Varroa jacobsoni: 111267939
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Entry
111267939 CDS
T07417
Name
(RefSeq) TATA-binding protein-associated factor 172-like isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111267939
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111267939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
TPR_Trm732_C
TOR1L1_N
HEAT
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
MCM5_C
Motif
Other DBs
NCBI-GeneID:
111267939
NCBI-ProteinID:
XP_022702291
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MTTTRLDRLFVLLDTGQSAVTRRAAAKQLGELQRLHPHKLNYLLAKVHKYLRSANWDTRI
AAAAAVTAIIENVPSWAPPPVCKAEPNGDDVKPSGGSNSLHANRTRQLRISEFDIDIVMR
TGKHLLGSEGKQFEKNPDNVDGDGSESAEDLARQKKAVSKRLGFDVCEKFGMASDDLFTE
NDLKTDAADESNGGVAEIKKDITEVLQGPGPQPSKKRKFDFDEPDDKSNGSNSSTSTPQA
ALSEADCTEWPLTMFAEALMDDLFKPSWETRHGAATALRELTKLHGTGAGVAKGMTRDEM
VASNQQFLENLALRLVCVLALDKFGDFLSDQVVAPVRETTAQALGFCLRLIEPARVDAFL
DILLKMADSRDSWEARHGGLLGIKYLLAISGQTSSTPVGDNVAPGSGCATVGRDTWLPRV
FGPLFASLQDANDDISAVAAAAFLPIIEDLPRLLPQQILPLSERLWTCLKEMDELSSSTH
SILSLLSHLLPHVCKLRNKTAVENIDDDGPWVSPGKIALLWPFLDHHSFNVRVSVLDSLR
TIAATEGEGSPLVTTQLSPALRLLFQRSLLETEPVATKAVQQVWVSILRSANLSHLLFSA
CPLLAGWLCLTMHPAKMAVDPRQQTVWLETTKSLGKGGEYYIAGKESLAESHVARQRLVL
RARLAACQMLGALSCFVTRRAPGAEYTAPSEGPMECFARLIGFHLASKSALQRTIVALVV
REWIEQRRQKEFLFPDEPLEECPRSISDSVIQCIQEPVLYDEVASTFTRLQQDCRDLIGL
MRHYCLPVDKVGSSLGLPALAACGIGQVLTADQATLLAREVFDEVVSSAKLKQKLLDNLD
EKRRMVLNSAKTAARDHLSLGTMTQAALSTLLVCLPADRLPVKLSPVIKALMESLRREQH
EPLQAMSAKHLALLLQIALSRSPCPNGKVVRNLVTYLCCDPDETPLVTPVQGQYQTDGIM
TLQKMTKTAELMLNKKPWLRRSQSQICPTFPANPLIPVSPSPQAANQQPPEFPSVGTGCT
PLTPAAIDDELQKEQKQSQETQRRGAVLAFGEIGGVFGERLFEDLPTVWEAIAALLLKES
TFGKVEITTTSYQQQLEPTDLSKSGRNKTSPNLLTNLEASTSPSSSNTTTTLATVRGLIE
SLQTLEVLTPSVHKKLHPELRRLLPRLDLCSRHPLAAVRHMAARCIASLAAVDTSATVCH
VIKLGVLSQLGATSQDDIVRQGAVEAIFTLVERLDVRAVPFISFFILPILGAMADQNEHV
RLLATQCFANLVRLMPLDDGVSGLSELFSKDEELRTKAQKQRGFIDQLLNANHAENYKVS
VPVKADLRSYQQEGVNWLAFLNRYRLHGILCDDMGLGKTLQSICMLAEDHDRRQQQYKIN
KHDLSFAPLPSLVICPPTLTGHWVYEIDKFVSAKHLDPLHYTGPPPERQRLQAQFTLRQE
RHRCHNLVVVASYDLVRNDIDFFSAIRWNYVILDEGHVIKNNKTKLSKAVKQLRASHRLI
LSGTPIQNNVTELWNLFDFLMPGFLGSEKLFSVKYAKPILASREAKASSKEHEQGILAME
ALHRQVLPFVLRRTKEDVLADLPPKIIQDYYCELSPLQHRLYEDFSKSRANSEMVEAINR
QAAESSAGAGGAQTNHHVFQALHYLRKVCNHPKLALSQNHPEYDAIVKQLREDKLSLSDI
SVSCKLLALRQLLLDCGIGSELGQAIVNAHRCLVFFQLKSMLDLVENDLLKKYMPTVSYL
RLDGAIPPGDRHALVQKFNNDPSIDLLLITTQVGGLGLNLTGADTVIFVEHDWNPMKDLQ
AMDRAHRIGQKKVVNVYRLITRNTLEEKIMGLQRFKMSIANTVISGDNSSLHTMATDQLI
DLFQVSEPGKSGRPASGSDRDGGNKTGVKDVLDHLPELWDSSQYEAEYDLSAFMKNLVKK
DK
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgactactacaagactggatcgcctgtttgtcttgctagacacgggacaatctgcagtc
actcgtagggcagcggcaaaacaattgggagagctgcaacggctccatccacataaactt
aactatctgttagctaaggtgcacaagtatttgcgcagtgccaattgggatacgcgaatt
gcagcagccgctgccgtgacggcgattattgaaaatgttccttcttgggctcctccgcct
gtttgcaaggccgagccaaatggtgacgacgtgaagccttctgggggtagtaattctttg
cacgcaaatcgaacgcgacaacttcgaatatcagagttcgacatcgatatagtcatgaga
acagggaagcatttactcgggtcagaaggcaaacaatttgaaaaaaatccagataatgtt
gacggagacgggagtgaaagtgcagaggatcttgcacgccaaaaaaaagctgtcagcaaa
cgattgggcttcgacgtttgcgagaagtttggaatggcatcagatgatctcttcaccgaa
aacgacctcaaaacagatgcagcagatgagtcaaatggaggtgttgcggaaatcaaaaag
gatatcaccgaggttcttcaaggcccaggacctcagccttcaaaaaaacgcaaatttgat
tttgatgagcctgatgataaaagcaatggaagcaacagcagcacaagcacacctcaggcg
gctctgtctgaagcagactgcaccgagtggccgttgacgatgtttgcagaggctttaatg
gacgacttattcaaaccgtcgtgggagacaaggcatggcgctgcgacggctttgcgtgag
cttactaaattacatggtaccggcgccggcgttgccaaaggaatgacccgtgacgaaatg
gtggcttcgaaccagcagtttctagagaatctcgcattgaggcttgtctgtgtattggcg
ttagacaagtttggagatttcctttcagatcaggtcgttgcacctgttcgtgagaccaca
gcgcaggcgttaggcttttgtttgcgtttgatagaacctgcgagagttgatgcctttctc
gacattcttctcaaaatggctgactcaagggactcgtgggaagcgagacatggcggatta
ctaggtattaaatatctcttagctattagtggccagactagcagtacgcctgttggcgat
aacgtggccccaggaagtggatgtgctaccgttggccgagatacgtggctacctcgggta
tttgggccacttttcgcgagtcttcaagacgccaacgacgatatatcagcggtggctgcc
gcagctttcttaccgatcattgaggatttgccgcgtttacttccgcagcagatccttcct
ctgtccgaacgactctggacatgtttgaaggagatggatgaactttcgtcatctacgcac
tcaattttaagcctcctgtcgcatcttcttccacacgtttgcaaattaaggaataaaaca
gcagtagaaaatatcgatgacgacggaccctgggtttcgccaggaaagatcgctttactt
tggccatttcttgaccatcattcgtttaatgtgcgtgtgtcggttctcgactcacttcga
actattgctgctacagaaggcgagggcagcccactggtgacgacgcagctatcgccggct
cttcgattgctgttccaacgttccttgcttgagacagaacccgttgcaaccaaagctgtt
caacaggtgtgggtatcaattctgcggagtgccaatctctctcacttgcttttctccgct
tgtcccctcctcgctgggtggctttgccttacaatgcatcctgccaagatggctgtggat
ccaagacagcaaactgtttggttggaaacaacaaaatccctcggaaagggcggagagtat
tatattgctggtaaagaatctttagcggagtctcacgttgctcgtcaacgccttgttttg
cgggcccggcttgcagcatgtcagatgttgggagcactgtcctgcttcgtaacaagacga
gcccccggcgccgaatacactgctccttccgagggaccgatggaatgctttgcccgtctg
ataggtttccacctcgccagcaaaagtgcgcttcaacggacgatcgtcgccctagtcgtg
cgagagtggatcgaacagcgccgacagaaggaatttttgtttcctgacgagccgttagag
gaatgcccccgatcgatatcggatagtgttattcagtgcattcaagaacccgttctttac
gatgaggtggcatcgacattcacgcgtcttcagcaggactgccgggatctgatcgggttg
atgcggcactactgtctgccagtggataaggtgggctcatctcttggacttcctgctcta
gccgcatgtggaattggacaagtgctcactgcagaccaggcgacgcttctcgccagagag
gtattcgatgaagtcgtatcgtccgctaagttgaagcagaaattattggataatcttgat
gagaagcgacgcatggttctaaattccgcaaaaaccgctgctagggatcatctttctctt
ggcacaatgacccaagcagcactatcgacgttgctagtctgtcttccggctgatcggtta
cccgtcaagctaagtcccgtgatcaaagcgctcatggaatcactacgacgggagcagcac
gaacctttacaggcgatgtcggctaaacatctggctctcctactacaaatcgccctttcc
agaagcccgtgcccaaatggcaaggttgtcaggaacctggtcacatacctttgttgcgat
ccggatgaaactccattggtaacacccgtacagggccagtatcaaaccgacggcattatg
accctccaaaagatgactaagacggccgagctgatgctaaataagaagccctggttacgt
aggagccagtcacaaatttgtccgacatttccggcaaatccgttaattcctgtcagtccc
tcgccacaagcggcgaaccaacagccgcctgagttcccatctgttggcactggatgcact
ccactcacaccagccgctattgacgacgaactacagaaagaacaaaagcaatctcaggaa
acacagcgacgcggcgcagttctggcatttggcgaaattggtggggtatttggcgagcgt
cttttcgaagacctgcccaccgtgtgggaagccatcgctgctctattactcaaggaaagt
acttttggtaaggttgagataacgacgacaagttatcaacaacaattggagcctacggac
ctctcaaaaagcggtagaaataaaacatcaccaaacttattgaccaatctcgaagcctca
acttcaccatcttcgtctaatacaacaacaacgcttgctaccgtccgtggattaatcgag
tcccttcagacgttggaagtactgactccatcggtacataaaaagctccatccggagctg
cgacggcttttaccgcgtctcgatctctgctcacggcatccgcttgcagcagtgcgacat
atggctgcacggtgcatcgctagccttgctgctgtggataccagtgcaaccgtgtgtcat
gtaatcaaacttggagtcttgtctcagctgggagctacctcccaggacgacatcgtgaga
cagggtgcagtggaggctattttcacgttagtggaacgtcttgatgtacgcgcggtacca
tttatctcgttcttcatcttgcccattcttggtgccatggctgaccaaaatgaacacgtt
cgactcctcgctactcaatgtttcgcaaatctagttcgcttaatgccgctggacgacgga
gtctcaggtctgtctgaattattttctaaagatgaggaacttagaacaaaagcccaaaaa
cagcgtggatttatagatcaactgctcaatgctaatcatgctgaaaattataaggtgtcc
gttccggttaaggcggatttgcgcagctaccaacaggaaggcgttaattggctggcattt
ctaaatcgctatcgattacacggtatactatgcgacgatatgggtttgggaaaaacactg
cagtcgatttgcatgctggccgaagatcacgaccgtcggcaacagcagtacaaaattaat
aaacatgatttaagttttgcaccattaccatcgctcgtaatttgtccaccaactttgact
ggacactgggtgtacgaaatcgacaaattcgtatctgctaaacatctcgaccctcttcat
tatacaggtccacctcctgaaaggcaacgtctccaagcacaatttacattgcgacaggaa
cgccatcggtgccacaacctagttgtcgttgcctcgtatgacctagtgagaaatgatatc
gacttctttagcgccattcgatggaattacgtgatccttgacgagggacacgtcattaaa
aataacaagaccaagctttcaaaggctgtcaagcagctacgtgcaagtcaccgattgata
ttatccggaactccgatccaaaacaacgtgactgaactgtggaatctcttcgatttcctc
atgcccggcttccttggatccgagaaactcttttcggtcaaatacgcaaagccgattctc
gcgtcgagggaagcgaaggcatcttcgaaagaacacgagcaaggcattttggctatggaa
gcgctccatcgtcaggttctgccgtttgttcttcgtaggacaaaagaagatgttctggcc
gatttgccaccgaagatcatccaagattactattgcgaacttagtccactgcagcatcga
ttgtacgaagatttttcaaagtctcgtgcaaacagcgaaatggtcgaggcaataaatcga
caggccgccgagtcgtccgctggtgcgggaggggcgcaaacaaatcaccatgtattccag
gccctgcactacttacgcaaggtgtgtaaccatccgaagctggcattatcgcagaaccat
cccgagtatgatgccatcgtcaaacagctgcgcgaagacaaactatctctttccgatatc
tctgtgtcgtgcaagctgcttgctctccgccagctactgctggactgtggcatcggctca
gagctaggtcaggcgattgtcaatgcgcatcgatgcctagtgttcttccaactcaagtca
atgttggaccttgttgaaaacgatttacttaagaaatatatgccaacggtttcgtatctg
cgtctagatggcgctattcctcctggtgaccgacacgcgctggttcagaaattcaacaac
gatccctcaattgatttgctgctgatcacaacccaagttggtggactaggtttaaatttg
acgggcgcggatacagtcatctttgtggaacacgattggaacccaatgaaggatctccag
gcaatggaccgcgcacatcgcatcggtcaaaagaaggttgttaacgtctacaggctaatc
acacgaaatacactcgaagagaagatcatgggcctgcaaaggttcaagatgtcgattgca
aatacagttatcagtggcgacaattctagtttacacactatggccacagaccagcttatc
gacctgttccaggtttccgagccaggcaagagcggtcgaccagcgtccggcagcgaccga
gatggcggaaacaaaaccggtgttaaggacgtcctcgaccatttgccggagctttgggac
tccagtcaatatgaagccgagtatgatctttcagcattcatgaagaatcttgtgaagaag
gataagtag
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integrated database retrieval system
