Varroa jacobsoni: 111268320
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Entry
111268320 CDS
T07417
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111268320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111268320
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111268320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
111268320
NCBI-ProteinID:
XP_022702959
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MDQQQQQQQTMPSSRERIETSMGLLMAHMQRDKASSQLIDALGGQACFTNPSRSGLSETD
YIKLPLGQIVREENRTTLPPELVQHFQRMRCQFQTGVFAEIQRAWAAVDSDLVIWNYRTG
KGVVYYDGIENVILAVDLVRPKPNIFRSHVHYLLAVATPSEVAILGVTLAENSANNDIEL
HFVNEPLYSYPLENIVVTKIKGARNGRIFLGGQDGSLYEFSYFAQRGWLQSLCKLTNCSS
RFPLLNNLLPALFRGSDPVTEICIDNARQILYTLSDKGIISVYDLGQDGQEMIYVASAGE
DTLLKTVTDCVPTQIRRVIHLESLPVDEAGAVHLVAFTQSGARIFLTTCEPATKTGRPCL
LLTLHVRLPLALPHKITKISNGLNIESASLMIDQQNENRHFLIAVDHFAHFRRANQFVET
YSFMVVDRNIWSISPADTPGRRKRQGSHNSLSRFVMVSLAGCQIISMMTPTEQLRHLLSE
SRGALHDDPIKTFFAYYNYLEGCVMCLQLICDGDIVPQVSRWASEAFNYYGGEPQLDVAL
TMPSSSGFRQPFPNTHPQETMMNSMNIPFQHQQQQQPYAGAGGQFSAPHTMSTPFRPPPY
MNTQFIPVSPIGPTAATYMQHPGIHPYTGDMSRQNQQMPSQMPQQQQQALTHQPGQLQGQ
IIDNNNPPGSMTGLTTNFQSLNQSFAHSFKHDSIFVYFSRILRPIFESQLAKEAPPHAGE
RARLSLVLTSAALTPVLQQLHGFKTFLHDFCNAPGGSNMYIRSQVLPATDAMQWKRKAIL
EEQNSVNNLLVLVTHTMEVLNLWRVTAEHDIEAISLNMKPELFNYLKAITVREFILCDKQ
LLSALATSIVDSYLRDGATTAVVSNKLKEFCPSIYGNEDALYTEAYEMLTKASEITNERE
KEEMLKQALQLCRKVSVQALHLSMVCRILDSSRYYEGLLNICLWAAHNVDPHNFAYDHYE
HGEPQDDDRGRKAYIARRECYQLVTAMLDGLYRKVRPQDQLDPGENNVANQQKYDEMLTR
CIESQDPLLHMCVFDWLLATDQREKLINLRSKGLEKYLRHRTEREPTSITTLELLARHHE
VHKKLESAVHMWLNLANWQGELPLEIRTTYLARASLCAQSGGTNELQQQVDETLEVARIQ
EEIARHLPNNEREAISMRLYPINELYTQFAEKYDLPECQLRLLMCVEHADVNLINFLWTK
LIEQASRKNDLPGVLRKACLVFKDGRNFFPVELIVAHCERIALNTQVDPLWLANILAECG
KDWPSIERIYYDLYQRPQMRGMREHLMIISTRIIYKMADCTDLIPQAEFRPVINVLNGHI
DTYLVDTQARITDNNMRALNNDLQRCRSMLVRAAQQFGNPAN
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacagcaacagcaacagcagactatgcccagttctcgtgagcggatcgagaca
tcaatggggcttttgatggcgcacatgcaacgtgataaagcctcatcccagctaatcgat
gccctcggagggcaagcctgttttactaatccaagccggtcaggtctcagcgaaacggac
tatattaaactgccgttaggtcaaattgtccgcgaagagaaccggactacgcttccgccg
gagctcgttcaacacttccaacgaatgcggtgccaatttcagacgggagtgttcgcggag
attcaaagggcatgggcagctgtcgactccgatttggttatttggaactatcgcactggt
aaaggcgttgtctattatgacggtattgagaacgtaattctggcagtcgatctggtccga
ccaaaaccgaacatattcagaagccacgtccactacctgctggctgtagcgactccctcc
gaagtggcaatactcggtgtgacactggctgaaaactcggccaataatgacatcgagctt
cattttgtcaatgaaccactttatagttatccacttgaaaatattgtcgttacgaaaatt
aagggcgcacgaaacggccgcatttttctagggggtcaggatggttcgttatacgaattc
agttatttcgcccaacgcggctggctccaatcactctgtaaattgacaaactgttcttca
cggttccctctgctcaacaacctgctaccggcactcttccgtggctcggaccctgtcact
gaaatctgtatcgataacgctcgccaaattctgtacacactctcagataaagggatcatt
tctgtctatgatctcggtcaggatggtcaagagatgatctatgtcgcttcagcgggtgag
gataccctgctgaaaacagtaacagattgcgttccgacacaaattcgtcgagtgattcac
ctcgaaagtttaccggtggacgaagctggcgccgttcatctggtcgcgttcacgcagtcc
ggtgcgcggatctttctaacaacgtgtgaaccggcaacaaaaactggaaggccatgtctc
ttgttgactctgcatgttcggttaccattggcattgccacataaaattaccaagatttca
aatgggctcaacattgaatctgcgtcgttaatgattgaccagcaaaacgaaaacagacac
ttcctcatcgcagttgaccatttcgcgcatttccggcgcgcaaatcaattcgtcgaaacg
tatagctttatggtcgtcgatcgaaatatttggtcaatttcgccagcggatacgccaggg
cgtcggaagcgtcagggcagtcacaattccctatcacgcttcgttatggtgtctctcgca
ggctgtcagatcatctcgatgatgacgccaacggaacaacttcggcacctcttaagcgag
agtcgcggcgccctgcacgacgatccgatcaagacgttcttcgcgtattataattacctc
gaaggatgcgtcatgtgcttgcagttgatttgtgatggcgatatcgtcccgcaggtgtca
cgttgggccagcgaggcattcaattactacggcggtgagccccagcttgacgtagcactc
acgatgccgagctccagtggattccgtcagccgttcccgaatacgcatcctcaggagacg
atgatgaactcgatgaacatacctttccagcaccagcaacaacagcagccgtacgcgggt
gcaggcgggcagttcagtgcgccacacaccatgagtacgccatttcgcccgcccccctat
atgaacacacagtttattcctgtgagtccaattggcccgacagctgccacgtatatgcaa
catcccggtattcacccatacactggagacatgtcaaggcagaatcagcaaatgccatcg
cagatgccgcagcagcagcaacaggcgcttacgcaccagccgggacaattgcaaggacaa
attatcgataacaataatccaccagggtcaatgaccggtctcacgaccaacttccaatcg
ctcaaccagtcatttgcacactcattcaagcatgactcaattttcgtctatttctcgagg
attcttcgaccgatcttcgagagccaactggcgaaggaggccccgccacatgccggagaa
cgggcgcgactttcgctggtgcttacatcagcagcactcaccccggtacttcagcaactg
cacggctttaagacgttcctacacgatttctgcaacgcccccggtggctcaaacatgtat
attcgctcacaagtgttgcctgccacggatgctatgcaatggaagcgaaaagcaatcctc
gaagagcaaaactcagtgaacaacttacttgttctcgtcacgcacacaatggaagttcta
aatttatggcgcgtaacagccgaacatgatatcgaagcgatttcacttaacatgaaaccg
gaactattcaactatctgaaagcaatcactgtgcgggaattcattctatgcgataagcag
ttactgagcgcgctggcgacatctatcgttgattcatatttgcgtgacggtgcaaccacg
gcagtcgtttctaataaacttaaagagttctgtccatccatctacggcaatgaggacgcg
ttgtatacggaggcgtacgagatgctcacaaaggctagtgagatcacgaacgagcgcgag
aaagaggagatgctcaagcaggcgctccaactctgtcgaaaggtctccgtgcaggcgttg
cacctatcgatggtctgccgcatcctcgactcgtcccggtactatgagggtttactgaat
atctgcttatgggctgcccataatgtggacccacacaatttcgcgtacgaccactatgaa
catggtgaaccgcaagacgacgaccggggccgtaaagcgtatattgcgcgcagagagtgc
tatcaactcgtgaccgcgatgcttgacggactctaccgaaaagtacgaccccaagatcag
cttgaccccggggagaataacgtggctaaccagcaaaagtacgatgaaatgttaacgcgg
tgcattgagtcacaggatccgcttcttcatatgtgcgtattcgattggcttctcgcgacc
gatcagcgtgaaaaactaatcaatttacgatcgaaaggcctagaaaaatacctgcgacat
cggaccgaaagggagccaacctcaatcacgacgctggagctgcttgcccgccatcacgaa
gtccacaaaaagctcgagtctgctgtgcatatgtggttaaatctggccaactggcaaggt
gagctgccactggagattcgcacgacgtacctagcaagggcatcgctctgcgcacaatcc
ggtggaaccaacgagcttcaacagcaggtggatgagacgcttgaggtggcgagaattcaa
gaggaaatcgctcgtcatttgccaaacaacgaacgcgaagcgatctcgatgcgactgtac
ccgataaacgagttgtacacgcagtttgcggagaagtacgacctccccgagtgtcaactc
cgtctgttaatgtgtgtcgaacatgcggacgtaaatctgatcaacttcttgtggacgaag
ctcattgaacaagcatcaagaaagaatgatctgcctggtgttcttcgcaaggcatgtcta
gtgtttaaggacggacgtaacttcttcccagtcgagcttatagtcgcgcactgtgaaagg
atagccctcaacacccaagtcgacccattgtggctagctaatattcttgctgagtgcggc
aaagattggccgtcgatcgagagaatctattatgacctgtaccagagaccgcaaatgcga
ggtatgagagagcatctaatgatcatatcaacgaggattatttataaaatggccgactgt
actgacctgattcctcaagctgaatttcgccctgttattaacgtcctaaacgggcacatc
gacacttacttggtcgacactcaggcccgtattacagataataatatgagggctcttaac
aatgaccttcagcggtgcagaagcatgcttgtgcgtgctgcccagcaattcgggaatcct
gccaattag
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