Varroa jacobsoni: 111268204
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Entry
111268204 CDS
T07417
Name
(RefSeq) protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vja03036
]
111268204
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111268204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
111268204
NCBI-ProteinID:
XP_022702759
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MDLLSAALDESGIGVEDLQAAGPSQVQQQQQIQHHQPIPTVAQRIQQQHQPVSMTTVTRV
VRAPAKVLTAPASVSHLNNNVTVATYPRPQQQHHQQPVKILLNSQSGRQQVVRQLAPGTR
IVRIAAPSSSLTPGSTPRPPTIIKMASSPTAISSTGSTPNTPRGALRFVRVPASQLTQVA
GPGGSQQIRLVPTSSGGQQRVLIRSSTPPVSLTPVSALATNSEVVRVSSPKMVTRVMTPK
GPAVVQTVRSVQQQAAHSARVVQATLPQQMTSVATTSSTTRVIHTHNPSGGTIIRRVVAV
GGQPTPVRTQATTTPLATRTVTARPSPSMSMGQVVHKVATSSTTTSLGPLVRKVNVNGHT
STPVTTPRATSLVSRSVPHPRSLLVTSRGLAPGSAPPQMRLQVSGSAIGALRNGDSGIPG
PPRQGPPNRPPHHMMDEGQLVPDEEDELGVAETYSDYVPAKLRIGLKHPDPVVETASLSS
VPPPDVHYRLSVDEETIDTGALSALQLESITYACQQHEVILPNGQRAGYLIGDGPGIGKG
RTVAGIIFENFLLGRRRALWLSVSNDLRFDAERDLRDIGATKIDVHPLNKFKYHKITSKR
NGSCKKGVIFATYSSLIGESSSSSSKYRTRLKQLLHWCGGEDFDGVIVFDECHKAKNLYP
AGSSKPTKTGQTVLELQNRLPKARVVYASATGASEPRNMAYMTRLGIWGEGTQFSEFNDF
LNAVEKRGVGTMELVAMDMKLRGMYIARQLSFAGVTFRIEEVALGDRFISTYNKAVRLWI
EARRMFAEAAQLMDADARVKKTMWGQFWGAHQRFFKYLCIAAKVPYVVKVARDAIRDGKC
VVIGLQSTGESRTLEQLEEQGGELTDFVSTARGVFQSLVEKHFPAPNRKKTLALLGLGGS
FLDESEFMPRSSRLSDKDESDAANKKQSSSGGSSDEEDSSSDVSSDDEASVSASDDDLSG
DDFNPFGADNSDGEDDDPWASRGSSRKRKKAVNSEERKPKKAKKEKKEKGKEPKEEKEKR
RRDRSPSPFSEMTQSIIFSKDAGDKAAAMKQQLLAMLDSIGDVLPINTLDQLIDELGGPS
EVAEMTGRKGRVVSDDNGGVSYESRTESDVPLEILNVTEKQRFMSGEKNIAIISEAASSG
ISLQADRRAENRKRRLHITLELPWSADRAVQQFGRTHRSNQVSAPEYLFLISDLAGERRF
ASIVAKRIESMGALTHGDRRAGESRDLSMFNIDNNFGRIALEHTMKAIMGHEKPMVKPPE
DYDGDFFEDCKEGLLGVGLVVKDDGPSSIAVLDKDYNNISKFLNRLLGLKVDLQNALFKY
FMDTMDAVVSSAKREGKFDLGILDLGANADNVKLERTEEFVRSSPTGPTMTELHTVSVER
GMSWEEAIDKYRELYENDEGFYLSNQIRNGHKTVILAVYAGKSNKNSKNKAREKLFRTYR
PNTGLQVKQDTLANIKAKYKFVSPDDAQDSWENQYSSSEHTCSHIYWTGACRKANLGIPC
DAGLRSRTYHVLAGSVFTVWSKVESALSANNMVSFKLQVVRLKTESGLRIVGTMVPPTCV
QSLRTVLTEDAQKTSVKQLKKVPKTEKADDDDD
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctatcggcagcactcgacgaatcgggtattggcgtcgaggacttgcaggct
gctggaccctcgcaagtccaacagcaacagcaaatacagcatcaccaaccgattccaaca
gtagcacagcgtattcagcagcagcaccagccagtctcgatgactacggttacacgggtt
gttcgcgctcctgccaaagtgttgaccgccccggctagcgtttcgcatctcaacaacaac
gttacagtggccacatatcctagacctcaacagcaacatcaccaacagcccgtcaagatt
ctgttgaacagtcagagtggtcgacagcaagtagtacgtcaactagctccaggtacacgg
attgttcgaatcgcagcgcccagcagctcgctcacacctgggagtacccctagaccacca
acaattattaagatggcctcgtcgccgacagcgatatccagtactggttccacaccgaac
actccacggggtgctcttaggtttgttcgggtacccgctagtcagctgacccaggtcgca
ggtcccggaggatcacagcagatccgccttgtgcctacaagttcaggcggtcagcagcga
gttctgatccgaagttcaacaccaccagtgtcactcactccggtgtcggctttggcaaca
aactctgaagttgtacgagtttcaagtccaaagatggttacccgtgttatgacaccgaag
ggacccgccgtcgttcagaccgttcgttctgtgcagcagcaggccgctcattctgcacga
gtggttcaagcgaccctcccgcaacaaatgacatcagtagcaactacgtcttctacaaca
cgtgttattcacacacacaacccatctggtggcacgatcatccgacgcgtcgtcgcggtt
gggggtcagccaacgccggttcgtacacaagcgacgacaactccacttgcaacgcgcacc
gtcacggctcggccaagccctagcatgtctatgggccaggtggtgcacaaagtagcaaca
tcttcaacaactacctccctcggcccgcttgtgaggaaagtgaacgtgaatggccatacg
agcaccccggtgacgacgccccgtgcgacatcgctcgtgtctcgaagtgttcctcatcct
cgatctctgctcgtgacgtcccgaggcctggcaccaggaagcgcgcccccacagatgcga
cttcaggtgtcaggaagtgccattggagctctccgcaatggtgacagcgggatccctgga
cctccgagacaaggacctccgaatcgaccaccccaccatatgatggacgaaggtcagcta
gtgcccgatgaagaagatgagcttggagtcgcagagacctattcagattatgtgcccgca
aaactgcgcatcggcctaaagcatccagacccggtagtcgaaacggcctcactgtcatca
gttcctccaccagacgtacactatcgactcagtgttgatgaggaaaccattgacactggc
gcgttatcggctctccaactcgaatcgataacttatgcatgtcaacagcacgaagtaatt
cttccgaatggacagcgtgccggctatctaattggtgatggtcctggaattggaaaggga
cgaactgtagcaggtattatttttgaaaattttcttctcggccgaaggagggcactgtgg
ttatcggtatcgaatgaccttcggttcgatgccgaacgcgaccttcgtgacattggcgca
acgaaaattgacgtgcacccattaaataagttcaaataccataaaatcacgagcaaacga
aacggatcgtgcaagaaaggagtgatctttgcaacgtactcgtcgctaattggcgagagt
tcatcaagttcgtcgaagtatcgaactcgcctcaagcagctccttcactggtgtggcggt
gaggattttgacggcgtaatagtttttgatgaatgccacaaagcgaagaatctttacccg
gccggatcatctaaaccgacaaagacgggacaaaccgttcttgaactacaaaatcgtctg
ccgaaggctcgagtcgtttacgcatctgcgacaggagcgtcagagcctcgaaatatggct
tacatgacgcgactaggcatatggggtgaaggcacgcaattttccgagttcaacgacttc
cttaacgcggtagagaagcgtggagtaggaaccatggaactcgtggcaatggatatgaaa
ctccgtggaatgtacatagctaggcagctttcttttgcaggggtgacctttcgaatagag
gaagtggcactaggagatcgtttcatatccacctataacaaggcggttcggctttggatc
gaggcgcggcggatgtttgcggaagctgcccaactcatggatgctgatgccagggtaaag
aagaccatgtggggccaattctggggcgcccatcaaagatttttcaagtacctttgcata
gcggctaaggtaccatacgttgtgaaagtggctcgtgatgctattcgagatggcaaatgt
gttgttattggtctacaatcgacgggcgagtcacgtacgctagagcaactagaagagcag
ggcggagagttaaccgatttcgtttcgaccgcacgaggtgttttccaaagcctcgtcgag
aagcattttccggctcccaacaggaaaaagacgctcgccttgttggggcttgggggttcg
tttcttgacgagagtgaattcatgccaaggtcaagtcgtctttcggataaggatgagtcc
gacgcggcgaacaagaagcaaagctcgagtggtggttcgagtgacgaagaggactcaagc
tcggacgtgagttcggacgatgaagcgtccgtatccgcttctgatgatgaccttagcggt
gatgacttcaatccgtttggagcggacaacagtgacggagaggacgatgatccctgggct
agcagaggctcaagtcgaaagcggaagaaagcggttaattcagaggagaggaagcccaag
aaagctaaaaaggaaaagaaagaaaaaggaaaagagcccaaagaagagaaagagaaacga
cgccgggaccgatcaccgtcacctttttctgaaatgacccagtcgatcatattcagcaag
gacgctggcgacaaagcggcagccatgaaacagcagctgttggctatgctcgattcgatt
ggtgacgtcctacccattaacacgctggaccaactgattgacgagcttggcgggccaagt
gaggtagctgaaatgactggccgcaagggacgcgtagtcagcgatgataatggcggtgta
tcgtacgagtctcggactgaaagtgatgtcccactggagatactcaacgtaacggagaag
cagcgcttcatgagcggtgaaaagaatattgctatcatttccgaagcggcctcatcaggt
atctcgctacaggccgatagacgtgcagaaaataggaaacgacgtttacacatcacgctc
gaactgccgtggagtgctgatcgtgccgtgcagcagtttggtcgaactcacaggtcgaac
caagtgtctgccccggaatacctattcttgattagcgatcttgcaggtgagcgtcgtttc
gcctcaatcgtagctaagcgaattgaaagtatgggtgcactaacgcacggcgatcgccgt
gctggtgaatctcgagatctgtcgatgtttaacattgataataatttcggccgcatcgcg
cttgaacacacaatgaaggcgataatgggtcacgagaagccgatggtaaaaccgcctgaa
gattacgacggggatttctttgaagactgtaaagaaggacttcttggagttggtctggtg
gtaaaagatgacgggccatcatcgatcgctgttctggataaagattataacaacatctca
aaatttctcaatcgcctactcggcctcaaagttgacttgcaaaacgctttgttcaagtac
tttatggacacgatggatgctgttgtgtcaagcgcaaaaagagagggaaaattcgatctg
ggcattcttgacctcggcgcaaatgctgacaacgtgaagttagagaggactgaagaattc
gttcggtcttcaccaactggccctacgatgaccgaacttcacacagtcagtgtcgagcga
ggtatgagctgggaggaggctatcgataagtatcgggagctctacgaaaacgatgagggt
ttttacctgtcaaatcagattcgaaacggccataagacggttattcttgccgtatatgcg
ggcaaaagcaataaaaacagtaaaaataaagcacgggaaaagctcttccgtacatatcgt
cctaacaccggtctgcaggtaaaacaggacactctggcaaacatcaaagccaagtacaag
tttgtctcgcctgacgacgcccaggactcatgggagaatcagtattcgagctcggaacac
acctgttcacacatctactggactggtgcatgtcgtaaagccaatctcggcataccgtgc
gacgccggtctgcgctcacgaacctatcatgtactagcaggttcagtgttcactgtgtgg
tccaaggtcgaatcagcactttccgccaacaacatggtgtcgttcaagctgcaggtcgtc
cggttgaaaacggaaagcgggctgcgaattgtcggcacaatggtgcctccaacgtgtgtg
caaagccttcgaacggtcctcactgaggacgcacagaaaaccagtgtgaaacagttaaag
aaggtgccgaaaacagagaaagcagatgatgatgatgattaa
DBGET
integrated database retrieval system
