Varroa jacobsoni: 111267598
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Entry
111267598 CDS
T07417
Name
(RefSeq) HEAT repeat-containing protein 1-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
vja
Varroa jacobsoni
Pathway
vja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111267598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vja03009
]
111267598
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111267598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
HEAT_EZ
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
111267598
NCBI-ProteinID:
XP_022701633
LinkDB
All DBs
Position
Unknown
AA seq
2011 aa
AA seq
DB search
MATSMTTLAAQLRKLQTPQTALLDQRTTTSRASLLFDAKEAATLDRDIIFAIGCSGLEEL
CKLNQHVFGRYDRTLFSDASKDFQRAIQTKEQNEQLNTTMTDFLHRLSPYLLLRPAHKAL
EWLLYRFRIHEFNTVALMQAILPFHETNIFARIIQLIDLSDETTCWHFMSAIKAQGSVLT
KKALIAQCAKSPGLFRFVCDSLLAMRKVNQGSALRPAINLSTGVILGVMELHGHRINNKL
VSAIIAHVADGFVHAKQDGNVEWVSANAMMVAQLARKQLALKSDLLQLLLITMVKSLNEE
SVNSGLFALLTAYRYQTNLDTLPQKVTKGFLGFTNLAERLKAAISGSRHADKFMRLFIHG
LFVHTLMEVPANDVGAFVLPYFNFITETTEQRQTVAEQFLKAYLVVRVSNEGKKCIPAAG
EILQKLKQRAGDELDAEIVKGFQTSDRELIAELASECSLGIQHSVVGDNGETVFLALMSK
MSHIRMSAVTTIISKAPTTEADPFVKRSLKNLIATETDVGVYNALIDSLSAETFLKFVDA
DEAISIITERLCTIRKKKWVHVNQKLIQLVCNGLAPSANERSVLRFLLTMSVVFRSFDLA
IIDECLKSNVVKSHQELKHLAKCTVSDNMPAIEICDSIAAALAKGFSASAIDDYVQWLLS
DSGTNLKTRYASLRFVEHLIIQSKPLNTGTLNAALDTLQVMLLDLEETDGDEIETLAGGA
LPIRCVTRVIGALLKNVQPIKELEKVPSWHKNVDTRSSEVAFLRRVFSIAVGRQKKEISF
RDMLHILFSSCLPSAEFRCNFLCDMLLGHLTGVQSDDNLQLQAHSLCLLAHFIGDVDGDS
IELITLSIVIVLLSPSKRIRRLAISVLEHCNKDAFIEYLVKHGSSIADVESVLKCVATFH
RSHKITFLNRMFTNEGLTPIVRLGIARMLRNVASPSTIDVCMDIVHRYIDSPGLIIDSVN
RELIKLCLEKLSLGSAKKLSDVQQRILFGVLTSSNETMRMLGLQCLSSDLIGKIADTEIV
RLIDYLLSSMIDVLSESQRDAAESALRIICQHQTKLVVVELSKVTVDELANLHSVRDVKR
MRTSLKETNVKEIKPSDDPLETAEWRRAVILLEILHSVTELKQQDAQGVVTALYDVLRRS
LELPVGCVNVEYVKQCILSCLQVHGTCSHELLRPHRHQISLLVKALRLSQCAQTQHAILV
MLNHMARLYPDEVLQNMISVFTFMGTSLLRQEDEYSFQVVVQTIQSVIPILLEASKSKSN
KDVVSKVTGVFVDSWPDIPEHRRYPIFKKLIETLGSADYAWTLVAQMIDQLLEKEADLED
SDFLEFMLGLVGDFSIDTTLCTCYRLLQFALSVPLYQKQANESMIDKEIVNAAQCSDQRL
ADFKSVSAMFVEQVLSGTNFISLAAELDENELGQAENMYQALLAVSLESIHVLNAAIQEC
ADDELLESWKSNISLLHDCVDRVNGVLRPNTLVAVMQQLLTQELPSIRRNAMDMLNNKLI
AETFFDNCEQIASLVEPLSILVSKSPGEQDTMGRQTALVSLKLICRRIPAANDEINKVFD
VVDKLFSSHDKLSDVIVGGVLLLFAELCHSCPTKMLNHFAKLMKRFLIISENGAKKSEAI
VLGLVVSYHRLVGNLAGFLSPHLPKLISHVCRLCAEQQLKERDEALKEQLTKICLHIGES
ISLRVLLPAVEDCITGQPVVKEQPLYLNHLLKIFKAAIESSDRHIFDQQREVVQSLVLRL
LYFREEAAAEQMDSEHVTNAEGFIVDCVTTLSLKMSEMTFRPFIMKLYVWATLVAEEMDN
DCRFHRTATFFHLCYKLSDTLKGLFVLFVGQFIQQAVNVLDKYRAEVAKETKDVLLETTA
WILGTLSNCFQYGGKSFVTSEMYKTVAKSIVDEIENTIDSSASTYERRILTRVTPAIVNL
AVACTDADCKDLHNKVLFKTRNSSARIRFSALQTFAAMVRRLGDDYVSLLPESVPFLAEL
MEDDRPEVEHLAQKVVQEMEQLLGEPLMKYF
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggctactagcatgacaactctagcagcgcagctacgaaagctgcaaacacctcaaacc
gcactgcttgatcaaagaacgactacaagccgtgcgtcacttttgttcgatgccaaggaa
gctgcgacgttggatagagacattatctttgcgattggatgttcagggctcgaagagctg
tgcaagttaaatcagcacgtttttggacgatacgatagaaccttgtttagtgatgcttct
aaggattttcaaagggccatccaaacaaaggaacagaatgagcagctgaacacaacgatg
acagattttttgcacaggctttcgccatatctcctacttcgtccagcccacaaggcactg
gagtggttattataccgctttcgcattcacgaatttaacacagtagcccttatgcaggcc
attttaccgtttcatgaaacaaatatctttgctcgaataatccaactgatcgatctgtca
gatgaaacaacgtgttggcacttcatgtccgctataaaagcccagggttctgtgttaacg
aaaaaagcattgatcgcacagtgtgcaaaaagccctggtctatttcgtttcgtatgtgat
tcgctgctggcgatgcgtaaggtgaaccagggtagcgctttgcggccagcaatcaacctg
tctactggagttattctaggagtgatggagctgcatggacatcgtatcaataataagcta
gtgtcagcaattatcgcgcatgttgctgatggatttgtgcatgccaagcaagacggcaat
gttgaatgggtcagcgcaaatgctatgatggttgctcagttggctagaaaacagttggca
ttaaaaagcgacctccttcaattattacttattacaatggtcaagtccttgaatgaagag
agcgttaatagcggtctttttgctctactcactgcataccgctatcaaacgaacttagat
acactgcctcagaaagtaactaaaggttttctcgggtttacaaatctagctgagagatta
aaggcagccatcagcggaagtcgccatgcggataagtttatgagactgttcatacacggc
cttttcgtacatactcttatggaagttccagccaacgacgtaggcgcgtttgttctgcca
tacttcaattttattacggagacaaccgaacaacgccaaacggtagccgaacagttcttg
aaggcatatcttgttgtgcgtgtaagcaacgaagggaaaaaatgcataccagctgccggt
gagattctccaaaagctcaaacaacgtgctggcgatgaattggatgcagagattgttaaa
ggattccaaactagcgaccgtgaactaattgctgaacttgcgtctgaatgtagtcttggg
atccagcactcagttgtaggcgacaacggtgagaccgtattccttgctttaatgagcaag
atgtcacatatacggatgtctgcagtcacaaccattataagcaaagctccgacgacggag
gcggatccatttgtgaagaggtctctcaagaatcttattgccacagagacggacgttgga
gtttacaatgcacttatcgattcattgtctgccgaaacatttctcaaattcgtcgatgca
gatgaagctattagcataattacagagcggctttgcaccatccgtaaaaagaaatgggta
catgtcaaccagaagctgatacaactagtatgtaacggccttgctccgtccgcaaacgag
cgttcagttctacgatttctcttaacaatgtcagtagtgtttagatcgtttgatttggca
ataattgatgagtgtctgaaatcaaatgttgttaaaagtcatcaagaactaaagcatctg
gccaaatgtacagtttccgataatatgccagcaatagaaatttgtgactccattgctgca
gcattggccaaggggttttcagcttcggcgatcgatgattatgtgcagtggttgcttagt
gacagcggcacaaatctgaaaacgcgctatgcaagccttcggtttgtggagcaccttatc
atccagtctaaaccgcttaacaccggtaccttaaacgcagcgttggacacattacaggtt
atgcttttagacttagaggaaacagatggtgacgagatcgaaaccctggctggcggagcg
cttccgattcgctgtgtgaccagagttattggagcacttttgaaaaatgtgcaacccatt
aaagagctagagaaggttccctcgtggcacaaaaacgtggacacccgcagcagtgaagtg
gctttcctccgaagggtgttctccattgccgttggacggcaaaaaaaagaaattagcttt
agagatatgctgcacatcttgtttagctcatgcttaccgtcagcagagttcagatgcaat
ttcctgtgcgacatgttacttggacatctcacgggtgtgcaatctgatgacaatcttcaa
ctacaagcgcactcgctttgtctactggctcattttattggtgatgtggacggagattcg
atagaacttattacgctgtcaatagttatcgttctgctatcgccatcgaagagaattcgc
cgacttgcaatttctgttttggagcactgtaataaggacgcttttatcgagtaccttgtg
aagcatggaagttcgatcgctgacgtcgagagcgtcctcaaatgcgtcgctacgtttcac
agatcccataagataactttccttaaccgaatgtttacaaatgaagggctaacgccgatt
gtgcgactaggaattgctcgaatgcttcgaaatgtcgcttccccgtcgacaatcgatgtg
tgcatggatatcgtacatcgctatattgacagtccaggactcattatcgactcggtgaac
cgtgaactaatcaaattatgccttgagaaactttcgctaggatccgctaaaaaactcagc
gatgtccagcagagaatactctttggagtactgacgagctcaaacgaaacgatgagaatg
cttggtttgcagtgcttgtcctcagatcttatcggaaagatcgccgataccgaaatagtc
agactcatagattatttgctgtcatcgatgattgacgtgctatcagaatcgcaacgtgat
gcggctgagagcgctctcagaattatttgtcagcatcaaacaaaactagttgtggttgag
ctatccaaggtaactgtagatgagttggctaacctacactcagtaagagacgtcaaacga
atgcgcactagcctcaaagaaacaaatgtgaaggaaatcaaaccttcggatgacccactc
gagacggcagaatggcgtcgtgccgtcattttgcttgagatactgcatagcgtaaccgag
ctgaaacaacaggatgcccaaggggtggtaacggctctttatgacgtacttcgtcgatcg
cttgaattaccggtcggttgcgtgaatgttgaatacgtgaagcagtgcattctgtcgtgc
ctacaggtgcatggaacctgctcccacgagttactccgacctcatcggcaccagatcagt
ttgctggttaaggcactccggttaagccagtgtgcccaaacccagcatgctattctggtc
atgctcaaccatatggcgcgcctataccccgatgaggttttacaaaacatgattagtgta
ttcacgttcatgggaacgtcgcttctacgccaagaggatgaatattcattccaagttgtt
gtgcaaaccatccaatcggtaatccccattctgcttgaagcgtccaagagcaaatcgaac
aaggacgttgtgtcaaaggtcaccggtgtcttcgtcgattcttggccggatattccggag
cacagaagatacccgatttttaagaaacttattgagacacttgggtcagcggattacgcg
tggacactggtagcacaaatgattgaccaactacttgagaaagaggccgaccttgaggac
tctgatttcttggagttcatgctcggccttgttggtgattttagtatagacactacactt
tgtacgtgttatcggctgctgcaatttgctctctcggtaccactataccaaaaacaagcc
aatgaatcaatgatagacaaggagatcgtaaacgcagcacagtgcagtgatcaaagactt
gccgacttcaaaagcgtgtccgctatgttcgtcgagcaggtcctgtccggaacaaacttt
atttcattggcagctgaacttgatgagaacgaactaggacaggccgagaatatgtatcag
gctcttcttgcagttagccttgaatctattcatgtgctgaatgctgccattcaggaatgc
gccgacgatgaattgctagagagttggaagtccaacatttcgctgttgcacgactgtgtc
gaccgggtaaacggcgtcctcagaccaaacactctggtggctgtaatgcaacagctacta
acacaggaactgccgtcgattcgtagaaatgcaatggacatgcttaacaacaagctaatt
gctgaaacgttcttcgataactgtgaacagattgcctctctggtggagccgctctctata
ctggtgagcaagtcacctggtgagcaggatacaatgggtcggcagaccgcgctagtgtct
ctgaaacttatctgcaggagaataccagctgcaaacgatgagataaataaagtcttcgac
gtcgtagacaagctattcagcagccatgacaaactatctgatgttatcgtaggcggggtc
ctgctcctgtttgcagaactgtgccactcctgccccacgaagatgttaaatcatttcgca
aagctcatgaaacgatttttgatcatttcagaaaatggtgctaagaagagtgaagccatt
gttcttggccttgtggtcagttatcatcgtctcgttggaaatctagcaggttttctttca
ccacatctacctaaactcatcagccacgtttgtcgactttgtgctgaacaacaactcaaa
gagcgtgacgaagctcttaaggaacaattgacaaagatatgccttcatattggcgaaagt
atttcgttgcgagtcctgctacctgcagttgaagactgtataaccggtcagcctgtggtg
aaggaacagccgctttaccttaatcatctgctcaaaatcttcaaagcggccattgagtca
agtgatcgtcatatatttgatcaacagcgtgaagtggtacagagtctggttttacgtcta
ttatatttccgtgaagaagcagcagccgaacagatggattctgagcatgtgaccaacgct
gaagggttcattgtcgactgtgtcacaactttatcgctaaagatgtccgaaatgacgttc
cggccattcatcatgaagctttacgtgtgggccacactggttgccgaagagatggataac
gattgccgtttccatcgtacggccacatttttccacctttgctacaagttgtccgacact
ctgaagggactattcgttctttttgtaggacagtttatacagcaggctgtaaacgttttg
gacaaatatcgtgctgaagtagcaaaagaaacgaaagatgtattgctagaaacaacggca
tggattctgggcacactgtcgaactgcttccagtatggtggaaaatcatttgttacatct
gagatgtacaagactgttgcaaaatctatcgttgatgagatcgaaaacacaattgatagc
tcggcaagtacatatgaacgacgaattctcacgcgggtaaccccagccattgttaatctg
gcggttgcatgtacagacgctgattgcaaggacctccataacaaagtgttgttcaagacg
aggaacagttcggcccgcatccggttttcggcgcttcagacatttgctgcaatggtaagg
cgacttggagatgactacgtatctttattgccggaaagtgtaccattcctcgctgagcta
atggaagatgaccgccctgaggtggaacatctggcacaaaaggtcgttcaagaaatggaa
cagctactcggggaacctttgatgaaatatttctag
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