Varroa jacobsoni: 111267448
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Entry
111267448 CDS
T07417
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
vja
Varroa jacobsoni
Pathway
vja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111267448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vja03009
]
111267448
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111267448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap_D4
Nrap_D6
Nrap
Nrap_D2
SMODS
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
111267448
NCBI-ProteinID:
XP_022701446
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MAVMVGSDSDSDQSDYPEQSTEVESSDNGECQSKEDLCPPSKKIKRQLHQKRGAKSKGFL
KGLKAGEEMRALSDFEMNVVTLQISNILKDISISEKRRQQAMSWFTQLKEALLNVQISKK
HAEKMRMPLRTMPADPQIADFTFRSPKDVSLVGSFAYETAIKLSSLDVAVEMPRDCFVKW
DYHNVKYHRKRALYLTYLAAALQKIPSLHSKLYWRVEGDDRLPILVAVSPSGNLTAHILP
YPESGLFQFSRFAPDKLNVQEKFYGLPPNSRKPVLIYNGGVLQDMLMVQNRNELSEQLRT
SSGIRGGIQILKLWLLTRGLCNGPDGFKSYHLTEYADYLLRSGRLNSLMGVYQVVRAILA
QMQMEDWTSERLLAGNTCSTIAKTSHKFMLEQEVAAILVDRTGYHNIFYRVSLDTLDLLR
AEARSALQSLNSSSVNLINELLWTPVSFYRKLDCYIRIEFGHGSKQLTDSVDSWIRADFG
GSVLWPTSRAILATLRRALGRRVSLLVARPLTHLEWEIGGNFPEEASSIAVGWNLDPDEL
HHIEKGPPADSSEASEFRDFWGHKCEIRRFQDGSILETVVWPGETAEDRKRITYNICDYI
LRQKHKINKISFSGEMCDRILQLPNCHFTSRYGTGDEQLVDVNTKFNEFAKTLRKLPDLP
VDISAVCGLSQELSYTAVFPQVAAACDTDTRLVTRSAGRCIPRADHGVPKLVRPIDVLLQ
VECSKWPDDLNAFRYMKTAFYITLASKLEGRECQVFHDHLLVLFQGLLFRVRVSCTKEIA
LTKQVISPEGMVRHVENKMSERLEFEYIVLPKLISALHGLHLQHTTFGPACRIAKRWLSS
HLLYEAFPSVVVDLLMAYIYIHPLPYFVPHSSRAAFQRFLHLLANFDWRLNPLVINFGEQ
FTSETYQQIHLHFVRNRPSLPALFIHTPFDKKEESWITTENPIGPALQRAVVLARKSLAF
IEEQMVEGQNILGVFKTSLDIYDFVIKLDERFMATYYLNNSSTEKLSFTKMRDEIPVVDF
DPVRLYLDDLQAAYGHLCVFFYDGYGGTDIGGLWLPKSQAPVPFKVHNLIGRKLTEPAKV
LTPNYPAILSDLKTLGQGLVKNVVEQKCPSTYSRLRKDSH
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgatggtgggcagcgattccgactcggatcagtccgactatcctgagcaatct
acagaagtggaatcgtcggataatggagagtgtcaaagcaaggaggatctatgtcctcca
tctaaaaaaatcaagaggcaactgcatcaaaagaggggggccaaatctaagggctttctg
aaagggctaaaagcaggtgaagagatgcgagcattatcagattttgagatgaatgtggtg
accctacaaataagtaatatccttaaggatatttccatcagtgagaaacgacgtcagcag
gcgatgagctggtttacccagcttaaggaagctttgcttaatgtccagataagcaaaaaa
cacgcagagaaaatgaggatgcctttgcgaacaatgccggctgatccacaaatagctgat
tttacgtttcgctcacctaaagatgtctcgttggttggcagcttcgcatacgagacagcg
attaaattgagctcccttgatgtggctgtggaaatgcctagggactgcttcgtgaagtgg
gactaccacaacgtcaaataccaccgaaagagagcactttatttgacgtatcttgccgct
gctttgcagaaaataccatcactgcactcgaaattgtactggcgtgtagagggagacgat
cgcctacctattctagtggctgtttcaccctctggcaatctaacagcacacattctacca
tatcctgaaagtgggctatttcagttctcacgattcgcgcctgacaagcttaacgtgcag
gagaagttttacggcttgcctcccaactcgcgcaaacctgtgctcatttacaatggaggc
gttcttcaagatatgctcatggtacagaacagaaacgaactgtcagaacaactaaggact
tcaagcggaattcgcggaggtattcagattttaaagttgtggcttctcacaagaggactc
tgcaatggcccagatggctttaagagttatcatctaacagaatatgccgactacctttta
cgttcgggacggttgaattccctcatgggtgtctaccaagtagtacgagccattctggca
caaatgcagatggaggattggacttcggaacgtttgcttgccggcaacacatgctccacg
attgcaaagacttctcataaattcatgctggagcaagaagttgccgctattctcgttgac
cgtacgggttaccataacatcttttaccgagtttctttggatacacttgatttgttacgg
gctgaggctcgctccgcacttcaatcgctcaactcgagctcggtcaacctgattaatgag
ctactttggacacccgtctctttttatcgtaagttggattgttacatccgcatcgagttc
ggtcatggcagcaaacaactaaccgacagcgtggatagctggattcgggcagatttcggg
ggaagtgtactttggccaacatcgcgggcaatattggctaccctacgccgagcactcggt
cgtagggtttcactattagtggcccgaccattaacccacctagagtgggaaatcggtgga
aacttccccgaagaagcaagttctatcgcagtaggttggaacctggatcccgatgaattg
catcacattgaaaaaggtccgcccgccgattcttcagaggccagcgaatttcgcgatttt
tggggacataaatgtgagatccgccgttttcaagacggctcaattttagagacagttgtg
tggcctggtgagactgcagaggaccgaaagcgtatcacatataatatatgtgactatatt
ttgcggcagaagcacaaaataaacaaaatatcattttcgggtgaaatgtgcgatcgcatc
ctacagttgccaaactgtcattttaccagtcgttacggaactggagacgaacaacttgtt
gatgttaatactaagtttaatgagtttgcaaaaactttacgaaagctgcctgatctaccg
gttgatataagcgccgtttgtggcctgtctcaagaacttagctatacagcagttttcccc
caggtagcagctgcatgcgatactgacacgcggcttgtaacgcgtagcgcaggtcgctgt
attccccgtgcagatcatggcgtacctaagcttgtacgacccatagatgtgctactacaa
gtggagtgcagcaaatggcccgacgacctgaatgcctttaggtacatgaagacggcattc
tatataacattagccagcaagttagaaggccgtgaatgtcaagtgtttcatgatcacctg
ctagtgctttttcaaggcttattgtttcgggtgcgtgtatcttgtacgaaagagatcgca
ttaactaagcaggtaatttcgcctgagggcatggtaaggcatgtcgaaaacaaaatgagc
gaacgcttagagtttgagtatattgtcttgccaaagttaatttcagctttgcatggccta
catcttcaacacacaacattcgggcctgcctgccgtattgcgaagcggtggctctcttcc
cacctgctgtatgaagcattcccttcagtggttgtggacctgttaatggcgtatatttat
attcacccattaccatattttgtgcctcattcgtctagagcagcttttcagcgttttctg
caccttttggccaattttgactggcgtctcaatccgctcgttatcaattttggtgaacag
tttacttctgagacttatcaacaaattcatttacatttcgtccgaaatcggccgtcgttg
ccagcactatttatacacacgccgtttgataaaaaggaagagtcatggattacgacagaa
aatccaatcggtccggctctacagcgggcggtagttttagctagaaaaagtttggccttt
attgaggagcagatggttgagggccaaaacattctcggtgtttttaaaacatcacttgat
atttatgattttgtcatcaaattggacgaacgtttcatggctacatactaccttaacaac
agctcgactgaaaagctttcattcactaagatgcgggacgaaatacccgtggttgatttt
gacccagttagactttaccttgacgatttgcaagctgcgtatggccatttatgcgtattt
ttttacgatggatacggaggaactgatatcggtggattgtggttgccgaaatcacaagct
ccagtcccattcaaagtgcacaatcttattggaagaaaattgactgagcctgctaaggta
ttaacgcccaactacccggcgatacttagcgatttaaaaactcttggccagggtctagtg
aaaaatgttgtggagcaaaaatgtcctagcacctatagccgccttcgaaaggatagccat
taa
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