Varroa jacobsoni: 111265511
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Entry
111265511 CDS
T07417
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vja03000
]
111265511
03036 Chromosome and associated proteins [BR:
vja03036
]
111265511
Transcription factors [BR:
vja03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111265511
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111265511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
T3SS_needle_reg
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
111265511
NCBI-ProteinID:
XP_022697993
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MSSTSDEDELVQNANGDTEGLSGSLKVPLLQYSSVILPATRVTPAFLEQHQAVCTACRTR
VPHLRTRRLRVHPTLCTIVCRKCEEKLIAIFKSTTGIDGRRCHWCVTPILQEPSNSASAV
LAEKGGARCNNVQCGQFVCRSCLKQNLTRDQLHAVRVSQEKGEWKCFRCNPQLIRPHQLY
AATVAEYVRVRRRPVLLASPATNNDEVHQNLTDTKTNTFYGLCQQEVEKLSSSARSLVEA
CALYTTRQDGQSSLINQLEEHILLAGRFLKLQSNHDKSPQGNVSSATGDATFTDAPMGSI
LPVLDYDEKNVLIDVIRQQNEARKGQQSDEQRFQKLVHPENFNDQSTPVGENTAGPGDTS
LVSSESALETTENTKGTLNTPASTALENILAPSNIKNEIDPDEIVYDEVASASPKSIKEK
VSNDNHCLPVNTIDFDNDSKDSNATVDLPLVPNKRFNKQRLSNSSKIDENIQGTAHSDND
EDCELQSLLADIEPRRIVQHQHNGKKKPGPSGNDTNGDLKPKSSDAKVKKEMSGISKSRA
PFASSDEEAGGVGGLNLSQPCDYGPIIVLSECEGLSDLMSDEDDDEDDDMEIYVEEDESQ
DSHEHSHSNRSLSVSEHNTREDTDGDVMQVVDERDDKQDRGPHTEGSNVLSNKANGTQNK
KVLLKRLIPSMPMADTDASNSEDEEKSGACARLMKPRRKLSNVKRRLSQISSSEDDSSSN
EWKRPRIGSDNQLELSSTRTANLDLGSEISGNPMSRTNDNPSGSTDVRPGDPVKSATVSK
TKLPQDVLVVMDSDDDVIVSKEEMGHGKQKKVATSVPPVKKFSKQAIKAEFDPCVISSDD
DEPATQRLTFPSVSNGIQSKGEIPAPGSAPTGRRNIREVMDENKLSGSTREANAAERERR
QRIEELQNKYNQFERSFEQMAGPDGGKCVLEYDMTTKKPLVEVHPSLARRLKKHQSEGIK
FLYRNLIETVSRLKCKEACTGAILAHCMGLGKTFQVICLVHTLLTHPLLKEHFKTVLVVC
PLNVVNAWRCEIEQWIKRDDTIQEKFMLYNLHHEKDQILRESLMSKWTRSGGVLLITPNL
LTVLLGAETEAGQRKRQRLLKLNKNNAARVKPNSASMNKMKSFLWDPGASVVVVDEGHTL
KNSDTQVTQVVQMMKTRRKILLTGTPLQNNLVEYYTMVSLVSPDLLGTKQEFKNRFENPI
SNGQYKNSTVEDIQKMRRRASVLNKLLNNVVQRRDMSVLASILPPRQDYVLTIRLSPLQE
RLYSEFLGMLIKRAEEQPNNNGPTFKRLLQDFVLLRSTWTHPKLLVMPRKTCPKKQKVAT
LVDMLVFDSITPEQDAQLTQKDWYRPHLEGTDLDDIALGPKLFILFDIIQQCTLIEDKLV
VFCTQLSALDLIEYLLRLMHENRIGGHSWVKNKDFFRMDGTTTAEDRQRFFGMFNDPDKP
WARLFLVSTNAGKLGSTLIGANRMVLLDTSWNPSDDNQAVYRIYRIGQIKPVYIYRFVSF
GTMEEKIYARNILKESTQHRVLDDSNMERHFTHEDVRDLYLFTPYEESEKVLPPVPKDRL
LAELILRQKDNIVKVHEHQQMLQNLEDDLSEEDRRIAWEEYQREKDAPPGQQGAQESAGD
TAFSKPPALLVVADQLLGQVAQFSAIFNNPNVPEEDKRKMIGQYLKKTKQARDKYEQVTK
IDHQMLTECIRLKHPLEVTNKIVSRRQIVNSKIELLNEELRQINDFIKRLQQTPIRRALS
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctacatcagatgaggatgaattggttcaaaacgcgaatggagatactgaagga
cttagtggaagcttgaaagtacctttactacagtactcctcggtgattttacctgcgact
cgtgtaactcctgcttttctagagcaacaccaggcagtttgtacagcttgccgtactcgg
gtgccgcatttacggacaagaagattacgtgttcatcccacgttatgcacaattgtctgc
cgaaaatgtgaggagaaactgatagcgatttttaaatcaacgactggaatcgatggtcgt
cggtgccattggtgcgtcacgcccattttacaggaaccgtcaaatagcgcatccgctgtc
ttggcggaaaagggtggtgcgcgatgcaataacgtccaatgtggacaatttgtgtgccga
tcctgtctgaaacaaaacctaacgcgtgaccaactacatgctgtacgtgtttctcaggag
aaaggcgaatggaaatgctttcgctgtaatcctcagttgattcggcctcatcagttatat
gcggcaacggtagcggaatatgtgcgtgtgcgtcgtaggcccgtccttttggcatcacca
gcaactaataacgacgaggtacaccaaaacctaacagatactaaaacaaacactttttat
ggtctatgccagcaagaagttgaaaagctgagcagcagtgcacgatctctggtcgaggcc
tgtgcgttgtacacaaccagacaggatggacagagcagcttaataaatcaactcgaggag
cacatcttgttggcgggacgctttttgaagctccaatcaaaccacgataaatcaccgcaa
ggaaacgtgtcatctgctacaggcgacgctaccttcaccgacgctccgatgggcagtata
cttcctgtactggactacgacgagaagaatgtgctgattgatgtgatccgccagcaaaat
gaggcacgaaagggccagcagtcggatgaacagcgatttcagaaacttgttcaccccgaa
aattttaacgatcaaagtacgcctgtcggagaaaacacggcgggtcctggtgacacttct
ttggtttcatcggagtcagcgttagaaactacggaaaatacaaaaggcacattgaataca
ccggcgtctacagctttagaaaatattttagctccaagtaacataaaaaatgagatagac
ccagatgaaatcgtttatgacgaagtagcgtcagcgtctcccaaaagcattaaagagaag
gtttcaaacgataatcattgcttgccagtcaacactatagatttcgataatgattctaag
gattccaatgccaccgtagatctcccgcttgtgccgaataaaaggtttaataaacagagg
ttgtcaaattcgtcaaagatagacgaaaatatacagggtacagcccattcggataatgat
gaggattgcgagcttcagtcacttctagctgacatcgaaccgagaaggattgtacaacac
caacataacggtaagaagaaaccgggacccagtggcaatgacacaaatggcgatcttaaa
ccaaaatcatctgacgccaaggtgaagaaggaaatgtcaggtatctcaaaaagccgtgct
ccgttcgcttcgtccgatgaagaagcgggaggcgttggtggtctgaacttgtcacaaccg
tgcgactacggaccaattatcgttctttcggagtgtgaaggcttgtcggatcttatgagt
gacgaagacgatgatgaagatgatgacatggaaatttacgttgaagaagatgagagtcaa
gattcacatgagcatagccatagtaatagatcactttcagtctctgagcacaacactcgt
gaagatacggatggtgatgtgatgcaagtcgtcgatgagagggacgataaacaagataga
gggcctcatacggaaggcagcaatgtattgagcaacaaagctaatggtactcagaacaag
aaagttttgctgaagcgtttgatcccaagtatgcctatggcggatacggatgccagtaac
tctgaagatgaggaaaagagcggagcttgtgcaaggctaatgaaaccgagaaggaagcta
tccaatgttaaaagacgactgtcgcagattagctcatcggaagacgactccagtagcaat
gagtggaagcgaccgagaatcgggtcggataaccagttagagctctcatctactcggaca
gcaaatttagatctgggcagtgaaataagcggaaatcctatgtctagaactaatgacaat
ccatctggtagtacggatgttcgtcccggtgatccggtgaagtcagctactgtgtcgaaa
acaaaattgccccaagatgttttggttgtaatggactccgacgatgatgtcatcgtttcg
aaggaagaaatgggccatggaaagcaaaaaaaagtggccacttccgtgcctcctgtcaag
aagttttcaaaacaagcaattaaggcagagtttgacccatgtgtgatttccagtgatgac
gatgagcctgctacacagcggctcacgtttccgtccgtatcaaacggtatacagtcaaaa
ggagagatccctgcacctggaagtgcaccgacaggtagacgcaacattcgagaggtgatg
gatgaaaacaaactgtcaggatcgacacgcgaggctaatgccgccgaacgcgaacgtcgt
caacggatcgaggagctacaaaacaagtataaccaatttgagcggagctttgaacagatg
gctggcccagatggtggcaagtgtgtcttggaatacgatatgacaactaagaagccgctg
gttgaagtacatccgagtttagctcgccgtcttaaaaaacaccaaagcgaagggattaaa
ttcctgtatcgtaatcttatcgaaacggtatctcgactcaaatgcaaagaagcgtgtacc
ggtgccattctagcacattgtatgggtcttggtaagacttttcaggtcatttgtcttgtg
cataccttactcacccacccattattaaaagaacacttcaagacagttttagtcgtatgt
ccgctaaacgttgtcaacgcgtggcgttgcgaaatcgaacagtggattaagcgagatgac
acaattcaggaaaagttcatgctatataatctacatcatgaaaaggaccaaatcttgcgc
gaatctttaatgagtaaatggacccgttcaggtggggttttactgataacaccaaacctg
cttactgttctgcttggcgcggaaacggaggcgggacaaaggaaacgccaaaggctgctg
aaattaaacaaaaataacgcggcgcgagttaaacccaactctgctagcatgaacaagatg
aaaagcttcctctgggatcccggcgcatctgtggtcgttgtcgacgagggtcacacgctt
aaaaatagcgacacgcaagtaacgcaggtagtccagatgatgaaaacacgaagaaaaatt
ctcctcactggcacaccgctacaaaacaatcttgtagagtactacacgatggtttcgttg
gtttctccagatctccttggaacgaagcaagaattcaagaaccgtttcgaaaatccgata
tcgaatgggcaatacaaaaactcaactgtcgaagatattcaaaaaatgcggagacgcgcc
agtgtcctcaataagttacttaataatgttgtccagaggagagatatgtctgtgttggca
agcatcttaccgcctcggcaagattacgtcctcacaattcgactttcaccgctgcaagag
cgactttacagtgaatttctaggcatgctaattaagcgcgcagaggaacagccaaacaac
aatggcccgacttttaagcgtcttctgcaagattttgtattgcttagatcaacatggacc
catccgaagctattggtgatgccacgaaaaacctgtccaaaaaagcaaaaggtagcaacc
ttagttgatatgctggtctttgattcgatcacacctgagcaggatgcacagcttacgcag
aaagactggtatagaccgcatctggaaggaacggatttggatgatatcgcactcggtcct
aaactcttcatattgttcgacattattcaacaatgcacactcatcgaggacaaactcgtc
gtgttttgtacccagctcagtgctcttgaccttattgaatatcttcttcgactgatgcac
gagaatcgcattggaggacacagttgggttaagaacaaagatttcttccgcatggatggt
acgactactgcggaagatcgtcagagattctttgggatgtttaacgaccctgataaacca
tgggcgcgattatttttggttagcactaacgccggtaaacttggttcaacccttatcgga
gccaatagaatggtgcttcttgacacaagctggaatccatcagacgataaccaagccgta
tatagaatataccgtattgggcagataaaacctgtctatatttaccggttcgtttcattt
ggaaccatggaagagaaaatttacgcccgcaatatacttaaggagagtacgcaacatcgc
gttttagatgattcaaatatggagcgacattttacgcatgaggacgtgcgtgatctctac
ctctttactccatatgaagagtctgaaaaagtcctacctcccgtaccgaaggatcgtctc
ttggctgaattaattctacgacagaaagacaacattgtgaaagtacacgaacaccaacaa
atgctacaaaatcttgaggatgatctttcggaagaggaccgtcgcatagcatgggaagaa
taccagagagaaaaagacgctcctcctggtcagcaaggagcacaggaaagtgctggtgat
acagcattttccaaaccaccagcattattagtcgtcgcagatcagctgcttggacaagta
gcacaatttagtgctatttttaataatccaaacgtacccgaagaagacaaacggaagatg
ataggacaatacctaaaaaaaacgaagcaggcgagagacaaatatgagcaagtaaccaag
atagaccatcaaatgttgaccgaatgtattcgtctgaaacatccgcttgaagtaactaac
aaaatcgtgagccggaggcagattgtcaactccaaaattgagctgcttaatgaagaactt
cgacagatcaacgatttcatcaaaaggcttcagcagactccgattagacgcgcgctgtcg
taa
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integrated database retrieval system
