Varroa jacobsoni: 111267776
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Entry
111267776 CDS
T07417
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vja
Varroa jacobsoni
Pathway
vja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111267776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vja04131
]
111267776
Membrane trafficking [BR:
vja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111267776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
zf_RING_Vps8
Clathrin
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
zf_RING_Vps8_fungal
ANAPC4_WD40
TPR_VPS8_2
zf-RING_5
Beta-prop_WDR5
zf-RING_2
Beta-prop_EML_2
Beta-prop_THOC3
zf-RING_11
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_WDR3_1st
EIF3I
WDR55
zf-rbx1
zf-C3H2C3
PHD
zf-C3HC4
zf-C3HC4_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
111267776
NCBI-ProteinID:
XP_022702003
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MNSLESEPASSSTNDPVNGEVAHVFDGTLSNEEAHFSGDFDAASGSTPFFCSEINFNEIS
DTLSIASGISSLSSTSKLRRSPKPAVKGSVVRHVQLRQIGAQLQRAFESGEVGSPSAMAV
ATLIAIGTSNGVTLVFDSEQILRCKLGASENNHGLVSAVSFNSDATRIIVGHSKGHMTMW
DTSNGKLLRNLSDVHTPNHGVLLLAFTGDPTTAVVTDTGGSVFEVNFRKILTSRSYESNC
IFSGSRGEVCAMEPLRVACRLRGHPIEGLSLVALGTVTKCIVILLRPVVTVVFTHQLRAE
TDTIPVLSWQFSFFQEGSRKVCSPVLAFGRKSTIYLFKVHTQSNHKVTFEPLQQLEVSYT
MRQLCFVNYKTLAILDHRESLKFLDVRLDEEVESMDCSDLDIIYEGSRYRAEDTGGNVSR
AMTVIGETACANTMVSFGSQCLILGGRGIHIYSMRSWTERVNFFSKQKLYSEALKFAISY
YNDEGEATSSNRVIEIVTPRTEKSQALVAEKIALLIEEFGLFLVDREGQKIDNLLTHYAA
NVPLCIHYAVILPTKYQILDTLYELFAQDPMALTVFLSSLQPYISGGDLPELNPVIVKDF
VNLLSCENKFGELERSLVQLAITSIDIHQVMSVCKENRLYDAIIYIHNAAMLDYTGPIEE
MVDIIAAPLAMNKEPNYAEIEVGNKLMVYISCCLAGAAYPCGTLSLAEASRAREAIVKYL
TTPVPSGSLRPPFYCLRTLLHFNAREFLNVVSLAFQDEQLSATEESGETTETPEPPEAIA
ATLGQDKQQIVDILLQLMVREEGFETHEMSALFTFLARQMAKQVAGTGIRVDKQLFEQVV
EYLTNADEESRMEERQQAMMELLTSGGLKDIPIERLLELAEQARFYRVCEILYEQQRRFD
KVLLCYLNDPARRTKSFAYITQILNGVDYKAAEKIQLENQVVAVIDELIQVDAMSMAALV
IDLLPKRIKEVLDRLEGMPETQYHLLEGVYRLAAGECQDTIIGVKDAEAVTVSPDVQEKY
VELKCIFDPDGVLAFLKGVEYFRDLEVLAICKTHRVYEATAFILEKLREIPEAFESYLSL
VEQHLIQWLRSLDTASPPSDCSKVSDQIGKVVYFLQRNCGALQADDRETMWFRLLDVVMK
PQKDSLDRPDLRELTSSLLNAMMGHVSPYSILTKVMSDPAYNLNEFREVRRFIGAMIDTY
NFEQTMLATTSNLINCDLSCKLADLKRLANRAVVATVATCAFCNRPYAGADTREVIVFRC
GHGYHRECVDQKFEARTVSDLKCLRCGRMNCTAFGLPSESSTHAGNAQEGQKGGAAADGS
RQVRKRRIRTIVPRLLPKEAYTENNETRSVTVYSTLSPVQMEALEHFKMTQKMPQASTSN
EEVRLRAGTLLSRDDFKLFLGPSPDNPVARELFS
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttagaatcggaaccggctagtagcagcactaatgatcctgttaatggtgaa
gttgcacatgttttcgatggaactcttagcaatgaggaggcgcacttttctggagacttc
gatgcagccagtgggtccactccgttcttttgttctgagattaatttcaatgagatttcg
gacaccctatcaattgcttccggaatcagctcgctatcttctacatcgaagctaagacgg
tcgccgaagccagcggttaaaggaagtgtggtacgtcatgttcagttacgacaaattgga
gcgcagttgcaaagagcatttgaaagtggggaggttggttctccatcagccatggccgtt
gccacgctcatcgccatcggaacttcgaatggagtcaccctcgttttcgattcggaacaa
attctcagatgtaagctgggcgcatctgaaaataatcatggtcttgtgtcagccgtctcc
ttcaattctgatgccacgcgaatcatcgtgggccattccaaaggacatatgacgatgtgg
gacacgtcgaacggaaaacttctgcgaaacctttcggatgtgcatacgcccaatcatggt
gttttgctactagccttcaccggagacccgaccacggcagtggtcaccgacactggagga
tcagtattcgaggtaaacttcaggaagattctcacatcaagatcgtatgaaagcaactgc
atcttttccggaagtcgaggggaagtgtgtgctatggagccactacgagtagcgtgtaga
ttgcgcggtcatcctatagaggggctgtcactcgtggcccttggaacggttacaaaatgc
atcgttattcttcttcgacctgtcgtcaccgtagtgttcactcaccagcttcgggcggaa
actgacacaataccagtgttgagttggcaattctcgttttttcaagaaggaagccgtaaa
gtctgttctcccgtgctcgcgtttggtcgaaaatctactatctacctatttaaagttcat
acacagagcaaccacaaggtgacatttgagcccctacagcagttggaagtatcatataca
atgagacaactttgctttgtaaactataaaacccttgctattcttgatcatcgggaaagc
ttaaaatttctcgatgttcgactagacgaggaggtagagtcaatggattgctctgatcta
gacattatctatgagggtagtcgctatcgagccgaggacacaggcggaaacgtcagtagg
gctatgactgtaatcggagaaactgcctgtgcaaatacaatggtctcgtttgggagccag
tgtttgattcttggcggacgaggtattcacatctactcgatgaggtcctggactgagaga
gtaaatttcttctccaagcagaaactttattcagaagcactgaagttcgctatttcttat
tacaacgatgaaggcgaggctacgtcatctaatagggtaattgaaatcgtgacaccgaga
accgaaaaaagtcaggctctggtggcggaaaaaatcgcccttttaatcgaagaatttggc
ctttttctcgttgatcgagaaggacaaaagattgataatttattaacgcattacgcggcc
aatgtgccgttgtgcattcactatgcggtgatcctgccaacaaaatatcagatccttgac
acgctttatgagctttttgcacaagacccgatggctcttacagtttttctgtctagtctt
caaccgtacataagtgggggtgatctaccggagttaaatccagttatcgtaaaggatttt
gtcaatttgcttagttgcgaaaataaatttggagagttggagagatcgcttgtacagctg
gccataacttccattgatatacaccaggtaatgagtgtttgtaaagaaaatcgtctttat
gacgctattatctacattcataacgccgcaatgttggactacacggggccaattgaggaa
atggttgacatcattgcagcacctcttgctatgaataaagaaccaaattatgctgagatt
gaggtgggcaacaagctgatggtctacatcagttgctgtttagcaggtgcagcctacccc
tgcggcacgttatcactggccgaagcaagccgtgctcgtgaagcgatcgtgaagtacctc
acaacccctgtgccttcaggatcactacgtcctcccttttattgtctgcgaacacttcta
cacttcaatgctcgggagtttctcaatgttgtatcgctcgcgtttcaagacgagcagctc
agtgcgacagaagagtcaggtgaaactacggaaacccctgagcccccagaagcaatagct
gctactctgggtcaggacaaacaacagatcgtagacatccttttgcaattaatggtgcga
gaagagggtttcgagacacacgaaatgagcgcactttttacctttctcgcaagacagatg
gctaaacaggtagccggtaccggtatccgggttgacaaacagctatttgaacaggtcgtt
gagtatttgactaacgcagacgaggagagtagaatggaggaacggcaacaggccatgatg
gagttattaacgagtggcggattgaaagatatccccattgagcgactgttggaattagct
gaacaagctcgattttaccgtgtctgtgagattctttatgaacagcaaaggcgatttgat
aaagtgcttctctgttatcttaacgaccctgcgcgacgaacaaaaagtttcgcttacata
acccaaatcctaaacggggtggattataaagccgccgaaaagatccagcttgaaaatcaa
gttgtagcagttatcgacgaactgatacaagtggatgcgatgtcaatggccgcacttgtc
attgatcttctgccgaaacggatcaaagaagtgctagatcgtctcgagggaatgcccgaa
acacaataccatttacttgaaggcgtctatcggttggccgctggggagtgtcaggacacg
atcattggagtcaaggacgcagaagcggtcacagtgtctcccgacgtgcaagagaaatat
gtggagcttaagtgcatcttcgaccccgatggcgtgctagcattcctcaaaggagtggaa
tatttccgcgatctagaggttctagccatttgtaaaacccatcgagtatatgaagcaaca
gcatttatacttgaaaagctacgtgaaataccggaggcatttgagagctacctaagccta
gttgagcaacacctcatacagtggcttaggagtcttgatactgcttcgcctcctagcgac
tgctcaaaagtctccgaccaaattggtaaggtcgtctattttcttcagagaaactgcggc
gctttacaggcggatgaccgtgagacaatgtggtttcgtctactagatgtggtaatgaag
ccacagaaagattctttagatcggccagacctaagagaacttacatcgtcgttattgaat
gcaatgatggggcacgtgagtccttactccattcttactaaggtaatgtccgatcctgca
tacaatctcaatgagttccgtgaggtgagacgcttcattggggctatgatagatacttac
aacttcgagcagaccatgttggcgaccacaagcaaccttataaattgtgacctgtcgtgt
aaactcgcagatcttaagcgtcttgctaacagggctgttgtagcaactgtggcaacctgc
gcattttgcaaccgtccttacgccggagctgatactcgagaagttatcgtctttcgttgc
gggcacggttaccatcgtgaatgtgttgaccaaaagtttgaagcacgcacagtaagtgac
ctcaaatgcctccgctgtggtagaatgaattgtacagctttcggattgccgtctgagtct
tcgactcacgctgggaatgctcaagaaggacagaaaggcggtgctgcagctgatggaagt
cgacaagtgagaaagcggcggatcagaacgatcgttcctcgcttgctaccaaaagaagcc
tatacagaaaacaacgaaacgcgatccgtcaccgtttattctacgctttcgccagttcag
atggaagccctcgagcacttcaaaatgacccaaaagatgccgcaagcatcaacatcaaat
gaagaagttcgactcagagcaggtacactgctatcacgtgatgatttcaaactcttcctt
ggcccgtcacccgataaccccgttgcaagggaactcttcagctga
DBGET
integrated database retrieval system
