Varroa jacobsoni: 111268141
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Entry
111268141 CDS
T07417
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
vja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111268141
03015 mRNA surveillance pathway
111268141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111268141
03041 Spliceosome [BR:
vja03041
]
111268141
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111268141
Spliceosome [BR:
vja03041
]
Complex C
Other components
EJC/TREX
111268141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
111268141
NCBI-ProteinID:
XP_022702647
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MSVGLSVQSLTQELEQTRERLRVVDDDIKKHSGRRNVPASNFRHLRDAPPGLRSQLANRL
DDGPLRRRQQGGAFSRLGRQLNVHEAQRMGQPSPQGPSGSHQGTMSTKDQGRLGSGGSHG
TGSAVGSGLRVGVKRDRSERVEREPPEEGELDEPPRKVGLLSSIGASSMTVKGKSRSELL
NEQSGDQNIKARNRRMFGMILGTLKSFEKEESTKRKEQVDKKVEKEQKVEEQKEREREEA
VRMRRELIEEKRDKQIKLRQLQAKIEVIGAFEEFSKRHGYMANFIHTIAKPPLMWLPRTH
TPASEEGLARSRAKIEAIVAKEQQRIELELERIEGIQRDSEGEIDGKENNSGSTMPSSVA
VVVSNDYKNAEDAHDSRQNGNVDDSTSAKDKSLADSAMKNIKIIIENDLVMKKSVNGKRE
VGEDEDDDEEVVEEKPEDGEIQQQQQRQRQYQQSQQQQQQQQQQQQQQQQQQKQDGDEKH
QQPQQKPKRPDNVDESPRQREIMDSSMDDDNHTMKREEDTVEEASASKSRSKSKSKSRSN
SKSRSSSRSRSRSATPVPKSVSVTQEGELERQDEPIDQDSPNKFLKKTTPPFSEDESVKR
QSGKSMPANESKRMIAAPTGSGGGSPRRSRSPKRVVRQPPTAAVKKKRNSSSSSSSSSSS
STSRSGSSSSSSSSDSSSDGSPQQPAKKPLSAHEGSSASPKKCSKSPTPTPGKRSPPSSR
IRRASSSPPPAPVKRRGSSPPVSRRSPRRRSRSPRRRSPGSSVRRGSIKRRSLSRRRSPS
PRRRRRSSSSRRRSGSGRRRTNRCSGSRGPPRRGSPIRRRTRSRSPRRGGARRSRSPRRR
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgggcctatcagttcagtcgttgacgcaggagcttgaacagaccagggagcga
ctgcgagtcgtcgacgacgacatcaagaagcattcgggccgaagaaacgtgccagcgagc
aatttcagacatctgagagatgcgccgccaggactccggagccagttggccaatcgtctt
gacgatggaccgcttcgtcgtcgacagcaaggaggtgctttcagccgtttggggcggcaa
cttaatgtacacgaagcccagcgtatgggtcagccaagcccacaaggcccaagtggttcc
catcaaggaacgatgtcaacgaaggatcagggtcgtcttggctcgggaggttcccatggg
accgggtcggctgttgggtcaggtcttcgagtgggagtgaaacgtgaccgcagtgagcga
gtcgagcgagaaccccccgaagaaggtgagttagatgaacctccaagaaaggttggtctt
ctttcgtccattggcgcctcctcaatgactgtcaagggaaagagtcggagtgagctgctg
aacgagcaaagcggcgatcagaatatcaaagcacgaaacagacgaatgttcggcatgatc
ctgggaacattaaagagctttgaaaaagaagagagcacaaaacgtaaggagcaggttgac
aaaaaggtcgaaaaggaacaaaaagtcgaagaacagaaagaacgtgagagggaagaagcc
gtccgcatgcggcgggagcttatcgaagagaaacgcgataaacagatcaaactacgacag
ctgcaagccaagatagaagtaatcggagcgtttgaagaattctcgaaacgtcacggatat
atggcaaacttcatccatacaattgcaaaacctcctcttatgtggctgcctcgaactcat
acgccagctagcgaggaaggccttgcacgcagccgtgccaaaattgaagcgatcgtggcc
aaggaacaacagcgtatagagcttgaactagaacgaatcgaaggcatccagagggattcc
gaaggcgagattgatggcaaggaaaacaatagcggatcgacgatgccatctagcgtcgct
gtggttgttagtaatgattacaaaaacgcggaggatgctcacgattcgaggcagaacggc
aacgttgacgatagtacatcagctaaagacaaatctttagcagattccgctatgaagaat
attaaaattattattgagaatgatctcgttatgaaaaagagcgtaaacggtaaacgcgaa
gttggcgaagatgaggacgatgacgaggaagttgtcgaagaaaagccggaagacggagag
atccaacagcagcaacagaggcagcggcagtaccagcagtcgcaacaacaacaacagcaa
caacaacaacagcagcagcagcagcagcaacagcaaaaacaagatggtgacgaaaaacat
caacaaccgcaacagaagccaaaacgaccagataatgtggacgaaagcccacggcaaaga
gagattatggacagttctatggatgatgacaaccatacgatgaaacgtgaagaagacaca
gtagaggaagcttcagcgtcgaagtctagatcgaaatcaaagtctaaatcgaggtccaat
tcgaaatcaagatccagttcgagatctcgatcgaggtcagctacccctgtacccaaaagc
gttagtgttacccaagaaggtgaacttgaacgccaggacgaaccgatagatcaagattca
ccgaacaagtttctgaaaaagacgactccaccatttagtgaggacgagtccgtaaagaga
cagagtggcaaatcaatgccagccaacgaatcgaagcggatgatagctgcccctactggt
agtggtggcggttcaccgcgacgtagtcgatctcccaaaagggtcgttcggcagccacca
actgccgctgttaagaaaaagcgcaactctagctcgtcgtccagttcgtctagtagtagt
tctaccagccgaagtggtagcagcagcagtagtagcagtagtgattcttcatcggatggg
agccctcagcagccagcaaaaaaaccgctaagtgcacacgagggaagcagcgccagcccg
aaaaaatgcagcaagtcgccgacaccgactcctggtaaaaggagtcctccaagttctcga
atcagacgcgccagctctagcccgccaccagctcctgtcaaacgtagggggtcgtcgcca
ccagttagtagacgatctcccagaaggcgcagtcgctcgcctagaagaagatcacctggc
agttcggtgcgccggggtagtataaagcgacgcagccttagccgacgtcgaagtccgagc
ccaaggcgccgccgaagaagttcgtcatcgagaaggcgaagtgggtccggacggaggcga
actaaccgatgcagtggaagccgcggcccacctagaagaggcagtcccattcgacgccga
acacgatcgagaagcccaagacggggcggcgccagacgatcacgaagtcctcgcagacgg
aggtag
DBGET
integrated database retrieval system