Varroa jacobsoni: 111268406 Help Entry 111268406         CDS       T07417                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism vja  Varroa jacobsoni Pathway vja03030   DNA replication vja03410   Base excision repair vja03420   Nucleotide excision repair vja03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vja00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     111268406    03410 Base excision repair     111268406    03420 Nucleotide excision repair     111268406    03430 Mismatch repair     111268406  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vja03032]     111268406    03400 DNA repair and recombination proteins [BR:vja03400]     111268406 Enzymes [BR:vja01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      111268406     6.5.1.6  DNA ligase (ATP or NAD+)      111268406     6.5.1.7  DNA ligase (ATP, ADP or GTP)      111268406 DNA replication proteins [BR:vja03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     111268406  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      111268406 DNA repair and recombination proteins [BR:vja03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      111268406    NER (nucleotide excision repair)     Other NER factors      111268406    MMR (mismatch excision repair)     Other MMR factors      111268406 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ThiN Motif Other DBs NCBI-GeneID:  111268406 NCBI-ProteinID:  XP_022703120 LinkDB All DBs Position Unknown AA seq 926 aa AA seqDB search MFYSVLRIAPLVSRLPLVSCLFVDSSGFPPFRFGAIFIYFFCQRRLSDLQVTSGRAAGQI CCLDESVIGSLNRKMSQAKISSFFSRKKDIVGNSKQEISSKKELEEDVINNRATGANSDC DSPVKPLKEKRKSRILDDSSEDEPSPSKRSPNENRAPTKESKLAKNVGSKKSPGKKTGAK RRLSPGSVDEKMPASKRISTVDNSDDSHGDKCEGKRTSQTQDREKDQEKDTKTPILPKAK SEKDDVKEDSNEKSPKTVKERPKKTMAFDSGVRVDDLSPNDYRPDKEKYDPVKDATWKEG EKVPYLAFCQTLNRIDENSSRLKMIEILRNFFWSCLALSPNDLIFGVYLCLNKTAPDYEG QELGIGDSLLMKAIAEVTGRTLDAIKKEVHVKGDLGMVAESSKTNQKMIFAPPKLLLCNV FAKLKQITQLSGQSVQSKKVDMIKSMFVACRGSESKFLIRSLTGKLRIGLAESSLLTALA HAIILYNQPELAKTLGTESTKKVLEEATLALKTVYCECPNYDKIVQVVLKDGFEALPEKC KITPGVPMKPMLAHPTKGVTEVLKRFENMSFTCEFKYDGERAQIHMMEGGKVSIFSRNQE NNTTKYPDIIQRIIKNIKEGVIDFIMDSEAVAYDREKKQILPFQTLMHRKKKDVDHGEII VQVYVFAFDLLYLNGKSLVKEPFRERRRLLREHFHEVEGEFGFAANADLENVDDIQEYLE ESVKGNCEGLMVKTLDKEATYEIAKRSHNWLKLKKDYLEGVGDTIDVVVIGGWKGKGKRT GTYGGFLLACYDPESEEFQSLCKIGTGFKEEELEQHTNFFKDYVLEKPKPYYNVDSSLQP DDWFDAVQVWEIKCADLSISPLHKAAIGLVDPEKGISLRFPRFVRIRDDKNPEDATHAQQ IASMYRSQEQIKNAGPSGTNDEEDFY NT seq 2781 nt NT seq  +upstreamnt  +downstreamnt atgttttacagcgtgctccgaatagcgccacttgtttcacgattaccgttagtgtcgtgc ctttttgttgatagcagtggtttcccaccttttcgctttggcgccattttcatttacttc ttttgtcaacgaaggttatctgacctgcaagtgaccagtggacgggcagccggtcaaatt tgttgtcttgacgaatctgtcattggctctttaaatcgaaaaatgtcgcaggcgaagata tcatcatttttttcccggaaaaaagacattgtcggtaattctaagcaggagatttcatcg aagaaggaattagaagaggacgtaatcaacaatcgtgccaccggtgctaatagtgattgt gattcgccagtgaagcctttgaaggaaaaacgaaagagtcgaatattagatgacagcagc gaggatgaaccgagtccgtcgaaaaggtcaccgaatgaaaacagagctcctacaaaagaa agcaagcttgcgaagaatgttggcagtaaaaaatcgcctggcaagaagaccggagctaag cgtaggctaagcccaggctcagtcgacgaaaaaatgcctgccagcaaacgaatttcaaca gttgataatagtgatgacagccacggtgacaagtgcgagggaaaacgaacaagtcaaacc caagatagagaaaaggatcaggaaaaggacacgaagactccaattttacctaaagcaaaa tcagagaaagatgacgtcaaagaagacagcaacgaaaaatcacccaagaccgttaaagag agacccaagaaaacgatggcgtttgacagtggtgttcgtgttgatgacttaagcccaaat gactatcgcccagacaaggagaagtacgatcccgttaaagacgccacttggaaagaagga gagaaagttccttaccttgcgttttgtcaaacgcttaaccgtattgatgaaaattcatcc cgtcttaaaatgatagaaattcttcgcaatttcttttggagttgcctggctctatcgccg aatgatttaatttttggagtatatctgtgcctgaataaaacagccccagattacgagggt caggagctaggcataggcgactccctgttgatgaaagctatagctgaggtgacgggaagg acgttggacgcaatcaaaaaagaggtccatgttaagggtgacctgggcatggtagcagag tcatccaaaacgaatcagaagatgatatttgctccacccaagttacttctgtgtaatgtt ttcgctaagttaaaacaaattacacaattaagtggacagagcgtccaaagtaagaaggtc gacatgattaaaagcatgtttgtggcttgccgcgggtctgaatctaaatttcttatcagg tcgctgactggaaagctccgaataggtctcgcagagtccagccttcttacagctttggcc catgctatcattctgtacaatcaacctgaacttgcgaaaacgttgggtactgagtcgaca aagaaagtccttgaggaagctacactggccttaaaaacggtatattgtgagtgtccgaac tacgacaaaatagttcaagtggttctgaaggatggtttcgaggctttgccggaaaaatgt aaaataactccgggtgtgcctatgaagcccatgttggcgcatcctactaagggagtgaca gaggttctaaagcgattcgaaaatatgagttttacgtgtgaatttaagtacgatggtgag cgtgcgcagatccatatgatggagggaggaaaagtgtcaatattttccagaaatcaggaa aacaatacgacgaagtatcccgatatcattcagcggattattaagaatataaaagaagga gtcattgattttatcatggattccgaggccgtggcgtatgatcgtgaaaagaaacagatc cttcctttccaaacactgatgcatagaaagaaaaaggatgttgatcatggtgaaattatc gttcaggtttacgtgtttgctttcgacttactgtaccttaatggtaaatcgcttgtgaag gaacctttccgcgagaggagacgtttgttaagagagcatttccacgaagtcgaaggcgag tttgggtttgcagccaacgctgatcttgaaaacgttgatgatattcaagaatatctagaa gaaagcgttaagggcaactgcgagggtttgatggtaaaaacacttgataaggaagcgact tacgagatagcaaaacgttcccacaactggcttaagctaaagaaggattacctagaaggt gtaggagatacgatcgacgtcgttgttatcgggggttggaagggaaaaggcaagcgaaca ggaacgtatgggggattcctgctggcatgttatgatccagagagcgaggagttccaatcg ctatgcaagatcggtacaggcttcaaagaggaggagctagaacagcacaccaacttcttc aaggattatgtactcgaaaagcctaaaccatattacaatgtggactcttcgcttcagccc gatgattggtttgatgctgtgcaggtatgggaaatcaagtgcgctgacctgtcgatttct cctctacacaaagccgctattggattagtagatccagaaaaaggaatttcgcttcgcttt ccgcgttttgtcagaattcgtgacgacaaaaatcctgaggacgcaacacacgcgcagcaa atcgctagcatgtaccgaagtcaggaacagatcaaaaacgctgggccttcaggaactaac gatgaagaagatttctactag

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