KEGG   Varroa jacobsoni: 111267048
Entry
111267048         CDS       T07417                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
vja  Varroa jacobsoni
Pathway
vja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111267048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vja03041]
    111267048
Spliceosome [BR:vja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111267048
 Complex B
    111267048
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded AID
Other DBs
NCBI-GeneID: 111267048
NCBI-ProteinID: XP_022700728
LinkDB
Position
Unknown
AA seq 569 aa
MYSMSRPLPTPQANLGVNMWQADSSRHAEIDSKYGGVQTGPVLAGPGALKAQAHVTLEKI
RSFQMPDLTPEQKEMVDKAKKYAMEQSIKTVIIKQTMAHSQQQKNLERYQALVLMCRIYV
GSISYELREDAVRTAFKPFGPIKAINMSYDTVTRRHKGFAFVEFELPEAAQLALEQMNGV
FMGGRSIKVGRRSNMHQAAPILEQILEDAKQSSRIYIASIHQDLSETDIHSVFEAFGKIK
SCKLAPGTLPHEKHREYGFIHYETNQAASDAITSMNLFDLGGQFLRVGRAITPSDCALGS
LGVVLPVAPVQAGPLPTAAAVAAAAAAAKIRALESSGLHTKAIPTTGTLTAGRQPGNGVP
TVPGLPTANPLLPGLVTLDADGKPKVHLPPPTVLTSLPPIGGAGPVPPPTASTGSPPETK
KPMLDESLEDGRELPLPPGDSEDTERDVAIKGGGARLAVMKKLMRTKTREQCVMILRNMV
GEDEVDEDLEPEISEECGKFGTVNKVTIYKEKQGEEEDAQIEVKIFVEFSKTSEMHMAIK
ALHNRYFGGRQVIAEMYDVFLFDSGNLSA
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgtattcgatgagtaggccgttaccaacgccacaggcaaaccttggtgtcaacatgtgg
caggcggacagctcgagacacgcggaaatcgacagcaaatatggtggcgtccagaccggg
ccggttcttgcgggtccaggtgcgttgaaggcgcaagcccatgtgacactcgagaaaatt
aggtcattccaaatgccagatctcacacccgaacagaaggaaatggttgacaaagctaaa
aagtacgccatggagcagagtatcaagacagtcatcatcaaacagaccatggcacatagt
cagcaacagaaaaaccttgaacgctatcaggcgttggtattaatgtgtcgcatatacgtc
ggaagcatcagctacgagctacgcgaagacgctgtccgcacagcttttaaaccatttgga
cctataaaggctattaacatgtcgtatgacaccgttacgcgaagacataagggattcgct
tttgtcgaattcgagctccctgaggcggctcagcttgctctagaacagatgaacggagtc
tttatgggaggacgaagcattaaggtgggccgacgttccaatatgcaccaagcagcgccc
attctcgagcagatattggaggatgccaagcagtcgtcacggatctatatagcttcaatt
catcaggatctaagtgaaacggatattcactctgtgtttgaagcattcggcaaaatcaag
agctgcaagctagctccgggtacacttccgcacgagaaacaccgtgaatacgggtttata
cactacgaaacgaatcaggccgcatcggatgccatcacttcgatgaatctgttcgacttg
gggggccagttcctgcgtgtaggtcgcgccatcactccatccgattgtgcccttggtagt
ctcggcgttgttctccccgtagccccagtacaagctggaccactacccacagctgcggcg
gtcgcagccgccgccgccgctgcgaagattcgcgccctcgaaagcagtggactgcacaca
aaagcgataccaacgactgggacgcttacagctggccgtcaacctggaaatggcgttcca
actgtaccagggctcccaactgccaacccactgctgcctggacttgtcacgcttgatgct
gatggcaagccgaaggtccatcttcccccaccaactgttctaacgtcgcttccgcctatt
ggtggggcggggcccgttccaccgccgactgcatcgacgggttctcctccagagaccaaa
aagcctatgttagacgagtctctggaggatggccgtgagctgcctttaccgcccggtgat
tccgaggacaccgagcgagacgtagcgatcaagggcggcggggcccggctggccgtcatg
aagaaactcatgcgtaccaagacccgtgagcagtgcgtcatgattctcagaaatatggtc
ggcgaggacgaggtggacgaagatttggagccggagatctcagaagagtgcggcaagttc
ggcacagtgaacaaggtaaccatatacaaggagaaacaaggtgaagaagaggacgctcaa
attgaggttaaaattttcgtcgaattttcgaaaacgtcagaaatgcatatggctattaag
gctttgcacaaccgctattttggggggcgacaagttatcgctgagatgtacgatgtcttt
ttgtttgacagtggtaacctttccgcttaa

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