Varroa jacobsoni: 111266930
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Entry
111266930 CDS
T07417
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111266930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111266930
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111266930
mRNA degradation factors
5'-3' decay
Lsm complex
111266930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF658
Motif
Other DBs
NCBI-GeneID:
111266930
NCBI-ProteinID:
XP_022700537
LinkDB
All DBs
Position
Unknown
AA seq
148 aa
AA seq
DB search
MNSSGAGPSAADNIYFPGTVSLLQDLDKKLMVLLRDGRVLIGILRSIDQFANLVLHRTIE
RIHVGKKYGDIPRGVFIVRGENVVLLGEFDESRECMAGLQEVGVNEILEIQREDTRIRRE
TEDRRTRALRERGLLQYSLVESAHNEDF
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgaactcatcgggtgctggtccctcggcagctgacaacatatattttcctgggacagtt
tcgttactgcaggatctcgataagaagctgatggttctcctccgtgatggtcgagtactt
attggaatactaagatcgattgaccaattcgcaaacctcgttttgcaccgaactattgag
cgcattcacgtaggcaagaaatatggcgacatccctagaggtgtgtttattgttcgcggc
gagaacgtagtgttactgggcgaattcgatgaatctcgggaatgtatggctggcttacaa
gaagttggtgtcaacgaaatccttgaaatccaacgagaagatacccgcataaggcgtgaa
accgaagatcgacgcacaagggccctccgggaacgtggccttcttcagtactcgctcgtt
gagtctgcccacaatgaagacttttag
DBGET
integrated database retrieval system
