Varroa jacobsoni: 111265764
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Entry
111265764 CDS
T07417
Name
(RefSeq) nuclear pore complex protein Nup88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111265764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111265764
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111265764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
111265764
NCBI-ProteinID:
XP_022698410
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSSPSARDSSNDGGNFSGGAKWHSPDSPFLRMMGKVAECSSPKQLLAFCNDLLIGWSEQN
RCLCAVDIDNGDKEDRCYELSLSHKVTFSVDRLCPSPTGNLLLWGANGAVVVALPHHDNF
RNATGDAPLQCKSWGIGELLLMQTAGLEVLGLQWVPDSASEVVMLTSDNCLRLFDISKKH
MNALTTVQVIRRSLSLSRMNFSIASATGSQLVDFAFGRSAQEIFCLSASGSIYHVTGLES
TANSKPRVSKRPLVMLPEAEDNFGSDGFALLSLNCNPADSTILILGGTGGVLYHCLVLPT
ESPDVEPEIYIFEQLRLNLTYSEMTDPNDVIRCPILLQRDPALSNRYFAHHDSGVHVVII
PFTERLFTFAQQGDTDTSTNVLEVRNCINSASPNSLAEQVVCTRTTEASAPDAPLGLCVL
PALPSPWLAILTSGLKVVNIPLSRYRFEKSLKNILLTEEPLSESAKSGIPPTDFEREIKM
ILTGSRVPVLVQADKVTSPKELLELALQTTQRFREQHFAQLIAVKKLIEDTSQSLRETKD
LQSGELRQLEQDLNDVTVQNQKLNQKLSACEEQKRKLMLRLHDVIQMVQRKNPSAANPQM
VKEVQSLYERMNRLESVLESTKERRKNCEDLEQFERILKQESMSARDAFAALGESQRVAL
ESRLKINGHEIGKMVREVKELLADVE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccttcagctcgtgatagttccaatgatggtggcaatttttctggtggagct
aaatggcactcgccagattcgccttttcttcgcatgatgggaaaagtggctgagtgcagc
tcaccgaaacagttgctcgcgttctgtaatgaccttctgattggatggagcgagcagaat
cgctgcctctgtgctgttgatatcgacaatggcgacaaagaggaccgatgttatgaacta
tctcttagccacaaagtgacgttctctgttgatcgtctctgcccatcaccgactgggaat
cttcttctatggggcgccaatggcgccgtcgtcgtagcacttcctcaccatgataacttc
agaaacgccacaggggatgccccactacaatgcaagagttggggtataggagaattattg
ctaatgcagacagcaggcctcgaggtgttaggcctccagtgggttccggactctgccagt
gaagtagtgatgctaacgagtgacaattgccttcggctatttgatatctcgaaaaagcac
atgaatgcactaacaacggtacaagtcatccgacggtcgctatcgttgtcacgaatgaac
tttagcattgcgtcggctacaggctctcagttagtggactttgcatttggcagatctgca
caagaaatattttgtctgagcgcttcgggatcgatttatcatgtcaccggactggaatcg
acagcaaacagtaagcctcgagtatcgaaaagacctttagtaatgttgcctgaagccgag
gataatttcggctcggatggatttgctcttctatcactcaactgcaatccggctgactct
acaattctaattttgggaggcacaggcggagtcctgtaccattgtcttgttcttcccaca
gaaagccccgatgtggaacctgaaatatacatttttgaacagctaaggttgaacttgaca
tactccgaaatgacggatccgaacgatgtcatccgctgtccaattcttttgcaacgggat
cccgctctgtccaatcgttacttcgcccaccacgattccggtgtacatgttgtaatcatt
ccattcactgagcgcctattcacatttgcccagcagggagacacggatacctcaacgaac
gtacttgaagttagaaactgtataaacagcgcgagccccaattcgttagcggaacaggtt
gtttgcacgcggacgactgaagcatctgcgccagatgcacctctgggtctatgcgttctg
cccgccttgccgtcaccgtggttagctatacttacatcaggtctcaaggtcgtcaatatt
ccactaagcaggtatcgattcgagaaatcattaaagaatattttgttaactgaagaacct
ctttcggaaagcgcgaagagtggaataccaccgacagacttcgaaagagaaattaaaatg
attctcacagggtcacgggtaccggtgctagttcaagcggacaaggtaaccagtcctaaa
gaattacttgaattagctctccagacaacgcagcgatttcgggaacaacattttgctcaa
ttaatagctgtaaaaaagcttatcgaggacacgagtcaatcgttgcgtgaaacaaaggac
ttgcaatctggggagctgagacagttggaacaagacttgaatgacgttaccgttcagaac
cagaaactaaatcaaaaacttagcgcatgcgaagaacagaaacgcaagcttatgctaaga
ttgcatgacgtcatacagatggtacaacgtaaaaatccatccgcagccaacccgcaaatg
gtgaaagaagttcagtccctctacgaaagaatgaatcgacttgaaagcgttctcgagtcg
accaaagagcgtagaaagaactgtgaagatcttgagcagttcgagcgtatactcaaacag
gagtcaatgagtgcccgggatgcttttgcagctttgggtgaaagtcaacgggtcgcgttg
gaaagtagacttaaaatcaatggacacgaaattggcaagatggtccgtgaagtcaaggag
cttctcgccgacgttgaataa
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