Varroa jacobsoni: 111266357
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Entry
111266357 CDS
T07417
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vja03036
]
111266357
03400 DNA repair and recombination proteins [BR:
vja03400
]
111266357
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
111266357
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
111266357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_2
Cnd1
Motif
Other DBs
NCBI-GeneID:
111266357
NCBI-ProteinID:
XP_022699532
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MASTQMRIVYPPGVKDIYAELPEDDLARRLKECAQAFQNLNQEDDNSRYSELALHLASEF
FLEHHSRDVRLLVACCIADVFRVFAPEAPYKDPEQLRAIFEFFIQQLQGLKDPKNPTFKR
YFYLLENLAWVKTFNICLDLECNQTIICNLYTLILGIVNDYHSAKVRSFMVEMLCPLINE
ADGVSQKLLDTLLAYIVPPKKSSHKVASQLSREILKKTSSALEQHLHLFFNNYLVLGKTG
GSTLIPSMYDIIYELSHILPQAMAGVLPQLEMKLKCKENNERLEVTKLVARMFSEKNSEL
AGQYPALWNALVGRFNDIKLQVRMRCVQYSMHFLLNQPSLRNDITQALKTRQHDPNESVR
FEVVMAIVEAAKKNFESVSIELLNIVKERTLDKNFKVRREALLGLAHIYKNLTCGSHETE
DPNIVACVAWIKDKVLHVYYQSELEDRLIVERILHTCLVPYQLSYDLRTFKLYQLFVTCD
EHAVKALIEILKCQCAIRQQIKQVVHLLGSGPMDSEKQEELMKRVQHMSRNLPEPVRAQE
YLVRFTDLLRVNPAIYQHMVLILDGGASCAEAEKSVKEVLKSLGLPVQTNSFFVTIKQML
ERVAPVVVDSAGIKQILGYVQDSLQGTGEIDIQCNVPQSAYRGLELLHTLSGVFPNAFMN
EEIFETIYHFLGFDCSRTQVQVLLVLSNVGKDLETHFPNIAQRLQPVVQNFVENGTPKQA
KYAVQCLYNMVFHKERVLGVVIDHLKQHLTLASANFETALVSLGHIALLLPETFYQQMKS
VVSKVVVKELLMLDQEEARMSELQWCEYEALPHETRCKLAGIKMIGRWLVGLSNMHQAQQ
QGNSQLPEQETEVEQSTQALTANAASTLRLLITMLKNQGDLMEREHVSDCEKSYLRLWAA
AAILKVCSCTVYADVITQPQFQRLVGVITDPVDEVRERFSAKLHKRLMSLQLPLQFMALL
SYGGIEQRRPLKAKMRHYLLANIQRRREYLKANPIAASPKLLTVLPDYVVVYVIHLMAHD
PLYEEPADVEALNRIKECLWFQLEPHCSKNDNYSFSYFKKLLEGIKRSKDRQNPTNEAAN
HRLYAVCDLTLALIMSKTANFGLREVPQEARLPAKLFVLPDKSTPYNTKYYLPPELGFAP
PRKIQDTSNRMVATSAVTASGVGSKKDTQQHQQQQQATAVATRAAVAAATTVTQQQSGSG
VGLEATLDGNQVNIIGQQPGGTLMQLQQVTVPTEVALQSMAQGQVATIQMQTSQSTPTGG
TKRSLDASSMVPLQQMQGSASILITTDGSHQQIAQVEQQQQLHHHLQVTTIQVDQQQASG
NMHLLTPDGASSVKRLCVEATTGGISQIQPSVQDNNSANQIDQSHQVGKRMTRSSHVQ
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggctagcactcagatgaggattgtctacccgccgggcgttaaagatatctatgccgag
cttccggaagatgacttggcaaggagactgaaggagtgcgctcaagccttccagaacctg
aatcaagaagacgacaactcgcggtactctgaactggcactgcatcttgcttccgagttc
ttccttgaacatcattccagagatgtacggttgctcgttgcctgttgcattgccgatgtc
ttcagggtttttgcacccgaggctccttataaggacccggaacagctgcgggccatcttt
gaatttttcattcaacaactccaaggtcttaaggatccgaagaatccaacatttaaacgt
tacttctatttattggagaacctcgcttgggtgaaaacgtttaatatttgtcttgatctc
gaatgcaatcagaccattatctgtaacctctacacactcatccttggcatcgtcaacgat
taccacagcgcaaaggttcgctcgttcatggtggaaatgttatgcccactgatcaacgag
gctgacggagtttcgcagaagctgcttgacacactgcttgcctacattgttccacccaaa
aagtcgtctcataaggtagcatcgcaactgtcacgtgaaattcttaagaaaacatcatcg
gccctcgaacagcacctgcatctgttctttaacaactatttagtcctgggcaaaactggt
ggttcaactctcattccgtcgatgtatgacattatctacgagctgtcacatatcctaccg
caggccatggcaggagttctacctcagctcgaaatgaaactcaagtgcaaagagaataat
gagagactagaggttaccaagctggtcgcgcgaatgttctcggaaaaaaattcggaatta
gccggccagtaccccgctttgtggaacgctcttgtcggccgttttaatgatatcaaactg
caggttcgaatgcggtgcgtccagtattcaatgcacttcttattaaatcagccatctttg
agaaatgatatcacgcaggcgctgaaaacgagacagcatgatcccaacgaaagtgtcaga
tttgaggtcgtgatggcgattgtcgaggcagcgaaaaagaacttcgagtctgtcagtatt
gagcttctcaacatcgtcaaagaacgcaccctcgataaaaacttcaaagttcgacgggag
gcgctgttaggtttggcgcacatctataagaacctcacatgcggctcgcatgagacagaa
gaccccaatatcgttgcatgtgtggcctggatcaaagacaaggtgctgcacgtatattat
cagagtgagctggaagaccggctgattgttgaacgcatcctacacacttgccttgttccc
taccagttatcatatgatcttcgaacgtttaaactgtaccagctatttgtaacgtgtgat
gaacacgcggtaaaggcactcatcgaaattctgaaatgccaatgtgccattcggcaacaa
atcaaacaggttgttcacctgttgggttccggacccatggactcggagaagcaagaagaa
ttaatgaaacgggttcagcacatgtcgaggaatctacctgaaccagttcgagcacaagag
tacctggtaagattcacagaccttctccgggtgaaccctgctatatatcagcatatggtt
ctgattcttgatggcggggcaagttgtgccgaagcggaaaaaagtgtgaaagaggttctt
aagtcactcggcctgcccgtacagaccaactcgttctttgttacgatcaaacaaatgctg
gaacgggtggcgccagttgtcgttgattcagcaggaattaaacaaattttaggatacgtc
caggattcgttgcaagggacgggtgaaatagacatccagtgcaacgtgccacaatccgcg
tatcgtggcttggagttactccacactttgagtggagtgtttccaaacgcgtttatgaat
gaggaaatcttcgagacgatctatcattttcttgggttcgactgttctaggacacaggta
caagtactgctggtcttgtcgaatgtgggaaaagatctggagacgcatttccctaacatt
gcacagcgcctccagcccgttgtgcagaatttcgttgaaaacggcactccaaaacaagcg
aaatacgccgtgcaatgcctctacaacatggtgtttcacaaggagcgtgttctaggtgtg
gtaattgaccatttgaaacagcaccttaccttggcatcggccaatttcgaaacggccctt
gtatcccttgggcatattgcgttactcctacctgagacgttctaccagcaaatgaagagt
gtcgtctccaaagttgttgtaaaggaacttttgatgttggatcaagaggaagcacgcatg
agtgaacttcaatggtgcgaatatgaagcgctgccgcacgagacacgatgtaaactagct
ggcataaagatgataggacggtggcttgtcggcctgtccaacatgcatcaggcacaacag
cagggcaattcgcagttgccggagcaggaaacagaggtagagcaaagtactcaagctttg
acggccaacgcagcgagtacattgcgccttttgattacaatgttaaaaaatcagggcgac
ctgatggaacgagagcacgtgagcgactgcgagaaaagttatctccgtctatgggccgct
gcggcaattctaaaggtgtgctcgtgtacggtatatgcggatgttatcacgcaaccgcaa
ttccagcgacttgtaggggtcataacagatccggtggacgaagtccgtgaacgtttcagt
gcgaaactccataaacgcctgatgagtttgcagctgcctttacaatttatggctctgctc
tcctatggaggcatcgaacaacgtcgaccactcaaggcgaagatgcgacactatcttctt
gcaaacatccagcggcgacgggagtatctcaaggcaaatccaattgcggcttcaccaaag
ttgttgaccgttctgccagattacgtcgtagtgtatgtcatccacttgatggcacatgat
ccactgtacgaggaaccggctgatgtggaagcgcttaaccgtatcaaggaatgcctctgg
tttcagcttgagccgcactgctcaaaaaatgacaattactcattttcttactttaagaaa
ctgcttgaaggcatcaaacgttcgaaggatcggcaaaatccaacaaatgaagcagcaaat
catcgcctttatgctgtctgcgaccttacgctagctctcataatgagtaagactgcaaac
tttggccttcgagaagtgcctcaggaagctagactgccagcaaaactctttgtattacca
gataagagtactccatacaataccaaatactaccttcctcctgagctcggttttgctcct
ccgaggaaaattcaagacacatcgaatcgaatggtagcaacatccgcagtcactgctagt
ggggttggaagcaaaaaggatacgcagcagcatcaacagcagcaacaggcgacagctgtt
gcgacacgagcggctgtagccgcagccaccacagttacacaacaacagagtggaagtgga
gtcggacttgaagccacgttggatggaaatcaagtgaacatcatcggccaacagccgggc
ggcactctaatgcaacttcagcaagtgactgtaccgacagaagtagctctacaaagcatg
gcccagggtcaggtggcaaccatccaaatgcaaacctcccagtcgactcctactggcgga
accaagcgatcattggacgccagctcgatggtgccacttcaacagatgcaaggctcggcg
agtattctcatcaccaccgatggaagccatcagcagatcgcgcaggtggaacagcagcaa
caactccatcatcatcttcaagtaacgacgattcaggttgatcagcaacaagctagcgga
aacatgcaccttcttacgccggacggcgcttcgtccgtgaagcgattatgcgttgaagcg
accaccggtgggatctcccaaatacagccatctgtacaggacaataattctgccaatcag
atcgatcagtcgcatcaggtagggaaacgaatgacccgatcatcccacgtccagtga
DBGET
integrated database retrieval system
