Varroa jacobsoni: 111268489
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Entry
111268489 CDS
T07417
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
vja
Varroa jacobsoni
Pathway
vja04080
Neuroactive ligand-receptor interaction
vja04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111268489
04082 Neuroactive ligand signaling
111268489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vja04040
]
111268489
Ion channels [BR:
vja04040
]
Ligand-gated channels
GABA-A
111268489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111268489
NCBI-ProteinID:
XP_022703244
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MQMEQVLMHQEGTAVSPSAALPARLQTDNPNKIQADPYNNLNGIIRRRTASWTSRILLPL
LTLLAALQVAQSHKTKTSDFYELRPGQTERGQNITHILNSFFTKGYDKRVRPNYGGPPVK
VGVSMQIVSISAVSEVQMDFTSDFYFRQSWRDERLSFPETNELSQMTVGAEVAGKIWVPD
TFFANEKTAYFHIATTPNTFLRIGSDGDVYRSIRLTVTASCPMDLRYFPMDRQSCTIEIE
SFGYTMSDIRYSWRDGEKSVGISEEVQLPQFKIQGHVQKASEISLSTGNYSRLICEIRFV
RSMGYYLIQIYVPAGLIVVISWVSFWLHRNATPARVALGVMTVLTMTTLMSSTNSQLPKI
SYVKSIDVYLGTCFVMVFASLLEYAAVGYLGKRVAMRKSRAQQLARFQDRKRQQRVLRQL
GPSVDEMSPENDPLLTKNYNFNFTAQAPWGGGATAPTPSYRPSTHQTREHSSAHQRDRTH
LDGRKTSHMSLSGGGHLNPNGRERDAVSGGLKLHHTEDEIEKQIRSEHYSSSNPGGGTQL
AGTGSANLNMKLNSVTPRGPTSSLPTGGATISYYNTINSKHLLGERQPQSNHNNSSNLNI
MSNANLINSNYNMTNNVNMFNMNMLDNHYNLNVNNYLNQQMNSLNLSNLANGGQSGGGNG
GGGGGHNIAGNNIGPPPSHYATMPLPTHHREGRSRLTTIDHLNNSIINPLAMDEMRLGGL
NQCDSKVSRKASLSPDAIGGGSIGGGALLSPGVESVLLQNPNKLCGVNPSDIDKYSRVVF
PVCFVCFNLMYWVIYMRISDVKYAEPTVLH
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggaacaggtgctcatgcaccaagagggcacagccgtgtcgccatctgcagcc
ctacctgctcggctacaaacggataacccaaacaaaattcaagctgatccgtacaataac
ttaaatggcataataagacgacgcacagccagttggaccagcagaattctactcccgttg
ttgacgctactggccgcattgcaggtggcacaaagccataaaacaaagaccagcgacttc
tacgaattgagacctgggcaaactgagcgcggtcagaatatcacgcatatactcaactcg
ttctttacgaaaggctacgataagcgagtcagacccaattacggaggtcccccagtaaaa
gtaggcgtcagcatgcagatcgtcagtatcagcgccgtctccgaagttcaaatggatttc
acgtcggatttctactttcgtcagtcatggcgagacgaacggctctcgttcccggaaacg
aacgagctgagtcagatgaccgtaggcgcagaagtcgcaggcaagatttgggtaccagac
acctttttcgccaatgagaaaacggcctacttccatattgccacgacacccaacactttc
ctccgtatcggatctgatggagatgtttacagaagcattaggttaacggtaacggccagc
tgtcccatggatctccgatactttcccatggatcgacaaagctgtaccatcgaaatagaa
agttttggatatacaatgagtgatattcggtattcgtggcgcgacggtgagaaaagcgtg
ggcatctcagaggaagtacaattgccccagttcaaaattcagggccatgtacagaaagct
tctgagatctctctgtcgacaggcaactactcacggctcatctgtgagattcgcttcgtc
cgttcaatgggttattacctcattcaaatctacgttccagctggactcatcgttgtaatt
tcatgggtatcattttggttgcaccgaaatgcaactccagctcgtgtagcgctcggtgta
atgacagtcctcacgatgaccactcttatgtcaagcacgaactcacagctgcctaaaatc
tcttacgtcaaatctatcgacgtctacctgggaacctgctttgtcatggtattcgcgtcc
ctattggagtacgcagccgttggctacctgggcaagagggtcgccatgagaaaatcgcga
gcccagcagctagcgcgcttccaggatcgtaagcgacagcagcgggtcctccgacagctc
ggaccaagtgttgatgagatgagccctgaaaacgaccctttgctgaccaagaactacaac
ttcaacttcacagcacaggcgccatggggtggaggagcaacggcacctactccatcgtat
cgtcccagtactcatcagacacgagagcacagttctgctcatcagcgagatcgaactcac
ctcgatgggcgcaaaactagtcatatgtcattaagtggaggtggccatttaaatcccaat
ggtagagaaagggatgctgtttcaggtggtttaaagcttcatcatacagaggatgaaata
gagaaacaaatccgaagcgaacattattcgtcttcgaaccccggaggaggtactcagttg
gccggtacaggatccgccaatttgaatatgaagctaaacagcgtgacgccgcgtggtcca
acttcatcgcttccaaccggcggcgcaacaattagttactacaatacaataaatagcaaa
catctccttggcgaacgtcagccgcagagcaatcataacaactcgtcgaacctaaacatt
atgtccaatgctaacctgataaatagcaattataatatgacaaacaatgtaaatatgttc
aatatgaacatgctcgacaaccactacaaccttaatgtaaacaactatctcaatcagcag
atgaacagccttaatctaagcaatctggccaatgggggccaaagtggtggcggcaacggc
ggcggtggcggcggccataacatagctggcaacaatatcgggcctcccccatcccattac
gcgacaatgccgctgccgacccaccatcgagaaggcaggtcacgacttacaacaatcgat
cacctgaacaactctattataaacccactcgcaatggatgagatgcgattgggaggtctg
aaccaatgtgactctaaggtatctcgtaaagcgtcactctcgccggatgctattggcggc
ggcagtattggcgggggagcgcttctaagtccgggcgtggagtcggtccttttacagaac
ccgaacaagctttgcggggtcaatccgagtgacattgacaaatattctcgagtcgtattc
cccgtgtgcttcgtctgcttcaacctgatgtactgggttatctacatgaggatctccgac
gtgaagtacgcggaacctactgtgctccattag
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