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggattgcattcgtcctcgttctttgcacgacggtgctcgttcaggccggagac
ctgccggtcatgaaaatcggcgctctgttagatgaggacgaacaagtagcttccggagca
ctaatggatacactggtagcccgaatcaacgctgaccataaaatactgccccgatttcga
ctacatgttgtccgcgtaaaggtcacaaattcttttgctgcggctaaagccacatgcgca
ctgattgatgacggttgtgtcgcactcattggaccgacgcaacatgagtcgcacagaatg
gctcaagagattgcggcacgtcttcaggtgcctttttttgcgcgcggtcggcctggggca
tcggtcggcatgacaggggcgtctccagcaggtcgagacaactccggaccatcctcttct
tgttctacttgcttcgatctgctaccgccatcacgagcgctcagccgggccttcgccgat
atcctcaaagctaagaaatggaaaaactacgctctgatttacgagaaaaatcaagacctt
gtcgagcttgcggagcttattaaaaataaaaatattctgctttatcaataccaacgcgga
gaacggggcacgaaaagactcattcgcgaaatcggcagtgacccgcaatacaactacatc
gttcagttgcccgccgatcgcgctaacgacttcttccgtcttgcgggtattgttggtttg
ttatctgaatactttagctacttcgtcactgcgcaggactttcatacgtggcaactacca
gccgaagcactgagcaatatcacagcgctccagctcctccaccaggagtttgtttcacta
ccgtcggatagcaacggaaagcgtcaacgaggcggccctaaacaacaacagtttattcac
caacatcaagcatcgcaacaacagcagttccaacaacaacaacaggcccagcagcagctt
caaactccccctgccccacttaagtatcacaccgcgttgctgcacgactatatcttcgtg
tttgcgcgtgcagtcggaacactttcacgtacgcaaaatatggctcccgtttccgacgcg
agttgtcacaagccaaggaacggctggccgatgggtctgacaattgctacgcagatcaag
gcaacatcgatgcaaggactatttggaaatattcagttcgatacatttggagcgagatcg
aatttcagcgccttcgtgacggaacacaaacatggcacgattgttaaggtgggaacatgg
gcgccctcatcgggctttagcatgacaaggaacgtatcttgggaccgagtccacgcggag
cattcgttgcggagccggcctctccgcgtcgtgacgctcctcagtcctccgtttgtgatg
tggcgccaacagcagaattcagcaaaatccgaacgaaacggcgatttggaggggttctgt
atcgacctgctgaatgaactttcccgaatgcttcagctcaagtttgatattcggcttgtc
aacgattcgcaacacggtagtcgagatcgccagggtaactggaatggcctcattaaggac
attctcgatatggaggctgacgtagcgctagctgacctcacggtgaacgtcgaaagggcg
cgggtcgtttccttcacgacaccgtttttgccctcacaactggagctgctttaccggccg
ccttcaacagcgggcgatctcgtttctttggtcaaagagctcttttcgccactatctcag
gaggtttggctatctggtgtagcgtgcgtgttcatggctacatttgccatgtcatacgca
tcaaagttcagtcctcgggatagggtccgccgaagctcttcgaaacaggcaaacatccag
acctggacaaaaccaagattttcgtttggagacatctttcatcttgttgcttgctgtgct
ctgaggcaaccgccaataagcaaacgtccacgtggcgtagccacacgtttccttacgtcc
gtgctttgttttacatcgttcgtcttttggtcggtgtatacagcgagactaacagcacaa
ttcgtgcagcgtaggatgcatttcgacgaattgcacgacgctggtgaccttcttagagta
aaaggcattcgttttggatacgtggccaacacttcttcccagctttttctccagggcgcc
aattatgaaccgttctcgacaatctggtcgttgattatgggtgcaggagacatttcgaca
ctgccatcacttgaagaaggacttcgtctggtgcaagccggtggttatgccatgtttaca
gaaacaccagcagctgaataccatcagtgttctattagcgattgttctgtgcttcgtctg
gccacaggcatcgaaacacctggatatgctctggctttgccaagagcgtccccctacacg
gagttattttcgcaaagcgtacagaaactgcgggagaaggaggtgatctcccggttacaa
cgcaagtggtttctaactccgcacagtttagtcggagcaccgcacccattctgtaggtca
gagatttaccgatggggccaactaaccgcccctggcttcgcaacggggccatttattctt
ctaggagcaggtgccctcgttgctgcattacttgctcttatcgagtgttgttgtatcgca
aatgcgcgaaggaaacgatcccgcaaacagtcgagcaacagtgttgcaaacaaaaagccc
aaaggtcagattacatcgataactcccattatgtgttctcctgactctgcacatcagcaa
acctgtgagccgaaaccacttcctagggacggcccggacgataacacccagattgtagct
gcagtaaccacattgttggccgtgccttcggcaacaggtccgataccccctatgccgccg
gcgccttccgaggataacatcgaaatgatgcggcaatgtcgcacgttagacctgcatgca
ttacctaatattctgccaccggccacaatggacctttacaataatatcaacactatgcct
atcagcgccaccacggctgagtcggtgattctgacgggcggtgttcccgcaacaaggtag
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