Varroa jacobsoni: 111265640
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Entry
111265640 CDS
T07417
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
vja
Varroa jacobsoni
Pathway
vja04080
Neuroactive ligand-receptor interaction
vja04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111265640
04082 Neuroactive ligand signaling
111265640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vja04040
]
111265640
Ion channels [BR:
vja04040
]
Ligand-gated channels
GABA-A
111265640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
VPS13_N
DUF702
DDHD
MAML1_3_TAD1
Motif
Other DBs
NCBI-GeneID:
111265640
NCBI-ProteinID:
XP_022698220
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MAEFTRSFRGCIKRRATSAWFLVAFTMVFYCLRAVQTERVLLHQMASGSSGLRPGQTQRG
QNITHILNAFFTKGYDKRVRPNYGGNPVEVGVSMQIVSISTVSEVQMDFTSDFYFRQAWR
DERLSFVKSPDLDQMTVGAEVANKIWVPDTFFANEKTAYFHVATTPNTFLRISSEGQVYR
SIRLTVTASCPMDLRFFPMDRQSCTIEVESFGYTMSDIRYKWKDGPNSIGISKEVELPQF
KVLGHVQKISEVSLSTGNYSRLICEVRFVRSMGYYLIQIYIPASLIVVISWVSFWLHRNA
TPARVSLGVMTVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVFASLLEYAAVGYLG
KRVAMRKSRAQQLAKLAEQARQERARQAAAQEAAQSQHPEPPMPPMPTSGLGGIMGPQSP
DQGMLPPLVKGFGGGCPTCPTMMQSQPQHMPPCFTMTLYDNQLRRIGDQCCPGVRGCTIC
STQQQQQQQQQQQQQQQQQQQQHSLKKSDSKSSRKESTAQTPEAASAPGGAGSPAEIEAA
LAGKNPNKLFGVNPSNIDKYSRVVFPVCFVCFNLTYWVIYLRISDVQYDEPTILH
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggaattcactaggagcttcaggggctgcattaagcggagggcaacttccgcctgg
tttctagtggcgttcacaatggtcttctactgcctcagggcagttcagactgagagggtc
ctcctccaccagatggcatccggcagcagcggtctaagaccgggtcaaacgcagcgcggt
caaaatatcacgcacatactcaatgcctttttcaccaaaggatatgacaagcgagttcga
cccaattatggagggaatcccgtggaagttggtgtcagtatgcagatcgtcagtatcagt
accgtatcagaagtgcagatggacttcacgtcggatttctactttcgacaagcctggaga
gacgaacgtctctctttcgtcaagagtcccgacctagaccagatgacggtcggagcagaa
gtggccaacaagatctgggtgccagatacgttttttgctaatgagaagactgcctatttt
catgtggctacgacgcccaacactttccttcgaattagctcggaaggacaggtctacaga
agtattcgattgacagtgacagccagctgtccgatggatcttcgattcttcccaatggac
agacaatcatgtactattgaagtcgaaagtttcggctatacaatgagcgatatccgctac
aaatggaaggacggacccaactcgattggaatatcgaaagaagtcgagctccctcaattc
aaggtgctcggccacgtgcagaaaatctctgaggtgtcattgtcgacgggcaactattca
cgtctaatctgtgaagtccgctttgtgaggtccatgggctactacctcattcagatctac
atcccagcctcactcattgtcgtcatctcgtgggtgtccttctggctgcaccgaaacgca
accccggcacgggtgtctctgggagtgatgaccgtgctgacaatgaccaccctaatgtcc
agcactaactcccaattgcccaaaatatcctacgtcaaatccatcgacgttttcctagga
acatgcttcgtcatggtgttcgcgtcccttttagaatatgcagccgtgggttacttgggc
aaacgcgtggcgatgagaaagtcacgcgcgcagcagctggccaaactggcagaacaggcg
cgacaagaacgagcgcgtcaagctgcggcccaagaggccgcccagagccagcacccagaa
ccgccaatgccacctatgccaacgagtggtctcggtgggataatgggtcctcaaagcccc
gatcagggaatgctgccgcccctcgttaaaggttttggtgggggctgcccaacttgcccc
acaatgatgcagagccaaccacagcatatgccaccatgcttcacgatgacgctgtacgat
aatcaactccggcggatcggcgatcagtgctgccctggagttcggggttgtaccatctgc
tcgactcagcaacagcagcaacagcagcaacaacaacaacagcaacagcagcagcagcag
cagcagcactcgttgaagaagtcggactcgaagagctcgcgcaaggagtcgacggcgcag
actcctgaggcggcctcggcgccgggcggcgccggcagcccggccgaaatcgaggccgcg
ctcgccggcaaaaacccgaataagctcttcggggtgaacccttctaacatcgataagtac
tcgcgcgtcgtgtttcccgtctgcttcgtgtgtttcaatctcacgtattgggtgatctat
ctgaggatctccgacgtgcagtacgacgaaccaactatccttcactga
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