KEGG   Varroa jacobsoni: 111266979
Entry
111266979         CDS       T07417                                 
Name
(RefSeq) DNA ligase 3-like isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
vja  Varroa jacobsoni
Pathway
vja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111266979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vja03400]
    111266979
Enzymes [BR:vja01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     111266979
DNA repair and recombination proteins [BR:vja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     111266979
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 111266979
NCBI-ProteinID: XP_022700630
LinkDB
Position
Unknown
AA seq 948 aa
MDKIVQIGNNRSEGMSESGKKFCVEYAKRGAAACKKCKVKIDKGLLRIAKIVPNPFTDGG
SEMKEWYHTDCMFESFQRARATTKKIEDAEDLEGFQELEQDDRKKILTKIHQLQESLTMK
AKTKTTAKKLPAKRDSEEPIGANVNSLHISEAKRKKLDQNRADIQVSRTDESSKDNSFKE
FRKLCAKLYDESAYTAKTAIVRNFFEKGTCGKGFEGDTYLWVKFLLPSVNKRIYNLQSKQ
LCKLFARVFGGPIYDSMVEDLEQGDVAETVAKFHEEAIKCPPTPKANLSLQQVDRYLERL
SRLTREDDQAALLDEIAHSCTVNDLKMIVRLIKHDIRINAGPKHILDALNPAAYEAFHAS
LDLEEVVRQSLAEGFGSGVVTVGIKVCTPVKPMLAEPCRSVDFAFKRFPNGMFAEVKYDG
ERVQLHKRGNEFFFYSRSLKPVVAHKVNHFREYIPKAFPYCDSLIIDGEILLVNTKTDEI
LPFGTLGVHKKAQFREAAVCFFVFDCMFYNGKSLLSEPLSKRREILTAYMSVVKHHVQLS
EMEGIRSPARLKANIEDAINKGLEGLVLKDPASPYEPGKRHWLKVKKDYLQGGTMADSAD
LVVLGAYFGTGNKGGIMSIFLMGCYNPSTKRWVTVTKVHGGHDDATLQRLQKELQMKKIS
KNPNLVPSWMDVKQQLVPDFVTVDPLTSQVWEITGAEFSKAEAHTANGISIRFPRVSRIR
NDKSAEDATSLEELIRLFNLSKRQVLKLDDEVGNHITRSNDELLPGETRDGNKFNTSTPE
KNKKNARDRFDSAGNESCDKSPKKGKKESISPTKILTSSPSRKANSRTVKNNTEKEITFK
KDESSLFTVDSSACTGEDGEKAEGVNRARRRLPECDLPRLFTGIVVETLPTDFRYYQDLS
RYFIAYDGKISKKGVTHEIGTKKGTVCIDWIWESIKRRTKVDIDSYIN
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggacaagattgtgcaaatcggcaacaaccggtccgagggtatgtcagaaagcggtaaa
aagttttgcgtggaatatgcaaagcgaggagcagcggcctgcaaaaagtgcaaagtgaaa
atagacaagggacttcttaggattgccaagattgtacccaatccctttactgacggcgga
agtgagatgaaagaatggtatcatacagattgtatgtttgaatcgttccaaagagcgcga
gcgactactaagaaaattgaggatgctgaagaccttgaggggtttcaagagcttgaacag
gatgatcgaaagaaaatcctaacaaagattcatcaacttcaggaatcattgacaatgaaa
gcgaagacgaaaacaaccgcaaaaaagttgccagccaaaagagattccgaggagccgatt
ggagccaatgttaactcattacatattagtgaggcaaaacgtaagaagttggatcaaaat
agagcagacatacaagtatcaagaacagacgaatccagcaaggataattcctttaaggaa
tttagaaaactgtgcgctaagttgtacgacgaatcggcgtacacggccaaaactgctatc
gttcgaaactttttcgaaaaaggaacatgtggaaaaggattcgaaggtgatacctacctc
tgggtaaagtttcttctgccttcggttaacaaacgcatctataatttacagagcaagcaa
ctttgcaaattgtttgccagggtatttggcggtcccatatacgactccatggtggaagac
ttggagcaaggtgatgtcgcggagactgtcgcaaagtttcacgaggaggccattaaatgt
cctccaactccgaaagctaatctctcgttgcaacaagtcgacagataccttgaaagattg
tccaggttgactcgcgaagatgaccaagccgccttactcgacgagatcgcccatagttgc
accgtcaatgatcttaaaatgattgtcaggttaattaaacatgatatccgaatcaacgcc
gggccaaaacatatcctagatgctcttaatccggccgcatatgaagctttccatgcatcg
ttggatctcgaagaagttgtgcgtcagagcctcgcagaaggttttggttccggtgtagta
actgtaggcatcaaggtatgtacgcccgtgaagccaatgctagctgaaccttgtcgctct
gtggatttcgcctttaaaagatttcctaatggaatgtttgctgaagttaaatacgacgga
gagcgggtgcagttacataagcgcggcaacgagttttttttctactcacggagtctaaaa
cccgttgttgctcataaggtaaaccatttcagagagtatatcccaaaagcatttccatat
tgtgactcgttgataatagatggagaaatccttcttgttaatacgaagactgatgaaatt
cttccattcggaacgttgggagttcacaagaaggctcaattccgtgaggctgccgtgtgc
ttcttcgtgttcgactgtatgttctacaacgggaaaagtcttctgagtgaaccactaagc
aagcggagagagattctaacggcttatatgtcagtagtaaagcaccatgtgcagttatca
gagatggagggaatccggagtcctgcaaggctcaaagccaatatcgaagatgctatcaac
aaaggcttggagggtctcgttttgaaggatcccgccagtccatacgagcctggcaaacgt
cactggctgaaggtaaagaaggactatctacaaggtggaacgatggctgattccgcagat
cttgttgttcttggagcatacttcggtaccggcaataaaggcggtattatgtcgattttc
ctcatgggctgctataatccctctactaaacgatgggtcaccgtgaccaaggtgcacgga
ggtcacgatgatgcgacgcttcagagattgcagaaggagcttcagatgaagaaaatttca
aaaaatccaaaccttgtgccgtcctggatggacgtaaaacagcagttggtgccggacttt
gttacagtagatcctctcaccagccaggtgtgggaaatcacaggagctgaatttagtaaa
gccgaagcccacactgccaatggaatatcgattcgatttccgcgagtttcccgtattcga
aatgataaatccgcggaagatgctacgtcactggaagaactcattcgacttttcaatctg
tcgaaaaggcaggtcctaaaattagatgacgaagtaggaaaccatatcacccgtagtaat
gatgaattactacctggtgagacgcgagacggaaataaatttaacacaagtacgccggaa
aaaaacaagaaaaatgccagagatcgtttcgatagtgctggtaatgagtcctgcgataaa
tcaccgaagaagggcaagaaagagtctatttcacctacgaagatactaacgtcatcgccc
tctagaaaagccaatagccggacagtaaagaacaacactgaaaaagaaattacatttaaa
aaggatgagagttcactattcactgtcgattcttctgcatgcactggtgaagacggagaa
aaagcagaaggagtgaatagagcacgtcgtcgacttcccgaatgtgatttacccagattg
tttactggtatagttgtagaaacattaccaaccgattttagatactatcaagacctttca
aggtattttattgcttacgacggaaaaataagtaagaagggtgtcacccatgaaatcggt
acaaagaaaggaacagtttgcattgactggatctgggagtctataaaaaggcggaccaaa
gtcgatattgacagctacataaactga

DBGET integrated database retrieval system