Varroa jacobsoni: 111266813
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Entry
111266813 CDS
T07417
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
vja
Varroa jacobsoni
Pathway
vja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111266813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111266813
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111266813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111266813
NCBI-ProteinID:
XP_022700347
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MSAASTIPPGAGGGDEEAWLYESKETDVLPPGDDSSQEPGVPGEDSQEEQQVTLVEESHG
EKENGKSDKANKEDLEEGEDDDDDDDDDDDEDEIEVTIGDTKSAPVPPGGAASAVSSGIT
AGAPVNLNIKKSIGGGTTAVTGLGATGGQIVKQTHKGLDIDAVASINGTNIYEFNIDSLE
EKPWRKPGADITDYFNYGFTEETWKIYCDRQRRLRGDNNIQGVKSMVNQVPSTMGGPGGG
YEKYRPSYGGSRDPKESYGGGPRGIGGGSKRETGGTIDVIGANSNSRRPPQGPPPPLDDS
GPPPPMMGGPPNDIPSHFPGQFANVGHPMPPYDPHSMPPPPFDPRFPPPGGLIPSPLDGP
GIPPAPFDPYGAPLGLPPPPMPNMPPPIMPGPGDFRTSGAGGGGAGNNGAGGGDDSGRMS
SGPQAMDDLAAEYERRRHHRSRDERDDRDYREERERRHRERERERDSRDDRRDREDRRER
DRSDRDRDRSDRDRSDRDRDSDRHRSSRKSRRHDEEDDDRRSSKHKRSKRDDDS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgcgtcaacaattccgcctggagctggcggcggtgatgaagaagcttggctg
tacgagtcaaaagagacagatgttttaccgccgggcgatgattcttctcaagaaccaggc
gttcccggagaggattcgcaggaggaacagcaggtgacgctggtggaagagtctcatggc
gaaaaggagaacggcaaaagtgataaagcaaacaaagaggacctcgaggagggcgaagac
gacgacgacgatgatgatgatgatgatgacgaagatgagattgaggtcacaatcggtgac
acgaaatcggctccagttccaccagggggtgcggcaagcgctgtctccagcgggatcacc
gctggagcgcccgtcaatttaaacatcaaaaaaagtattggaggtggcactacagctgtc
actggtctgggggcaaccggtgggcaaattgtcaagcaaacgcacaaaggattagatatt
gatgcagttgcatctattaatggtacgaatatttacgagtttaatattgattcgcttgag
gagaagccgtggcgcaaaccgggagcagatattacggattatttcaattatggatttact
gaggaaacttggaagatttactgtgaccgacaacgaaggcttcggggtgacaataatata
cagggcgtaaagagtatggtgaatcaggtgccttctactatgggtgggccaggaggtggc
tatgagaaatatcgtccatcttatggcggttcgagggatccaaaggaatcgtacggtggc
ggtccacgaggtataggaggagggtcaaagcgagaaactgggggaaccatcgatgtgatc
ggagccaactcaaattcgcgccgaccaccccaggggccaccgccacctctcgacgactca
ggaccacctccaccgatgatgggcggtccaccaaatgacataccgtcacatttccccggg
cagtttgctaacgtcggccatccaatgcccccatacgatccacactcgatgccgcctcct
ccgtttgatccacgatttcctccaccaggagggttgataccttctccattggacggacct
ggcataccaccagcaccgttcgacccatacggtgctccacttggtctcccgccgccacct
atgcctaatatgccgccaccaattatgccaggtcccggcgattttcggaccagtggagct
ggaggtgggggtgctggtaacaacggagccggtgggggggatgacagcggacgaatgagc
agcggtccacaagcgatggacgatctcgcagctgagtacgaacggagaagacaccacagg
tctcgcgatgaacgtgacgatcgtgactaccgtgaagaacgggaaagaagacatcgtgaa
cgggagcgcgaacgggatagtcgagatgatcgacgagatcgtgaggatcgtcgtgagcgc
gaccggagtgatcgagatagggacagatcagatagggaccgcagtgaccgagatcgagat
agcgatcggcataggtcaagccgaaagtctcggcgacacgatgaagaagatgacgataga
agatcatcaaagcacaaacgttcaaagcgcgacgatgattcttaa
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