Varroa jacobsoni: 111268558
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Entry
111268558 CDS
T07417
Name
(RefSeq) probable nuclear hormone receptor HR3
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vja03000
]
111268558
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
vja03310
]
111268558
Transcription factors [BR:
vja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111268558
Nuclear receptors [BR:
vja03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111268558
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111268558
NCBI-ProteinID:
XP_022703353
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MGSPESWMSNPNVFGKMELTVSAGGDAVSGGLIEVSSSDGMTLLPVGPTGSSGGACGQPN
WKLEPQKALKSQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNC
VVDRVNRNRCQYCRLQKCLALGMSRDAVKFGRMSKKQREKVEDEVRFHRAQQTRPASATS
ETAPDSSVSIFEPQPSGLSQFPQSAAISQPQLQQQQQQQPVSNSGYFPEEITTHFYGAND
YEVSNNLCSSSFDVSDFGSNPRSVEPSPLAKEDICQSSAGPALTPSPTPVTPVSAVPAAV
PGSGHPAPHLELLCKTVSDAHTRTCLFSSEEISLKVQTLRSNPSLSLSKIDHLKTMTQED
LWLDCSHKLTSLIQQIIEFAKMIPGFMKLSQDDQIVLLKAACFELCLLRMTRYFDAESNC
VLYGDTLLPEDVFHTCDTLEIKLVSGIFELVRSLARLQLNDTQLALYSAFVLVSPERPGL
KGTAEIERVSSALLKCLRIEATRERHLGITIKGDQGLVEHLLLQLPKLRDLSRCHLEALS
NLKLRSPALHMPPLHKELFSSDP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtccggagagctggatgtcgaatccaaacgtgttcggcaaaatggagctgact
gtgtcggctggcggcgacgccgttagcggcggcctcattgaggttagttcgagtgacggt
atgacgctgttacccgttggaccgacgggcagttcgggtggagcctgcggccagcctaac
tggaaactcgagccacaaaaggctctcaaatcgcagatcgagatcatcccatgcaaggtg
tgcggtgacaagagctcaggggtgcattacggcgtgatcacctgtgagggctgcaaaggt
ttctttcgacgatctcagagctcagtcgtgaattatcagtgtcccagacagaagaactgt
gtggtcgatcgggtcaacagaaacaggtgtcaatactgcaggttgcagaaatgtctcgct
ctcgggatgagcagggacgccgttaagttcggtagaatgagcaagaagcagcgagagaag
gtcgaagatgaggttcgtttccaccgagcacaacaaacccgccctgccagcgccacaagc
gagacggcaccagattcaagtgtgtccatcttcgagccacaaccgtccgggctcagccag
ttccctcagtcggctgctattagtcaaccgcagcttcagcagcagcagcagcagcaacca
gtttcgaactccggctattttcctgaagagatcacgacccacttctacggtgccaacgac
tacgaagtctccaataacctgtgctcgagcagtttcgacgtgtcggacttcggttcgaat
ccgcgctcggtcgagccgagcccattggctaaggaggacatttgccagtcgtcggcaggt
cctgcattgaccccttcgcctacaccggtgacgccggtctcagctgtgcctgcggccgtt
cccggctcgggccatccggcgccccacctcgagctactgtgcaagaccgtctcggacgcg
cacacccgtacctgtctgttcagctcggaagagattagcctcaaggtgcagactctccgc
tcgaatccgagcctgagcttgtccaagatcgatcacctgaaaaccatgacgcaagaagat
ctgtggctcgattgctctcataaattgacctcgctcattcaacagatcatcgagttcgcc
aaaatgatacccggcttcatgaagctatcgcaggacgatcaaatcgtcctgctaaaagcg
gcttgctttgaattgtgcctattacgaatgacgcgctattttgacgctgaatcgaattgt
gtcttgtatggcgacaccctacttcctgaagacgtgttccacacctgcgatacactggaa
atcaagctcgttagcggcatcttcgaattggtcagatcgttggcgcgacttcagttgaac
gatacacagctagcgttgtattcggccttcgtgctcgtttcaccggaacggccaggtctt
aaggggacggcggagatcgaacgagtctcgtcagcccttttgaagtgcctgcgcatcgaa
gcgacgcgcgaacgacacctcggcattaccattaaaggcgatcaaggccttgttgagcat
ttgctgctccaactgccgaaactgcgtgatctatcgcgttgccatctcgaagcgctgtcc
aatctcaaattgcggagtccagcactacatatgccaccgctacacaaagaactattttcg
tctgatccctag
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