Varroa jacobsoni: 111267617
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Entry
111267617 CDS
T07417
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111267617
09123 Folding, sorting and degradation
03018 RNA degradation
111267617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111267617
03041 Spliceosome [BR:
vja03041
]
111267617
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111267617
mRNA degradation factors
5'-3' decay
Lsm complex
111267617
Spliceosome [BR:
vja03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111267617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111267617
NCBI-ProteinID:
XP_022701674
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSRKTSTSDFLKQLVGRPVVVKLNNGLDYRGVLSCLDGYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTVKRRV
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaaaacttcgacgtcagactttctgaaacaacttgtaggtcgtcccgttgtt
gtaaagctcaacaacggactcgactaccgaggtgttctctcgtgcctagatgggtatatg
aacattgcactggagcaaacagaagaatatgtcaatggacaactcaaaaacaagtatgga
gacgccttcatccgcgggaacaatgttttgtatatcagtacggtgaagcgccgcgtatga
DBGET
integrated database retrieval system
