Varroa jacobsoni: 111267730
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Entry
111267730 CDS
T07417
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
vja
Varroa jacobsoni
Pathway
vja03420
Nucleotide excision repair
vja04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111267730
09124 Replication and repair
03420 Nucleotide excision repair
111267730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111267730
03400 DNA repair and recombination proteins [BR:
vja03400
]
111267730
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111267730
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
111267730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Ge1_WD40
WD_LRWD1
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
111267730
NCBI-ProteinID:
XP_022701906
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MRFDSRLNLLYDLQRGCISAATFSRTQMAGKIAELCLSKSLDVERCHRSPVNTLHLDPVE
GRYLLSAGASGQIFIHDTHEVDPTEHSNGGTLKVVCRIDKSNRHCHEFSVESIQWWPLDT
GVFASSGMDRNFKLWDTNRLRPVLVQKMERRIYRHHVSSLNSQMVLFATEYPYAQIMDLR
VGTKIHQLSGAHRGTLLTVAWSPTCENICVTGGSDGKCVLWDIRYSRGHLTALDVHSDGK
GRGAHRKAHDGRLVSLKFTPDGTGLVTFGEDNAVRLWDVALAKNRQINFGRVKCHALKGV
KIAMTTDTSPPMVIVPSDQLVKIFDLTSGLKLIDLTGHFNSVNAVEYCSFSNRLYSAGSD
RNILLWTSTDLLDEEANQKGYIQQEESGVATRKPRQGLSVVTQDNWSSDEDDNGPMR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcgacagtaggttaaacttgctttacgatcttcaacggggctgcatatcagca
gcgacctttagcagaactcagatggctggcaaaatcgctgaactttgtctgtcaaaaagc
ttagacgttgaacggtgccatcgctctccggtgaatacgctccatcttgatcctgtggag
ggcaggtacttgttatcggccggtgcttcaggccagattttcattcatgacacgcacgaa
gtcgatccaaccgagcattccaatggtggaacgctaaaggtcgtgtgccggatcgacaaa
agcaataggcattgtcacgagttcagtgtggagagtatacaatggtggccactggacaca
ggcgttttcgcttcatcgggtatggatcgtaattttaaattgtgggataccaaccgtttg
aggccggtcttagtacagaagatggagcggcgaatttatcgccaccatgtgtcatcgctc
aattcacagatggtcctttttgctaccgagtatccatatgcgcagatcatggatctgcgg
gtcggaacgaagatccatcaactgtccggtgcccatcgaggcacattgctcacagtggcc
tggtcgcccacctgtgagaacatatgtgttaccggtggtagcgacggcaaatgtgtactg
tgggacattcgctactcgagaggccatttgacagcactcgacgtgcatagcgatggcaaa
ggaaggggtgcccatcgaaaagcacacgacggacgcctcgtctcgctaaagttcactcca
gatggcactggactggtgactttcggtgaggacaacgccgttcggttatgggacgtagcg
ttggcgaagaatcgtcagatcaacttcggtcgcgtgaagtgtcacgcactgaaaggtgtc
aagattgcaatgaccacggacacttcaccgccgatggtgattgttccatcggatcaactt
gtgaaaatatttgatcttaccagcggtttgaaactcatagatctgaccggccacttcaat
tcggtgaacgctgtggaatactgttcattcagcaacagactgtattcggctggcagtgat
cgtaatatattgctgtggacttcgacggatttgttggatgaagaagccaatcagaagggg
tacatccaacaagaggaatccggagtagctaccagaaagcctaggcagggtctatctgtt
gtcacacaagataactggagtagcgacgaggatgacaacggacccatgagatag
DBGET
integrated database retrieval system
